SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/95730
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2071 O_BomoEE11865_5prime_partial:A_BomoEE_comp65469_c0_seq1
614bp
 hypothetical_protein_KGM_22219_[Danaus_plexippus]
GO:0005575 C cellular_component
GO:0008150 P biological_process
2072 O_BomoEE11866_complete:A_BomoEE_comp65469_c0_seq1
135bp
2073 O_BomoEE11867_complete:A_BomoEE_comp65469_c0_seq1
134bp
2074 O_BomoEE11868_complete:A_BomoEE_comp65469_c0_seq1
117bp
2075 O_BomoEE11869_complete:A_BomoEE_comp65470_c0_seq1
1379bp
 PREDICTED:_mitogen-activated_protein_kinase_kinase_kinase_kinase_4_isoform_X1_[Papilio_xuthus]
GO:0000003 P reproduction
GO:0000166 F nucleotide binding
GO:0002119 P nematode larval development
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0010171 P body morphogenesis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0023014 P signal transduction
GO:0030334 P regulation of cell migration
GO:0032228 P regulation of synaptic transmission, GABAergic
GO:0033563 P dorsal/ventral axon guidance
GO:0048812 P neuron projection morphogenesis
2076 O_BomoEE1186_internal:A_BomoEE_comp26396_c0_seq1
100bp
2077 O_BomoEE11870_complete:A_BomoEE_comp65470_c0_seq1
136bp
2078 O_BomoEE11871_complete:A_BomoEE_comp65470_c0_seq1
108bp
2079 O_BomoEE11872_5prime_partial:A_BomoEE_comp65471_c0_seq1
405bp
 PREDICTED:_silk_gland_factor_1_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0019904 F protein domain specific binding
GO:0043565 F sequence-specific DNA binding
2080 O_BomoEE11873_complete:A_BomoEE_comp65471_c0_seq1
108bp
2081 O_BomoEE11874_5prime_partial:A_BomoEE_comp65472_c0_seq1
211bp
 PREDICTED:_uncharacterized_protein_LOC101738502_[Bombyx_mori]
2082 O_BomoEE11875_5prime_partial:A_BomoEE_comp65472_c0_seq2
103bp
 PREDICTED:_uncharacterized_protein_LOC101738502_[Bombyx_mori]
2083 O_BomoEE11876_complete:A_BomoEE_comp65477_c0_seq1
349bp
 PREDICTED:_facilitated_trehalose_transporter_Tret1-like_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005351 F carbohydrate:proton symporter activity
GO:0005355 F glucose transmembrane transporter activity
GO:0005773 C vacuole
GO:0005774 C vacuolar membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0035428 P hexose transmembrane transport
GO:0046323 P glucose import
GO:0055085 P transmembrane transport
GO:1904659 P glucose transmembrane transport
2084 O_BomoEE11877_3prime_partial:A_BomoEE_comp65477_c0_seq1
117bp
 PREDICTED:_facilitated_trehalose_transporter_Tret1-like_isoform_X1_[Bombyx_mori]
2085 O_BomoEE11878_complete:A_BomoEE_comp65477_c0_seq2
349bp
 PREDICTED:_facilitated_trehalose_transporter_Tret1-like_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005351 F carbohydrate:proton symporter activity
GO:0005355 F glucose transmembrane transporter activity
GO:0005773 C vacuole
GO:0005774 C vacuolar membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0035428 P hexose transmembrane transport
GO:0046323 P glucose import
GO:0055085 P transmembrane transport
GO:1904659 P glucose transmembrane transport
2086 O_BomoEE11879_complete:A_BomoEE_comp65477_c0_seq2
253bp
 PREDICTED:_facilitated_trehalose_transporter_Tret1-like_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
2087 O_BomoEE1187_internal:A_BomoEE_comp26396_c0_seq2
99bp
2088 O_BomoEE11880_3prime_partial:A_BomoEE_comp65477_c0_seq3
411bp
 PREDICTED:_facilitated_trehalose_transporter_Tret1-like_isoform_X1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
2089 O_BomoEE11881_complete:A_BomoEE_comp65477_c0_seq4
145bp
 PREDICTED:_facilitated_trehalose_transporter_Tret1-like_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
2090 O_BomoEE11882_complete:A_BomoEE_comp65477_c0_seq5
547bp
 PREDICTED:_facilitated_trehalose_transporter_Tret1-like_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
2091 O_BomoEE11883_5prime_partial:A_BomoEE_comp65478_c0_seq1
106bp
2092 O_BomoEE11884_complete:A_BomoEE_comp65479_c0_seq1
360bp
 PREDICTED:_zinc_transporter_1_[Papilio_polytes]
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006829 P zinc ion transport
GO:0008324 F cation transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
GO:0098655 P cation transmembrane transport
2093 O_BomoEE11885_complete:A_BomoEE_comp65479_c0_seq1
103bp
2094 O_BomoEE11886_complete:A_BomoEE_comp65487_c0_seq1
213bp
 autophagy_5-like_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000422 P autophagy of mitochondrion
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006501 P C-terminal protein lipidation
GO:0006810 P transport
GO:0006914 P autophagy
GO:0006995 P cellular response to nitrogen starvation
GO:0009267 P cellular response to starvation
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016236 P macroautophagy
GO:0019776 F Atg8 ligase activity
GO:0034045 C phagophore assembly site membrane
GO:0034274 C Atg12-Atg5-Atg16 complex
GO:0035071 P salivary gland cell autophagic cell death
GO:0035096 P larval midgut cell programmed cell death
GO:0044804 P autophagy of nucleus
GO:0048102 P autophagic cell death
GO:0061723 P glycophagy
2095 O_BomoEE11887_complete:A_BomoEE_comp65487_c0_seq2
265bp
 autophagy_5-like_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000422 P autophagy of mitochondrion
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006501 P C-terminal protein lipidation
GO:0006810 P transport
GO:0006914 P autophagy
GO:0006995 P cellular response to nitrogen starvation
GO:0009267 P cellular response to starvation
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016236 P macroautophagy
GO:0019776 F Atg8 ligase activity
GO:0034045 C phagophore assembly site membrane
GO:0034274 C Atg12-Atg5-Atg16 complex
GO:0035071 P salivary gland cell autophagic cell death
GO:0035096 P larval midgut cell programmed cell death
GO:0044804 P autophagy of nucleus
GO:0048102 P autophagic cell death
GO:0061723 P glycophagy
2096 O_BomoEE11888_complete:A_BomoEE_comp65493_c0_seq1
162bp
 nuclear_cap-binding_protein_subunit_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000339 F RNA cap binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005846 C nuclear cap binding complex
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0031047 P gene silencing by RNA
GO:0045292 P mRNA cis splicing, via spliceosome
2097 O_BomoEE11889_5prime_partial:A_BomoEE_comp65493_c0_seq1
107bp
 similar_to_CG30291,_partial_[Papilio_xuthus]
GO:0000079 P regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0001933 P negative regulation of protein phosphorylation
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007346 P regulation of mitotic cell cycle
GO:0007420 P brain development
GO:0008283 P cell population proliferation
GO:0010921 P regulation of phosphatase activity
GO:0012505 C endomembrane system
GO:0030262 P apoptotic nuclear changes
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0031398 P positive regulation of protein ubiquitination
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0032403 F protein-containing complex binding
GO:0043407 P negative regulation of MAP kinase activity
GO:0044387 P negative regulation of protein kinase activity by regulation of protein phosphorylation
GO:0044389 F ubiquitin-like protein ligase binding
GO:0044818 P mitotic G2/M transition checkpoint
GO:0045664 P regulation of neuron differentiation
GO:0071901 P negative regulation of protein serine/threonine kinase activity
GO:1900182 P positive regulation of protein localization to nucleus
GO:1901798 P positive regulation of signal transduction by p53 class mediator
GO:1903363 P negative regulation of cellular protein catabolic process
GO:2000060 P positive regulation of ubiquitin-dependent protein catabolic process
2098 O_BomoEE1188_internal:A_BomoEE_comp26396_c0_seq2
99bp
 PREDICTED:_DNA_topoisomerase_2-binding_protein_1_[Bombyx_mori]
GO:0000794 C condensed nuclear chromosome
GO:0000922 C spindle pole
GO:0001673 C male germ cell nucleus
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006259 P DNA metabolic process
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008022 F protein C-terminus binding
GO:0010212 P response to ionizing radiation
GO:0015629 C actin cytoskeleton
GO:0016605 C PML body
GO:0042802 F identical protein binding
GO:1901796 P regulation of signal transduction by p53 class mediator
2099 O_BomoEE11890_complete:A_BomoEE_comp65493_c0_seq1
105bp
2100 O_BomoEE11891_5prime_partial:A_BomoEE_comp65493_c0_seq2
107bp
 similar_to_CG30291,_partial_[Papilio_xuthus]
GO:0000079 P regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0001933 P negative regulation of protein phosphorylation
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007346 P regulation of mitotic cell cycle
GO:0007420 P brain development
GO:0008283 P cell population proliferation
GO:0010921 P regulation of phosphatase activity
GO:0012505 C endomembrane system
GO:0030262 P apoptotic nuclear changes
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0031398 P positive regulation of protein ubiquitination
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0032403 F protein-containing complex binding
GO:0043407 P negative regulation of MAP kinase activity
GO:0044387 P negative regulation of protein kinase activity by regulation of protein phosphorylation
GO:0044389 F ubiquitin-like protein ligase binding
GO:0044818 P mitotic G2/M transition checkpoint
GO:0045664 P regulation of neuron differentiation
GO:0071901 P negative regulation of protein serine/threonine kinase activity
GO:1900182 P positive regulation of protein localization to nucleus
GO:1901798 P positive regulation of signal transduction by p53 class mediator
GO:1903363 P negative regulation of cellular protein catabolic process
GO:2000060 P positive regulation of ubiquitin-dependent protein catabolic process
previous next from show/95730

- SilkBase 1999-2023 -