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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2521 O_BomoEE1226_internal:A_BomoEE_comp27267_c0_seq1
132bp
 hypothetical_protein_KGM_05659_[Danaus_plexippus]
GO:0005509 F calcium ion binding
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0043235 C receptor complex
2522 O_BomoEE12270_3prime_partial:A_BomoEE_comp65827_c0_seq3
208bp
 PREDICTED:_N-acetylneuraminate_lyase-like_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0008747 F N-acetylneuraminate lyase activity
GO:0016829 F lyase activity
GO:0019262 P N-acetylneuraminate catabolic process
2523 O_BomoEE12271_complete:A_BomoEE_comp65827_c0_seq4
161bp
 PREDICTED:_N-acetylneuraminate_lyase-like_[Bombyx_mori]
2524 O_BomoEE12272_complete:A_BomoEE_comp65828_c0_seq1
116bp
2525 O_BomoEE12273_complete:A_BomoEE_comp65829_c0_seq2
225bp
 PREDICTED:_uncharacterized_protein_LOC106131149_[Amyelois_transitella]
GO:0005031 F tumor necrosis factor-activated receptor activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006915 P apoptotic process
GO:0007166 P cell surface receptor signaling pathway
GO:0007399 P nervous system development
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033209 P tumor necrosis factor-mediated signaling pathway
GO:0070050 P neuron cellular homeostasis
GO:0072499 P photoreceptor cell axon guidance
GO:1900074 P negative regulation of neuromuscular synaptic transmission
2526 O_BomoEE12274_complete:A_BomoEE_comp65829_c0_seq5
119bp
 PREDICTED:_uncharacterized_protein_LOC106131149_[Amyelois_transitella]
GO:0005031 F tumor necrosis factor-activated receptor activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006915 P apoptotic process
GO:0007166 P cell surface receptor signaling pathway
GO:0007399 P nervous system development
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033209 P tumor necrosis factor-mediated signaling pathway
GO:0070050 P neuron cellular homeostasis
GO:0072499 P photoreceptor cell axon guidance
GO:1900074 P negative regulation of neuromuscular synaptic transmission
2527 O_BomoEE12275_complete:A_BomoEE_comp65832_c0_seq1
572bp
 PREDICTED:_serine/threonine-protein_kinase_PAK_3_isoform_X1_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000187 P obsolete activation of MAPK activity
GO:0000278 P mitotic cell cycle
GO:0003824 F catalytic activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0004708 F MAP kinase kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0006468 P protein phosphorylation
GO:0007275 P multicellular organism development
GO:0007409 P axonogenesis
GO:0008152 P metabolic process
GO:0010763 P positive regulation of fibroblast migration
GO:0010975 P regulation of neuron projection development
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016358 P dendrite development
GO:0016740 F transferase activity
GO:0017048 F small GTPase binding
GO:0017124 F SH3 domain binding
GO:0030833 P regulation of actin filament polymerization
GO:0032956 P regulation of actin cytoskeleton organization
GO:0035556 P intracellular signal transduction
GO:0043525 P positive regulation of neuron apoptotic process
GO:0046872 F metal ion binding
GO:0051020 F GTPase binding
GO:0060996 P dendritic spine development
GO:0061003 P positive regulation of dendritic spine morphogenesis
GO:0071407 P cellular response to organic cyclic compound
GO:2000573 P positive regulation of DNA biosynthetic process
2528 O_BomoEE12276_complete:A_BomoEE_comp65835_c0_seq1
184bp
 PREDICTED:_meiosis-specific_with_OB_domain-containing_protein-like_isoform_X1_[Papilio_xuthus]
GO:0000712 P resolution of meiotic recombination intermediates
GO:0000724 P double-strand break repair via homologous recombination
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003697 F single-stranded DNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0007129 P homologous chromosome pairing at meiosis
GO:0007140 P male meiotic nuclear division
GO:0007141 P male meiosis I
GO:0007144 P female meiosis I
GO:0008310 F single-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0009566 P fertilization
GO:0016787 F hydrolase activity
GO:0051321 P meiotic cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2529 O_BomoEE12277_complete:A_BomoEE_comp65838_c0_seq1
625bp
 PREDICTED:_ATP-binding_cassette_sub-family_G_member_1-like_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0033344 P cholesterol efflux
GO:0034041 F ABC-type sterol transporter activity
GO:0042803 F protein homodimerization activity
GO:0046982 F protein heterodimerization activity
GO:0055085 P transmembrane transport
2530 O_BomoEE12278_complete:A_BomoEE_comp65838_c0_seq1
110bp
2531 O_BomoEE12279_complete:A_BomoEE_comp65838_c0_seq2
245bp
 ATP-binding_cassette_sub-family_G_member_1_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0033344 P cholesterol efflux
GO:0034041 F ABC-type sterol transporter activity
GO:0042803 F protein homodimerization activity
GO:0046982 F protein heterodimerization activity
GO:0055085 P transmembrane transport
2532 O_BomoEE1227_internal:A_BomoEE_comp27300_c0_seq1
124bp
 FMRFamide_receptor_[Bombyx_mori]
GO:0001653 F peptide receptor activity
GO:0002209 P behavioral defense response
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0004985 F G protein-coupled opioid receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007204 P positive regulation of cytosolic calcium ion concentration
GO:0007218 P neuropeptide signaling pathway
GO:0008188 F neuropeptide receptor activity
GO:0008344 P adult locomotory behavior
GO:0008345 P larval locomotory behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0038003 P G protein-coupled opioid receptor signaling pathway
2533 O_BomoEE12280_complete:A_BomoEE_comp65838_c0_seq3
319bp
 PREDICTED:_ATP-binding_cassette_sub-family_G_member_1-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005548 F phospholipid transporter activity
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008203 P cholesterol metabolic process
GO:0009897 C external side of plasma membrane
GO:0010033 P response to organic substance
GO:0010745 P negative regulation of macrophage derived foam cell differentiation
GO:0010872 P regulation of cholesterol esterification
GO:0010875 P positive regulation of cholesterol efflux
GO:0010888 P negative regulation of lipid storage
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0019534 F toxin transmembrane transporter activity
GO:0030301 P cholesterol transport
GO:0032367 P intracellular cholesterol transport
GO:0033344 P cholesterol efflux
GO:0033700 P phospholipid efflux
GO:0033993 P response to lipid
GO:0034041 F ABC-type sterol transporter activity
GO:0034374 P low-density lipoprotein particle remodeling
GO:0034375 P high-density lipoprotein particle remodeling
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0042632 P cholesterol homeostasis
GO:0042803 F protein homodimerization activity
GO:0042987 P amyloid precursor protein catabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043531 F ADP binding
GO:0043691 P reverse cholesterol transport
GO:0045542 P positive regulation of cholesterol biosynthetic process
GO:0046982 F protein heterodimerization activity
GO:0055037 C recycling endosome
GO:0055091 P phospholipid homeostasis
GO:0055099 P cellular response to high density lipoprotein particle stimulus
GO:1901998 P toxin transport
2534 O_BomoEE12281_complete:A_BomoEE_comp65838_c0_seq3
110bp
2535 O_BomoEE12282_complete:A_BomoEE_comp65843_c0_seq1
147bp
 mannose-P-dolichol_utilization_defect_1_protein_[Bombyx_mori]
GO:0006486 P protein glycosylation
GO:0006488 P dolichol-linked oligosaccharide biosynthetic process
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2536 O_BomoEE12283_complete:A_BomoEE_comp65843_c0_seq2
237bp
 mannose-P-dolichol_utilization_defect_1_protein_[Bombyx_mori]
GO:0006486 P protein glycosylation
GO:0006488 P dolichol-linked oligosaccharide biosynthetic process
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2537 O_BomoEE12284_complete:A_BomoEE_comp65845_c0_seq1
291bp
 putative_ATPase_family_AAA_domain-containing_protein_3_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042645 C mitochondrial nucleoid
2538 O_BomoEE12285_complete:A_BomoEE_comp65845_c0_seq2
283bp
 PREDICTED:_ATPase_family_AAA_domain-containing_protein_3-B_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042645 C mitochondrial nucleoid
2539 O_BomoEE12286_complete:A_BomoEE_comp65845_c0_seq3
632bp
 putative_ATPase_family_AAA_domain-containing_protein_3_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042645 C mitochondrial nucleoid
2540 O_BomoEE12287_complete:A_BomoEE_comp65847_c0_seq1
630bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_mitochondrial_Rho_GTPase-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000226 P microtubule cytoskeleton organization
GO:0000287 F magnesium ion binding
GO:0003924 F GTPase activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005829 C cytosol
GO:0007005 P mitochondrion organization
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0007268 P chemical synaptic transmission
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0019725 P cellular homeostasis
GO:0031122 P cytoplasmic microtubule organization
GO:0031307 C integral component of mitochondrial outer membrane
GO:0034643 P establishment of mitochondrion localization, microtubule-mediated
GO:0046872 F metal ion binding
GO:0047497 P mitochondrion transport along microtubule
GO:0048489 P synaptic vesicle transport
GO:0051646 P mitochondrion localization
GO:0097345 P mitochondrial outer membrane permeabilization
2541 O_BomoEE12288_complete:A_BomoEE_comp65847_c0_seq4
589bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_mitochondrial_Rho_GTPase-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000226 P microtubule cytoskeleton organization
GO:0000287 F magnesium ion binding
GO:0003924 F GTPase activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005829 C cytosol
GO:0007005 P mitochondrion organization
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0007268 P chemical synaptic transmission
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0019725 P cellular homeostasis
GO:0031122 P cytoplasmic microtubule organization
GO:0031307 C integral component of mitochondrial outer membrane
GO:0034643 P establishment of mitochondrion localization, microtubule-mediated
GO:0046872 F metal ion binding
GO:0047497 P mitochondrion transport along microtubule
GO:0048489 P synaptic vesicle transport
GO:0051646 P mitochondrion localization
GO:0097345 P mitochondrial outer membrane permeabilization
2542 O_BomoEE12289_5prime_partial:A_BomoEE_comp65849_c0_seq1
192bp
 PREDICTED:_glucose_dehydrogenase_[FAD,_quinone]-like_[Plutella_xylostella]
2543 O_BomoEE1228_5prime_partial:A_BomoEE_comp27330_c0_seq1
101bp
2544 O_BomoEE12290_complete:A_BomoEE_comp65853_c0_seq1
501bp
 PREDICTED:_protein_eva-1-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
2545 O_BomoEE12291_complete:A_BomoEE_comp65853_c0_seq2
459bp
 PREDICTED:_protein_eva-1-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
2546 O_BomoEE12292_3prime_partial:A_BomoEE_comp65854_c0_seq1
1679bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_UBR1-like_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0005737 C cytoplasm
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0008023 C transcription elongation factor complex
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030163 P protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
2547 O_BomoEE12293_complete:A_BomoEE_comp65854_c0_seq1
253bp
2548 O_BomoEE12294_complete:A_BomoEE_comp65854_c0_seq1
184bp
2549 O_BomoEE12295_complete:A_BomoEE_comp65854_c0_seq1
148bp
2550 O_BomoEE12296_complete:A_BomoEE_comp65854_c0_seq1
116bp
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