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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2551 O_BomoEE12297_complete:A_BomoEE_comp65854_c0_seq1
108bp
2552 O_BomoEE12298_complete:A_BomoEE_comp65854_c0_seq1
108bp
2553 O_BomoEE12299_complete:A_BomoEE_comp65855_c0_seq1
107bp
2554 O_BomoEE1229_complete:A_BomoEE_comp27345_c0_seq2
132bp
 PREDICTED:_intraflagellar_transport_protein_20_homolog_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005930 C axoneme
GO:0030030 P cell projection organization
GO:0030992 C intraciliary transport particle B
GO:0034067 P protein localization to Golgi apparatus
GO:0036064 C ciliary basal body
GO:0042073 P intraciliary transport
GO:0042384 P cilium assembly
GO:0051642 P centrosome localization
GO:0061512 P protein localization to cilium
2555 O_BomoEE122_5prime_partial:A_BomoEE_comp2088_c0_seq2
105bp
2556 O_BomoEE12300_complete:A_BomoEE_comp65857_c0_seq1
125bp
 PREDICTED:_MIT_domain-containing_protein_1-like_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0000920 P septum digestion after cytokinesis
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0019904 F protein domain specific binding
GO:0030496 C midbody
GO:0031902 C late endosome membrane
GO:0032091 P negative regulation of protein binding
GO:0035091 F phosphatidylinositol binding
GO:0039702 P viral budding via host ESCRT complex
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0051301 P cell division
GO:0070062 C extracellular exosome
GO:0071985 P multivesicular body sorting pathway
2557 O_BomoEE12301_complete:A_BomoEE_comp65857_c0_seq1
109bp
2558 O_BomoEE12302_complete:A_BomoEE_comp65857_c0_seq2
124bp
 PREDICTED:_MIT_domain-containing_protein_1-like_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0000920 P septum digestion after cytokinesis
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0019904 F protein domain specific binding
GO:0030496 C midbody
GO:0031902 C late endosome membrane
GO:0032091 P negative regulation of protein binding
GO:0035091 F phosphatidylinositol binding
GO:0039702 P viral budding via host ESCRT complex
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0051301 P cell division
GO:0070062 C extracellular exosome
GO:0071985 P multivesicular body sorting pathway
2559 O_BomoEE12303_complete:A_BomoEE_comp65857_c0_seq2
109bp
2560 O_BomoEE12304_complete:A_BomoEE_comp65857_c0_seq3
243bp
 PREDICTED:_MIT_domain-containing_protein_1-like_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0000920 P septum digestion after cytokinesis
GO:0005768 C endosome
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0019904 F protein domain specific binding
GO:0030496 C midbody
GO:0031902 C late endosome membrane
GO:0032091 P negative regulation of protein binding
GO:0035091 F phosphatidylinositol binding
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0051301 P cell division
GO:0070062 C extracellular exosome
2561 O_BomoEE12305_complete:A_BomoEE_comp65857_c0_seq3
109bp
2562 O_BomoEE12306_complete:A_BomoEE_comp65858_c0_seq1
199bp
 ADP-ribosylation_factor-like_6_interacting_protein_[Bombyx_mori]
GO:0002038 P positive regulation of L-glutamate import across plasma membrane
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005784 C Sec61 translocon complex
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0006613 P cotranslational protein targeting to membrane
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0043066 P negative regulation of apoptotic process
GO:0043154 P negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0071787 P endoplasmic reticulum tubular network formation
GO:1990809 P endoplasmic reticulum tubular network membrane organization
2563 O_BomoEE12307_complete:A_BomoEE_comp65858_c0_seq1
137bp
 PREDICTED:_fatty_acid-binding_protein_12-like_[Amyelois_transitella]
GO:0005215 F transporter activity
GO:0005504 F fatty acid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0008289 F lipid binding
GO:0050727 P regulation of inflammatory response
2564 O_BomoEE12308_complete:A_BomoEE_comp65858_c0_seq2
142bp
 ADP-ribosylation_factor-like_6_interacting_protein_[Bombyx_mori]
GO:0002038 P positive regulation of L-glutamate import across plasma membrane
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005784 C Sec61 translocon complex
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0006613 P cotranslational protein targeting to membrane
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0043066 P negative regulation of apoptotic process
GO:0043154 P negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0071787 P endoplasmic reticulum tubular network formation
GO:1990809 P endoplasmic reticulum tubular network membrane organization
2565 O_BomoEE12309_complete:A_BomoEE_comp65858_c0_seq3
199bp
 ADP-ribosylation_factor-like_6_interacting_protein_[Bombyx_mori]
GO:0002038 P positive regulation of L-glutamate import across plasma membrane
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005784 C Sec61 translocon complex
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0006613 P cotranslational protein targeting to membrane
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0043066 P negative regulation of apoptotic process
GO:0043154 P negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0071787 P endoplasmic reticulum tubular network formation
GO:1990809 P endoplasmic reticulum tubular network membrane organization
2566 O_BomoEE1230_complete:A_BomoEE_comp27397_c0_seq1
253bp
 PREDICTED:_uncharacterized_protein_LOC106107340_isoform_X1_[Papilio_polytes]
2567 O_BomoEE12310_complete:A_BomoEE_comp65858_c0_seq4
142bp
 ADP-ribosylation_factor-like_6_interacting_protein_[Bombyx_mori]
GO:0002038 P positive regulation of L-glutamate import across plasma membrane
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005784 C Sec61 translocon complex
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0006613 P cotranslational protein targeting to membrane
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0043066 P negative regulation of apoptotic process
GO:0043154 P negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0071787 P endoplasmic reticulum tubular network formation
GO:1990809 P endoplasmic reticulum tubular network membrane organization
2568 O_BomoEE12311_complete:A_BomoEE_comp65858_c0_seq4
137bp
 PREDICTED:_fatty_acid-binding_protein_12-like_[Amyelois_transitella]
GO:0005215 F transporter activity
GO:0005504 F fatty acid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0008289 F lipid binding
GO:0050727 P regulation of inflammatory response
2569 O_BomoEE12312_complete:A_BomoEE_comp65859_c0_seq1
522bp
 PREDICTED:_tyrosine-protein_kinase_Src64B_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007254 P JNK cascade
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007300 P ovarian nurse cell to oocyte transport
GO:0007301 P female germline ring canal formation
GO:0007349 P cellularization
GO:0007391 P dorsal closure
GO:0007411 P axon guidance
GO:0007424 P open tracheal system development
GO:0007435 P salivary gland morphogenesis
GO:0007611 P learning or memory
GO:0007616 P long-term memory
GO:0008064 P regulation of actin polymerization or depolymerization
GO:0008302 P female germline ring canal formation, actin assembly
GO:0008335 P female germline ring canal stabilization
GO:0008355 P olfactory learning
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016319 P mushroom body development
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030036 P actin cytoskeleton organization
GO:0030046 P parallel actin filament bundle assembly
GO:0030708 P germarium-derived female germ-line cyst encapsulation
GO:0030717 P oocyte karyosome formation
GO:0030723 P ovarian fusome organization
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0034332 P adherens junction organization
GO:0036058 P filtration diaphragm assembly
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0045087 P innate immune response
GO:0045172 C germline ring canal
GO:0045860 P positive regulation of protein kinase activity
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0048477 P oogenesis
GO:0090136 P epithelial cell-cell adhesion
2570 O_BomoEE12313_complete:A_BomoEE_comp65861_c0_seq1
1636bp
 putative_laminin_A_chain_[Danaus_plexippus]
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
GO:0007435 P salivary gland morphogenesis
GO:0007494 P midgut development
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0012505 C endomembrane system
GO:0031012 C extracellular matrix
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0048598 P embryonic morphogenesis
GO:0048731 P system development
GO:0061031 P endodermal digestive tract morphogenesis
GO:0070831 P basement membrane assembly
GO:0085029 P extracellular matrix assembly
2571 O_BomoEE12314_complete:A_BomoEE_comp65861_c0_seq1
196bp
2572 O_BomoEE12315_complete:A_BomoEE_comp65861_c0_seq1
153bp
2573 O_BomoEE12316_complete:A_BomoEE_comp65861_c0_seq1
143bp
2574 O_BomoEE12317_complete:A_BomoEE_comp65861_c0_seq1
130bp
2575 O_BomoEE12318_complete:A_BomoEE_comp65861_c0_seq1
112bp
2576 O_BomoEE12319_complete:A_BomoEE_comp65861_c0_seq1
102bp
2577 O_BomoEE1231_5prime_partial:A_BomoEE_comp27399_c0_seq1
111bp
 RNA-binding_protein_Musashi-like_Rbp6_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003729 F mRNA binding
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0008266 F poly(U) RNA binding
GO:0048864 P stem cell development
2578 O_BomoEE12320_complete:A_BomoEE_comp65871_c0_seq1
142bp
 PREDICTED:_TFIIH_basal_transcription_factor_complex_helicase_XPD_subunit_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000439 C transcription factor TFIIH core complex
GO:0001666 P response to hypoxia
GO:0001701 P in utero embryonic development
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0006979 P response to oxidative stress
GO:0007059 P chromosome segregation
GO:0007568 P aging
GO:0008022 F protein C-terminus binding
GO:0008026 F helicase activity
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008283 P cell population proliferation
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0009411 P response to UV
GO:0009650 P UV protection
GO:0009791 P post-embryonic development
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0019907 C cyclin-dependent protein kinase activating kinase holoenzyme complex
GO:0021510 P spinal cord development
GO:0022405 P hair cycle process
GO:0030198 P extracellular matrix organization
GO:0030282 P bone mineralization
GO:0032289 P central nervous system myelin formation
GO:0032508 P DNA duplex unwinding
GO:0033683 P nucleotide-excision repair, DNA incision
GO:0035264 P multicellular organism growth
GO:0035315 P hair cell differentiation
GO:0040016 P embryonic cleavage
GO:0043139 F 5'-3' DNA helicase activity
GO:0043249 P erythrocyte maturation
GO:0043388 P positive regulation of DNA binding
GO:0043588 P skin development
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0048820 P hair follicle maturation
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0060218 P hematopoietic stem cell differentiation
GO:0071817 C MMXD complex
GO:1901990 P regulation of mitotic cell cycle phase transition
2579 O_BomoEE12321_5prime_partial:A_BomoEE_comp65871_c0_seq1
109bp
2580 O_BomoEE12322_complete:A_BomoEE_comp65871_c0_seq2
761bp
 PREDICTED:_TFIIH_basal_transcription_factor_complex_helicase_XPD_subunit_isoform_X1_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0006979 P response to oxidative stress
GO:0007059 P chromosome segregation
GO:0008022 F protein C-terminus binding
GO:0008026 F helicase activity
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0019907 C cyclin-dependent protein kinase activating kinase holoenzyme complex
GO:0032508 P DNA duplex unwinding
GO:0033683 P nucleotide-excision repair, DNA incision
GO:0035315 P hair cell differentiation
GO:0043139 F 5'-3' DNA helicase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0071817 C MMXD complex
GO:1901990 P regulation of mitotic cell cycle phase transition
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