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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2731 O_BomoEE12459_complete:A_BomoEE_comp65974_c0_seq2
105bp
2732 O_BomoEE1245_complete:A_BomoEE_comp27593_c0_seq1
126bp
 hypothetical_protein_KGM_16900_[Danaus_plexippus]
2733 O_BomoEE12460_3prime_partial:A_BomoEE_comp65974_c0_seq3
104bp
 NADPH_cytochrome_P450_reductase_[Bombyx_mori]
GO:0003958 F NADPH-hemoprotein reductase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0010181 F FMN binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
2734 O_BomoEE12461_5prime_partial:A_BomoEE_comp65974_c0_seq4
591bp
 NADPH_cytochrome_P450_reductase_[Bombyx_mori]
GO:0003958 F NADPH-hemoprotein reductase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005811 C lipid droplet
GO:0008150 P biological_process
GO:0010181 F FMN binding
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0030586 F [methionine synthase] reductase activity
GO:0055114 P obsolete oxidation-reduction process
2735 O_BomoEE12462_complete:A_BomoEE_comp65974_c0_seq4
117bp
2736 O_BomoEE12463_complete:A_BomoEE_comp65974_c0_seq4
105bp
2737 O_BomoEE12464_complete:A_BomoEE_comp65977_c0_seq1
267bp
 PREDICTED:_DNA_repair_protein_RAD51_homolog_4_isoform_X2_[Bombyx_mori]
GO:0000150 F DNA strand exchange activity
GO:0000166 F nucleotide binding
GO:0000400 F four-way junction DNA binding
GO:0000707 P meiotic DNA recombinase assembly
GO:0000722 P telomere maintenance via recombination
GO:0000723 P telomere maintenance
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004520 F endodeoxyribonuclease activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005657 C replication fork
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006310 P DNA recombination
GO:0006312 P mitotic recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007131 P reciprocal meiotic recombination
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0010212 P response to ionizing radiation
GO:0033063 C Rad51B-Rad51C-Rad51D-XRCC2 complex
GO:0036297 P interstrand cross-link repair
GO:0042148 P strand invasion
GO:0043015 F gamma-tubulin binding
GO:0051276 P chromosome organization
GO:0051726 P regulation of cell cycle
2738 O_BomoEE12465_complete:A_BomoEE_comp65977_c0_seq2
171bp
 PREDICTED:_DNA_repair_protein_RAD51_homolog_4_isoform_X2_[Bombyx_mori]
2739 O_BomoEE12466_complete:A_BomoEE_comp65977_c0_seq2
126bp
 PREDICTED:_DNA_repair_protein_RAD51_homolog_4_isoform_X2_[Bombyx_mori]
GO:0000150 F DNA strand exchange activity
GO:0000166 F nucleotide binding
GO:0000400 F four-way junction DNA binding
GO:0000707 P meiotic DNA recombinase assembly
GO:0000723 P telomere maintenance
GO:0000724 P double-strand break repair via homologous recombination
GO:0000731 P DNA synthesis involved in DNA repair
GO:0000732 P strand displacement
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004520 F endodeoxyribonuclease activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005657 C replication fork
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006310 P DNA recombination
GO:0006312 P mitotic recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007131 P reciprocal meiotic recombination
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0010212 P response to ionizing radiation
GO:0033063 C Rad51B-Rad51C-Rad51D-XRCC2 complex
GO:0036297 P interstrand cross-link repair
GO:0042148 P strand invasion
GO:0043015 F gamma-tubulin binding
GO:0051276 P chromosome organization
GO:0051726 P regulation of cell cycle
2740 O_BomoEE12467_complete:A_BomoEE_comp65977_c0_seq3
270bp
 PREDICTED:_DNA_repair_protein_RAD51_homolog_4_isoform_X2_[Bombyx_mori]
GO:0000150 F DNA strand exchange activity
GO:0000166 F nucleotide binding
GO:0000400 F four-way junction DNA binding
GO:0000707 P meiotic DNA recombinase assembly
GO:0000723 P telomere maintenance
GO:0000724 P double-strand break repair via homologous recombination
GO:0000731 P DNA synthesis involved in DNA repair
GO:0000732 P strand displacement
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004520 F endodeoxyribonuclease activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005657 C replication fork
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006310 P DNA recombination
GO:0006312 P mitotic recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007131 P reciprocal meiotic recombination
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0010212 P response to ionizing radiation
GO:0033063 C Rad51B-Rad51C-Rad51D-XRCC2 complex
GO:0036297 P interstrand cross-link repair
GO:0042148 P strand invasion
GO:0043015 F gamma-tubulin binding
GO:0051276 P chromosome organization
GO:0051726 P regulation of cell cycle
2741 O_BomoEE12468_complete:A_BomoEE_comp65977_c0_seq4
171bp
 PREDICTED:_DNA_repair_protein_RAD51_homolog_4_isoform_X2_[Bombyx_mori]
2742 O_BomoEE12469_complete:A_BomoEE_comp65977_c0_seq5
126bp
 PREDICTED:_DNA_repair_protein_RAD51_homolog_4_isoform_X2_[Bombyx_mori]
GO:0000150 F DNA strand exchange activity
GO:0000166 F nucleotide binding
GO:0000400 F four-way junction DNA binding
GO:0000707 P meiotic DNA recombinase assembly
GO:0000723 P telomere maintenance
GO:0000724 P double-strand break repair via homologous recombination
GO:0000731 P DNA synthesis involved in DNA repair
GO:0000732 P strand displacement
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004520 F endodeoxyribonuclease activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005657 C replication fork
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006310 P DNA recombination
GO:0006312 P mitotic recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007131 P reciprocal meiotic recombination
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0010212 P response to ionizing radiation
GO:0033063 C Rad51B-Rad51C-Rad51D-XRCC2 complex
GO:0036297 P interstrand cross-link repair
GO:0042148 P strand invasion
GO:0043015 F gamma-tubulin binding
GO:0051276 P chromosome organization
GO:0051726 P regulation of cell cycle
2743 O_BomoEE1246_complete:A_BomoEE_comp27614_c0_seq1
363bp
 PREDICTED:_protein_kinase_DC2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004691 F cAMP-dependent protein kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005952 C cAMP-dependent protein kinase complex
GO:0006468 P protein phosphorylation
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
2744 O_BomoEE12470_complete:A_BomoEE_comp65977_c0_seq6
172bp
 PREDICTED:_DNA_repair_protein_RAD51_homolog_4_isoform_X2_[Bombyx_mori]
GO:0000150 F DNA strand exchange activity
GO:0000166 F nucleotide binding
GO:0000400 F four-way junction DNA binding
GO:0000707 P meiotic DNA recombinase assembly
GO:0000723 P telomere maintenance
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004520 F endodeoxyribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005657 C replication fork
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006310 P DNA recombination
GO:0006312 P mitotic recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007131 P reciprocal meiotic recombination
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0010212 P response to ionizing radiation
GO:0033063 C Rad51B-Rad51C-Rad51D-XRCC2 complex
GO:0036297 P interstrand cross-link repair
GO:0042148 P strand invasion
GO:0043015 F gamma-tubulin binding
GO:0051276 P chromosome organization
GO:0051726 P regulation of cell cycle
2745 O_BomoEE12471_complete:A_BomoEE_comp65977_c0_seq7
243bp
 PREDICTED:_DNA_repair_protein_RAD51_homolog_4_isoform_X2_[Bombyx_mori]
GO:0000150 F DNA strand exchange activity
GO:0000166 F nucleotide binding
GO:0000400 F four-way junction DNA binding
GO:0000707 P meiotic DNA recombinase assembly
GO:0000722 P telomere maintenance via recombination
GO:0000723 P telomere maintenance
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004520 F endodeoxyribonuclease activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005657 C replication fork
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006310 P DNA recombination
GO:0006312 P mitotic recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007131 P reciprocal meiotic recombination
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0010212 P response to ionizing radiation
GO:0033063 C Rad51B-Rad51C-Rad51D-XRCC2 complex
GO:0036297 P interstrand cross-link repair
GO:0042148 P strand invasion
GO:0043015 F gamma-tubulin binding
GO:0051276 P chromosome organization
GO:0051726 P regulation of cell cycle
2746 O_BomoEE12472_complete:A_BomoEE_comp65977_c0_seq8
341bp
 PREDICTED:_DNA_repair_protein_RAD51_homolog_4_isoform_X2_[Bombyx_mori]
GO:0000150 F DNA strand exchange activity
GO:0000166 F nucleotide binding
GO:0000400 F four-way junction DNA binding
GO:0000707 P meiotic DNA recombinase assembly
GO:0000722 P telomere maintenance via recombination
GO:0000723 P telomere maintenance
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004520 F endodeoxyribonuclease activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005657 C replication fork
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006310 P DNA recombination
GO:0006312 P mitotic recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007131 P reciprocal meiotic recombination
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0010212 P response to ionizing radiation
GO:0033063 C Rad51B-Rad51C-Rad51D-XRCC2 complex
GO:0036297 P interstrand cross-link repair
GO:0042148 P strand invasion
GO:0043015 F gamma-tubulin binding
GO:0051276 P chromosome organization
GO:0051726 P regulation of cell cycle
2747 O_BomoEE12473_complete:A_BomoEE_comp65977_c0_seq10
126bp
 PREDICTED:_DNA_repair_protein_RAD51_homolog_4_isoform_X2_[Bombyx_mori]
GO:0000150 F DNA strand exchange activity
GO:0000166 F nucleotide binding
GO:0000400 F four-way junction DNA binding
GO:0000707 P meiotic DNA recombinase assembly
GO:0000723 P telomere maintenance
GO:0000724 P double-strand break repair via homologous recombination
GO:0000731 P DNA synthesis involved in DNA repair
GO:0000732 P strand displacement
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004520 F endodeoxyribonuclease activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005657 C replication fork
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006310 P DNA recombination
GO:0006312 P mitotic recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007131 P reciprocal meiotic recombination
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0010212 P response to ionizing radiation
GO:0033063 C Rad51B-Rad51C-Rad51D-XRCC2 complex
GO:0036297 P interstrand cross-link repair
GO:0042148 P strand invasion
GO:0043015 F gamma-tubulin binding
GO:0051276 P chromosome organization
GO:0051726 P regulation of cell cycle
2748 O_BomoEE12474_complete:A_BomoEE_comp65977_c0_seq10
100bp
 PREDICTED:_DNA_repair_protein_RAD51_homolog_4_isoform_X2_[Bombyx_mori]
2749 O_BomoEE12475_complete:A_BomoEE_comp65977_c0_seq11
100bp
 PREDICTED:_DNA_repair_protein_RAD51_homolog_4_isoform_X2_[Bombyx_mori]
2750 O_BomoEE12476_complete:A_BomoEE_comp65977_c0_seq12
169bp
 PREDICTED:_DNA_repair_protein_RAD51_homolog_4_isoform_X2_[Bombyx_mori]
GO:0000150 F DNA strand exchange activity
GO:0000166 F nucleotide binding
GO:0000400 F four-way junction DNA binding
GO:0000707 P meiotic DNA recombinase assembly
GO:0000722 P telomere maintenance via recombination
GO:0000723 P telomere maintenance
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004520 F endodeoxyribonuclease activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005657 C replication fork
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006310 P DNA recombination
GO:0006312 P mitotic recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007131 P reciprocal meiotic recombination
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0010212 P response to ionizing radiation
GO:0033063 C Rad51B-Rad51C-Rad51D-XRCC2 complex
GO:0036297 P interstrand cross-link repair
GO:0042148 P strand invasion
GO:0043015 F gamma-tubulin binding
GO:0051276 P chromosome organization
GO:0051726 P regulation of cell cycle
2751 O_BomoEE12477_5prime_partial:A_BomoEE_comp65992_c0_seq1
126bp
2752 O_BomoEE12478_complete:A_BomoEE_comp65995_c0_seq1
328bp
 PREDICTED:_zinc_finger_protein_596-like_[Papilio_xuthus]
GO:0001702 P gastrulation with mouth forming second
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007398 P ectoderm development
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903955 P positive regulation of protein targeting to mitochondrion
2753 O_BomoEE12479_complete:A_BomoEE_comp65995_c0_seq2
328bp
 PREDICTED:_zinc_finger_protein_596-like_[Papilio_xuthus]
GO:0001702 P gastrulation with mouth forming second
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007398 P ectoderm development
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903955 P positive regulation of protein targeting to mitochondrion
2754 O_BomoEE1247_complete:A_BomoEE_comp27614_c0_seq1
105bp
2755 O_BomoEE12480_complete:A_BomoEE_comp65995_c0_seq3
244bp
 PREDICTED:_protein_FRA10AC1_homolog_isoform_X2_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0008150 P biological_process
2756 O_BomoEE12481_3prime_partial:A_BomoEE_comp65997_c0_seq1
295bp
 30K_protein_20,_partial_[Bombyx_mori]
GO:0005576 C extracellular region
2757 O_BomoEE12482_internal:A_BomoEE_comp66000_c0_seq2
142bp
2758 O_BomoEE12483_5prime_partial:A_BomoEE_comp66000_c0_seq2
120bp
 Uncharacterised_protein_[Vibrio_cholerae]
2759 O_BomoEE12484_3prime_partial:A_BomoEE_comp66000_c0_seq2
101bp
 PREDICTED:_ATP-dependent_Clp_protease_ATP-binding_subunit_clpX-like,_mitochondrial_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0004176 F ATP-dependent peptidase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0006457 P protein folding
GO:0009368 C endopeptidase Clp complex
GO:0009841 C mitochondrial endopeptidase Clp complex
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016887 F ATP hydrolysis activity
GO:0042645 C mitochondrial nucleoid
GO:0046872 F metal ion binding
GO:0051082 F unfolded protein binding
GO:0051603 P proteolysis involved in cellular protein catabolic process
2760 O_BomoEE12485_internal:A_BomoEE_comp66000_c0_seq4
151bp
 Uncharacterised_protein_[Mycobacterium_tuberculosis]
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