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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2761 O_BomoEE12486_internal:A_BomoEE_comp66000_c0_seq4
150bp
 PREDICTED:_ATP-dependent_Clp_protease_ATP-binding_subunit_clpX-like,_mitochondrial_isoform_X3_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0004176 F ATP-dependent peptidase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0006457 P protein folding
GO:0006508 P proteolysis
GO:0008150 P biological_process
GO:0009368 C endopeptidase Clp complex
GO:0009841 C mitochondrial endopeptidase Clp complex
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016887 F ATP hydrolysis activity
GO:0030163 P protein catabolic process
GO:0042645 C mitochondrial nucleoid
GO:0046872 F metal ion binding
GO:0051082 F unfolded protein binding
GO:0051603 P proteolysis involved in cellular protein catabolic process
2762 O_BomoEE12487_internal:A_BomoEE_comp66000_c0_seq4
150bp
 hypothetical_protein_Pav631_3585,_partial_[Pseudomonas_avellanae_BPIC_631]
2763 O_BomoEE12488_complete:A_BomoEE_comp66005_c0_seq1
520bp
 PREDICTED:_zinc_finger_protein_658B-like_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2764 O_BomoEE12489_complete:A_BomoEE_comp66006_c0_seq2
469bp
 PREDICTED:_tigger_transposable_element-derived_protein_6-like_[Acyrthosiphon_pisum]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
2765 O_BomoEE1248_5prime_partial:A_BomoEE_comp27631_c1_seq1
103bp
2766 O_BomoEE12490_5prime_partial:A_BomoEE_comp66010_c0_seq1
103bp
2767 O_BomoEE12491_5prime_partial:A_BomoEE_comp66014_c0_seq1
504bp
 PREDICTED:_formin-like_protein_CG32138_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0003779 F actin binding
GO:0005575 C cellular_component
GO:0016043 P cellular component organization
GO:0017048 F small GTPase binding
GO:0030036 P actin cytoskeleton organization
GO:0048812 P neuron projection morphogenesis
2768 O_BomoEE12492_complete:A_BomoEE_comp66014_c0_seq1
145bp
2769 O_BomoEE12493_complete:A_BomoEE_comp66016_c0_seq1
402bp
 PREDICTED:_tryptophan_2,3-dioxygenase_isoform_X2_[Bombyx_mori]
GO:0004833 F tryptophan 2,3-dioxygenase activity
GO:0005575 C cellular_component
GO:0006569 P tryptophan catabolic process
GO:0016491 F oxidoreductase activity
GO:0019441 P tryptophan catabolic process to kynurenine
GO:0019442 P tryptophan catabolic process to acetyl-CoA
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
2770 O_BomoEE12494_complete:A_BomoEE_comp66017_c0_seq1
267bp
 PREDICTED:_protein_disulfide-isomerase_TMX3_[Amyelois_transitella]
GO:0003756 F protein disulfide isomerase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006457 P protein folding
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016853 F isomerase activity
GO:0045454 P cell redox homeostasis
2771 O_BomoEE12495_complete:A_BomoEE_comp66017_c0_seq1
171bp
 PREDICTED:_protein_disulfide-isomerase_TMX3_[Amyelois_transitella]
GO:0003756 F protein disulfide isomerase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006457 P protein folding
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016853 F isomerase activity
GO:0045454 P cell redox homeostasis
2772 O_BomoEE12496_complete:A_BomoEE_comp66017_c0_seq2
426bp
 PREDICTED:_protein_disulfide-isomerase_TMX3_[Amyelois_transitella]
GO:0003756 F protein disulfide isomerase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006457 P protein folding
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016853 F isomerase activity
GO:0045454 P cell redox homeostasis
2773 O_BomoEE12497_complete:A_BomoEE_comp66017_c0_seq3
267bp
 PREDICTED:_protein_disulfide-isomerase_TMX3_[Amyelois_transitella]
GO:0003756 F protein disulfide isomerase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006457 P protein folding
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016853 F isomerase activity
GO:0045454 P cell redox homeostasis
2774 O_BomoEE12498_complete:A_BomoEE_comp66017_c0_seq3
171bp
 PREDICTED:_protein_disulfide-isomerase_TMX3_[Amyelois_transitella]
GO:0003756 F protein disulfide isomerase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006457 P protein folding
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016853 F isomerase activity
GO:0045454 P cell redox homeostasis
2775 O_BomoEE12499_complete:A_BomoEE_comp66017_c0_seq4
426bp
 PREDICTED:_protein_disulfide-isomerase_TMX3_[Amyelois_transitella]
GO:0003756 F protein disulfide isomerase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006457 P protein folding
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016853 F isomerase activity
GO:0045454 P cell redox homeostasis
2776 O_BomoEE1249_complete:A_BomoEE_comp27645_c0_seq1
104bp
2777 O_BomoEE124_3prime_partial:A_BomoEE_comp2174_c0_seq1
135bp
 hypothetical_protein_LOTGIDRAFT_148807,_partial_[Lottia_gigantea]
2778 O_BomoEE12500_complete:A_BomoEE_comp66018_c0_seq3
582bp
 PREDICTED:_protein-glutamate_O-methyltransferase-like_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0006479 P protein methylation
GO:0008168 F methyltransferase activity
GO:0008757 F S-adenosylmethionine-dependent methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0051998 F protein carboxyl O-methyltransferase activity
GO:2001020 P regulation of response to DNA damage stimulus
2779 O_BomoEE12501_complete:A_BomoEE_comp66018_c0_seq4
324bp
 PREDICTED:_protein-glutamate_O-methyltransferase-like_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0006479 P protein methylation
GO:0008168 F methyltransferase activity
GO:0008757 F S-adenosylmethionine-dependent methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0051998 F protein carboxyl O-methyltransferase activity
GO:2001020 P regulation of response to DNA damage stimulus
2780 O_BomoEE12502_complete:A_BomoEE_comp66018_c0_seq5
321bp
 PREDICTED:_protein-glutamate_O-methyltransferase-like_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0006479 P protein methylation
GO:0008168 F methyltransferase activity
GO:0008757 F S-adenosylmethionine-dependent methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0051998 F protein carboxyl O-methyltransferase activity
GO:2001020 P regulation of response to DNA damage stimulus
2781 O_BomoEE12503_complete:A_BomoEE_comp66024_c0_seq1
197bp
 PREDICTED:_doublesex-_and_mab-3-related_transcription_factor_2_[Amyelois_transitella]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000987 F cis-regulatory region sequence-specific DNA binding
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007548 P sex differentiation
GO:0008150 P biological_process
GO:0014807 P regulation of somitogenesis
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048706 P embryonic skeletal system development
GO:2000287 P positive regulation of myotome development
2782 O_BomoEE12504_complete:A_BomoEE_comp66024_c0_seq2
194bp
 PREDICTED:_doublesex-_and_mab-3-related_transcription_factor_2_[Amyelois_transitella]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000987 F cis-regulatory region sequence-specific DNA binding
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007548 P sex differentiation
GO:0008150 P biological_process
GO:0014807 P regulation of somitogenesis
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048706 P embryonic skeletal system development
GO:2000287 P positive regulation of myotome development
2783 O_BomoEE12505_complete:A_BomoEE_comp66024_c0_seq3
194bp
 PREDICTED:_doublesex-_and_mab-3-related_transcription_factor_2_[Amyelois_transitella]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000987 F cis-regulatory region sequence-specific DNA binding
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007548 P sex differentiation
GO:0008150 P biological_process
GO:0014807 P regulation of somitogenesis
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048706 P embryonic skeletal system development
GO:2000287 P positive regulation of myotome development
2784 O_BomoEE12506_complete:A_BomoEE_comp66030_c0_seq1
487bp
 PREDICTED:_putative_inorganic_phosphate_cotransporter_[Amyelois_transitella]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006820 P anion transport
GO:0015114 F phosphate ion transmembrane transporter activity
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0035435 P phosphate ion transmembrane transport
GO:0055085 P transmembrane transport
2785 O_BomoEE12507_complete:A_BomoEE_comp66034_c0_seq1
749bp
 PREDICTED:_exocyst_complex_component_3_[Bombyx_mori]
GO:0000145 C exocyst
GO:0000149 F SNARE binding
GO:0005737 C cytoplasm
GO:0005915 C zonula adherens
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0007009 P plasma membrane organization
GO:0007269 P neurotransmitter secretion
GO:0007298 P border follicle cell migration
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016028 C rhabdomere
GO:0016080 P synaptic vesicle targeting
GO:0016081 P synaptic vesicle docking
GO:0016192 P vesicle-mediated transport
GO:0030707 P ovarian follicle cell development
GO:0032456 P endocytic recycling
GO:0043001 P Golgi to plasma membrane protein transport
GO:0045313 P rhabdomere membrane biogenesis
GO:0072659 P protein localization to plasma membrane
GO:0072697 P protein localization to cell cortex
GO:0098793 C presynapse
2786 O_BomoEE12508_complete:A_BomoEE_comp66034_c0_seq1
136bp
2787 O_BomoEE12509_3prime_partial:A_BomoEE_comp66037_c0_seq1
165bp
 PREDICTED:_D-glucuronyl_C5-epimerase_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0015012 P heparan sulfate proteoglycan biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016853 F isomerase activity
GO:0016857 F racemase and epimerase activity, acting on carbohydrates and derivatives
GO:0030210 P heparin biosynthetic process
GO:0047464 F heparosan-N-sulfate-glucuronate 5-epimerase activity
GO:0050379 F UDP-glucuronate 5'-epimerase activity
2788 O_BomoEE1250_complete:A_BomoEE_comp27655_c0_seq1
469bp
 PREDICTED:_uncharacterized_protein_LOC106137701_[Amyelois_transitella]
2789 O_BomoEE12510_complete:A_BomoEE_comp66037_c0_seq1
112bp
2790 O_BomoEE12511_3prime_partial:A_BomoEE_comp66037_c0_seq2
364bp
 PREDICTED:_D-glucuronyl_C5-epimerase_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0015012 P heparan sulfate proteoglycan biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016853 F isomerase activity
GO:0016857 F racemase and epimerase activity, acting on carbohydrates and derivatives
GO:0030210 P heparin biosynthetic process
GO:0047464 F heparosan-N-sulfate-glucuronate 5-epimerase activity
GO:0050379 F UDP-glucuronate 5'-epimerase activity
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