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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3541 O_BomoEE13188_5prime_partial:A_BomoEE_comp66754_c0_seq2
287bp
3542 O_BomoEE13189_complete:A_BomoEE_comp66754_c0_seq3
624bp
 PREDICTED:_Bloom_syndrome_protein_homolog_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000403 F Y-form DNA binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0000731 P DNA synthesis involved in DNA repair
GO:0000732 P strand displacement
GO:0000733 P obsolete DNA strand renaturation
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003824 F catalytic activity
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007131 P reciprocal meiotic recombination
GO:0008026 F helicase activity
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0009378 F four-way junction helicase activity
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0043140 F 3'-5' DNA helicase activity
GO:0044237 P cellular metabolic process
GO:0045003 P double-strand break repair via synthesis-dependent strand annealing
GO:1901291 P negative regulation of double-strand break repair via single-strand annealing
3543 O_BomoEE1318_5prime_partial:A_BomoEE_comp28785_c0_seq2
127bp
3544 O_BomoEE13190_5prime_partial:A_BomoEE_comp66754_c0_seq3
287bp
3545 O_BomoEE13191_complete:A_BomoEE_comp66755_c0_seq1
1041bp
 putative_Ofd1_protein_[Operophtera_brumata]
3546 O_BomoEE13192_5prime_partial:A_BomoEE_comp66756_c0_seq1
241bp
 Takeout/JHBP_like_protein_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005615 C extracellular space
GO:0007623 P circadian rhythm
GO:0032504 P multicellular organism reproduction
GO:0048511 P rhythmic process
3547 O_BomoEE13193_complete:A_BomoEE_comp66756_c0_seq4
136bp
 Circadian_clock-controlled_protein_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005615 C extracellular space
GO:0007623 P circadian rhythm
GO:0032504 P multicellular organism reproduction
GO:0048511 P rhythmic process
3548 O_BomoEE13194_complete:A_BomoEE_comp66756_c0_seq5
240bp
 hypothetical_protein_KGM_00533_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005615 C extracellular space
GO:0007623 P circadian rhythm
GO:0032504 P multicellular organism reproduction
GO:0048511 P rhythmic process
3549 O_BomoEE13195_3prime_partial:A_BomoEE_comp66757_c0_seq1
480bp
 PREDICTED:_exportin-6_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
3550 O_BomoEE13196_3prime_partial:A_BomoEE_comp66757_c0_seq2
496bp
 PREDICTED:_exportin-6_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
3551 O_BomoEE13197_complete:A_BomoEE_comp66759_c0_seq1
861bp
 PREDICTED:_focal_adhesion_kinase_1_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000226 P microtubule cytoskeleton organization
GO:0001525 P angiogenesis
GO:0001568 P blood vessel development
GO:0001570 P vasculogenesis
GO:0001725 C stress fiber
GO:0001764 P neuron migration
GO:0001890 P placenta development
GO:0001932 P regulation of protein phosphorylation
GO:0001934 P positive regulation of protein phosphorylation
GO:0003007 P heart morphogenesis
GO:0003779 F actin binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005088 F guanyl-nucleotide exchange factor activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0005938 C cell cortex
GO:0006468 P protein phosphorylation
GO:0006921 P cellular component disassembly involved in execution phase of apoptosis
GO:0007172 P signal complex assembly
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007229 P integrin-mediated signaling pathway
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0008284 P positive regulation of cell population proliferation
GO:0008360 P regulation of cell shape
GO:0008432 F JUN kinase binding
GO:0009790 P embryo development
GO:0010594 P regulation of endothelial cell migration
GO:0010632 P regulation of epithelial cell migration
GO:0014068 P positive regulation of phosphatidylinositol 3-kinase signaling
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016324 C apical plasma membrane
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019901 F protein kinase binding
GO:0021955 P central nervous system neuron axonogenesis
GO:0022408 P negative regulation of cell-cell adhesion
GO:0030010 P establishment of cell polarity
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030198 P extracellular matrix organization
GO:0030335 P positive regulation of cell migration
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0033628 P regulation of cell adhesion mediated by integrin
GO:0038007 P netrin-activated signaling pathway
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0038096 P Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0040023 P nuclear migration
GO:0042127 P regulation of cell population proliferation
GO:0042169 F SH2 domain binding
GO:0043066 P negative regulation of apoptotic process
GO:0043087 P regulation of GTPase activity
GO:0043542 P endothelial cell migration
GO:0043547 P positive regulation of GTPase activity
GO:0043552 P positive regulation of phosphatidylinositol 3-kinase activity
GO:0045087 P innate immune response
GO:0045667 P regulation of osteoblast differentiation
GO:0045860 P positive regulation of protein kinase activity
GO:0046621 P negative regulation of organ growth
GO:0046777 P protein autophosphorylation
GO:0048010 P vascular endothelial growth factor receptor signaling pathway
GO:0048013 P ephrin receptor signaling pathway
GO:0048870 P cell motility
GO:0050771 P negative regulation of axonogenesis
GO:0051493 P regulation of cytoskeleton organization
GO:0051893 P regulation of focal adhesion assembly
GO:0051897 P positive regulation of protein kinase B signaling
GO:0051964 P negative regulation of synapse assembly
GO:0060396 P growth hormone receptor signaling pathway
GO:0071560 P cellular response to transforming growth factor beta stimulus
GO:1900024 P regulation of substrate adhesion-dependent cell spreading
GO:2000060 P positive regulation of ubiquitin-dependent protein catabolic process
GO:2000811 P negative regulation of anoikis
3552 O_BomoEE13198_5prime_partial:A_BomoEE_comp66759_c0_seq1
141bp
3553 O_BomoEE13199_complete:A_BomoEE_comp66759_c0_seq1
106bp
3554 O_BomoEE1319_5prime_partial:A_BomoEE_comp28857_c0_seq1
230bp
 PREDICTED:_ski_oncogene_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0006351 P transcription, DNA-templated
GO:0046332 F SMAD binding
3555 O_BomoEE131_5prime_partial:A_BomoEE_comp2430_c0_seq2
112bp
 hypothetical_protein_KGM_21410_[Danaus_plexippus]
3556 O_BomoEE13200_complete:A_BomoEE_comp66759_c0_seq1
101bp
3557 O_BomoEE13201_3prime_partial:A_BomoEE_comp66759_c0_seq2
902bp
 PREDICTED:_focal_adhesion_kinase_1_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000226 P microtubule cytoskeleton organization
GO:0001525 P angiogenesis
GO:0001568 P blood vessel development
GO:0001570 P vasculogenesis
GO:0001725 C stress fiber
GO:0001764 P neuron migration
GO:0001890 P placenta development
GO:0001932 P regulation of protein phosphorylation
GO:0001934 P positive regulation of protein phosphorylation
GO:0003007 P heart morphogenesis
GO:0003779 F actin binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005088 F guanyl-nucleotide exchange factor activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0005938 C cell cortex
GO:0006468 P protein phosphorylation
GO:0006921 P cellular component disassembly involved in execution phase of apoptosis
GO:0007172 P signal complex assembly
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007229 P integrin-mediated signaling pathway
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0008284 P positive regulation of cell population proliferation
GO:0008360 P regulation of cell shape
GO:0008432 F JUN kinase binding
GO:0009790 P embryo development
GO:0010594 P regulation of endothelial cell migration
GO:0010632 P regulation of epithelial cell migration
GO:0014068 P positive regulation of phosphatidylinositol 3-kinase signaling
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016324 C apical plasma membrane
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019901 F protein kinase binding
GO:0021955 P central nervous system neuron axonogenesis
GO:0022408 P negative regulation of cell-cell adhesion
GO:0030010 P establishment of cell polarity
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030198 P extracellular matrix organization
GO:0030335 P positive regulation of cell migration
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0033628 P regulation of cell adhesion mediated by integrin
GO:0038007 P netrin-activated signaling pathway
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0038096 P Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0040023 P nuclear migration
GO:0042127 P regulation of cell population proliferation
GO:0042169 F SH2 domain binding
GO:0043066 P negative regulation of apoptotic process
GO:0043087 P regulation of GTPase activity
GO:0043542 P endothelial cell migration
GO:0043547 P positive regulation of GTPase activity
GO:0043552 P positive regulation of phosphatidylinositol 3-kinase activity
GO:0045087 P innate immune response
GO:0045667 P regulation of osteoblast differentiation
GO:0045860 P positive regulation of protein kinase activity
GO:0046621 P negative regulation of organ growth
GO:0046777 P protein autophosphorylation
GO:0048010 P vascular endothelial growth factor receptor signaling pathway
GO:0048013 P ephrin receptor signaling pathway
GO:0048870 P cell motility
GO:0050771 P negative regulation of axonogenesis
GO:0051493 P regulation of cytoskeleton organization
GO:0051893 P regulation of focal adhesion assembly
GO:0051897 P positive regulation of protein kinase B signaling
GO:0051964 P negative regulation of synapse assembly
GO:0060396 P growth hormone receptor signaling pathway
GO:0071560 P cellular response to transforming growth factor beta stimulus
GO:1900024 P regulation of substrate adhesion-dependent cell spreading
GO:2000060 P positive regulation of ubiquitin-dependent protein catabolic process
GO:2000811 P negative regulation of anoikis
3558 O_BomoEE13202_complete:A_BomoEE_comp66759_c0_seq2
153bp
3559 O_BomoEE13203_complete:A_BomoEE_comp66759_c0_seq2
106bp
3560 O_BomoEE13204_complete:A_BomoEE_comp66759_c0_seq2
101bp
3561 O_BomoEE13205_3prime_partial:A_BomoEE_comp66759_c0_seq3
928bp
 PREDICTED:_focal_adhesion_kinase_1_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000226 P microtubule cytoskeleton organization
GO:0001525 P angiogenesis
GO:0001568 P blood vessel development
GO:0001570 P vasculogenesis
GO:0001725 C stress fiber
GO:0001764 P neuron migration
GO:0001890 P placenta development
GO:0001932 P regulation of protein phosphorylation
GO:0001934 P positive regulation of protein phosphorylation
GO:0003007 P heart morphogenesis
GO:0003779 F actin binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005088 F guanyl-nucleotide exchange factor activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0005938 C cell cortex
GO:0006468 P protein phosphorylation
GO:0006921 P cellular component disassembly involved in execution phase of apoptosis
GO:0007172 P signal complex assembly
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007229 P integrin-mediated signaling pathway
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0008284 P positive regulation of cell population proliferation
GO:0008360 P regulation of cell shape
GO:0008432 F JUN kinase binding
GO:0009790 P embryo development
GO:0010594 P regulation of endothelial cell migration
GO:0010632 P regulation of epithelial cell migration
GO:0014068 P positive regulation of phosphatidylinositol 3-kinase signaling
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016324 C apical plasma membrane
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019901 F protein kinase binding
GO:0021955 P central nervous system neuron axonogenesis
GO:0022408 P negative regulation of cell-cell adhesion
GO:0030010 P establishment of cell polarity
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030198 P extracellular matrix organization
GO:0030335 P positive regulation of cell migration
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0033628 P regulation of cell adhesion mediated by integrin
GO:0038007 P netrin-activated signaling pathway
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0038096 P Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0040023 P nuclear migration
GO:0042127 P regulation of cell population proliferation
GO:0042169 F SH2 domain binding
GO:0043066 P negative regulation of apoptotic process
GO:0043087 P regulation of GTPase activity
GO:0043542 P endothelial cell migration
GO:0043547 P positive regulation of GTPase activity
GO:0043552 P positive regulation of phosphatidylinositol 3-kinase activity
GO:0045087 P innate immune response
GO:0045667 P regulation of osteoblast differentiation
GO:0045860 P positive regulation of protein kinase activity
GO:0046621 P negative regulation of organ growth
GO:0046777 P protein autophosphorylation
GO:0048010 P vascular endothelial growth factor receptor signaling pathway
GO:0048013 P ephrin receptor signaling pathway
GO:0048870 P cell motility
GO:0050771 P negative regulation of axonogenesis
GO:0051493 P regulation of cytoskeleton organization
GO:0051893 P regulation of focal adhesion assembly
GO:0051897 P positive regulation of protein kinase B signaling
GO:0051964 P negative regulation of synapse assembly
GO:0060396 P growth hormone receptor signaling pathway
GO:0071560 P cellular response to transforming growth factor beta stimulus
GO:1900024 P regulation of substrate adhesion-dependent cell spreading
GO:2000060 P positive regulation of ubiquitin-dependent protein catabolic process
GO:2000811 P negative regulation of anoikis
3562 O_BomoEE13206_complete:A_BomoEE_comp66759_c0_seq3
106bp
3563 O_BomoEE13207_complete:A_BomoEE_comp66759_c0_seq3
101bp
3564 O_BomoEE13208_complete:A_BomoEE_comp66763_c0_seq1
342bp
 PREDICTED:_uncharacterized_protein_LOC106139518_[Amyelois_transitella]
GO:0003824 F catalytic activity
GO:0003858 F 3-hydroxybutyrate dehydrogenase activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0099617 C matrix side of mitochondrial inner membrane
3565 O_BomoEE13209_complete:A_BomoEE_comp66763_c0_seq2
342bp
 PREDICTED:_uncharacterized_protein_LOC106139518_[Amyelois_transitella]
GO:0003824 F catalytic activity
GO:0003858 F 3-hydroxybutyrate dehydrogenase activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0099617 C matrix side of mitochondrial inner membrane
3566 O_BomoEE1320_complete:A_BomoEE_comp28857_c0_seq1
107bp
3567 O_BomoEE13210_complete:A_BomoEE_comp66766_c0_seq1
435bp
 PREDICTED:_abhydrolase_domain-containing_protein_2_[Papilio_machaon]
GO:0006629 P lipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016298 F lipase activity
GO:0016787 F hydrolase activity
GO:0022416 P chaeta development
GO:0035220 P wing disc development
GO:0052689 F carboxylic ester hydrolase activity
3568 O_BomoEE13211_complete:A_BomoEE_comp66766_c0_seq2
207bp
 PREDICTED:_abhydrolase_domain-containing_protein_2_[Papilio_machaon]
GO:0006629 P lipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016298 F lipase activity
GO:0016787 F hydrolase activity
GO:0022416 P chaeta development
GO:0035220 P wing disc development
GO:0052689 F carboxylic ester hydrolase activity
3569 O_BomoEE13212_3prime_partial:A_BomoEE_comp66769_c0_seq1
235bp
 FMRFamide_receptor_[Bombyx_mori]
GO:0001653 F peptide receptor activity
GO:0002209 P behavioral defense response
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0004985 F G protein-coupled opioid receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007204 P positive regulation of cytosolic calcium ion concentration
GO:0007218 P neuropeptide signaling pathway
GO:0008188 F neuropeptide receptor activity
GO:0008344 P adult locomotory behavior
GO:0008345 P larval locomotory behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0038003 P G protein-coupled opioid receptor signaling pathway
3570 O_BomoEE13213_5prime_partial:A_BomoEE_comp66769_c0_seq1
133bp
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