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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1621 O_BomoEE1145_complete:A_BomoEE_comp25474_c0_seq1
108bp
1622 O_BomoEE11460_3prime_partial:A_BomoEE_comp65101_c0_seq4
550bp
 PREDICTED:_AT-rich_interactive_domain-containing_protein_4B_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0044212 F transcription cis-regulatory region binding
1623 O_BomoEE11461_5prime_partial:A_BomoEE_comp65101_c0_seq4
147bp
1624 O_BomoEE11462_5prime_partial:A_BomoEE_comp65101_c0_seq4
141bp
1625 O_BomoEE11463_3prime_partial:A_BomoEE_comp65101_c0_seq5
550bp
 PREDICTED:_AT-rich_interactive_domain-containing_protein_4B_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0044212 F transcription cis-regulatory region binding
1626 O_BomoEE11464_5prime_partial:A_BomoEE_comp65101_c0_seq5
147bp
1627 O_BomoEE11465_5prime_partial:A_BomoEE_comp65101_c0_seq5
141bp
1628 O_BomoEE11466_complete:A_BomoEE_comp65101_c1_seq1
612bp
 hypothetical_protein_KGM_03830_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006369 P termination of RNA polymerase II transcription
GO:0006397 P mRNA processing
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0008380 P RNA splicing
GO:0031124 P mRNA 3'-end processing
GO:0044822 F RNA binding
1629 O_BomoEE11467_3prime_partial:A_BomoEE_comp65102_c0_seq2
212bp
 PREDICTED:_uncharacterized_protein_LOC106132264_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006810 P transport
GO:0007040 P lysosome organization
GO:0015031 P protein transport
GO:0015630 C microtubule cytoskeleton
GO:0030595 P leukocyte chemotaxis
GO:0032438 P melanosome organization
GO:0032510 P endosome to lysosome transport via multivesicular body sorting pathway
GO:0033364 P mast cell secretory granule organization
GO:0042267 P natural killer cell mediated cytotoxicity
GO:0042742 P defense response to bacterium
GO:0042832 P defense response to protozoan
GO:0043473 P pigmentation
GO:0051607 P defense response to virus
1630 O_BomoEE11468_complete:A_BomoEE_comp65102_c0_seq2
157bp
1631 O_BomoEE11469_complete:A_BomoEE_comp65102_c0_seq2
122bp
1632 O_BomoEE1146_complete:A_BomoEE_comp25474_c0_seq2
108bp
1633 O_BomoEE11470_internal:A_BomoEE_comp65102_c0_seq3
254bp
 PREDICTED:_uncharacterized_protein_LOC106132264_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006810 P transport
GO:0007040 P lysosome organization
GO:0015031 P protein transport
GO:0015630 C microtubule cytoskeleton
GO:0030595 P leukocyte chemotaxis
GO:0032438 P melanosome organization
GO:0032510 P endosome to lysosome transport via multivesicular body sorting pathway
GO:0033364 P mast cell secretory granule organization
GO:0042267 P natural killer cell mediated cytotoxicity
GO:0042742 P defense response to bacterium
GO:0042832 P defense response to protozoan
GO:0043473 P pigmentation
GO:0051607 P defense response to virus
1634 O_BomoEE11471_complete:A_BomoEE_comp65102_c0_seq3
157bp
1635 O_BomoEE11472_3prime_partial:A_BomoEE_comp65102_c0_seq3
149bp
1636 O_BomoEE11473_complete:A_BomoEE_comp65103_c0_seq1
134bp
 PREDICTED:_KRAB-A_domain-containing_protein_2-like,_partial_[Acyrthosiphon_pisum]
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0006355 P regulation of transcription, DNA-templated
GO:0015074 P DNA integration
1637 O_BomoEE11474_complete:A_BomoEE_comp65103_c0_seq2
108bp
 PREDICTED:_KRAB-A_domain-containing_protein_2-like_[Acyrthosiphon_pisum]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0015074 P DNA integration
1638 O_BomoEE11475_complete:A_BomoEE_comp65103_c0_seq2
108bp
1639 O_BomoEE11476_complete:A_BomoEE_comp65103_c0_seq3
130bp
 PREDICTED:_KRAB-A_domain-containing_protein_2-like,_partial_[Acyrthosiphon_pisum]
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0006355 P regulation of transcription, DNA-templated
GO:0015074 P DNA integration
1640 O_BomoEE11477_complete:A_BomoEE_comp65103_c0_seq3
108bp
1641 O_BomoEE11478_complete:A_BomoEE_comp65103_c0_seq4
134bp
 PREDICTED:_KRAB-A_domain-containing_protein_2-like,_partial_[Acyrthosiphon_pisum]
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0006355 P regulation of transcription, DNA-templated
GO:0015074 P DNA integration
1642 O_BomoEE11479_complete:A_BomoEE_comp65106_c0_seq1
140bp
 PREDICTED:_probable_peptide_chain_release_factor_C12orf65_homolog,_mitochondrial_[Plutella_xylostella]
GO:0003747 F translation release factor activity
GO:0004045 F aminoacyl-tRNA hydrolase activity
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0006412 P translation
GO:0006415 P translational termination
GO:0016149 F translation release factor activity, codon specific
GO:0016150 F translation release factor activity, codon nonspecific
GO:0043022 F ribosome binding
GO:0070126 P mitochondrial translational termination
GO:0072344 P rescue of stalled ribosome
1643 O_BomoEE1147_complete:A_BomoEE_comp25544_c0_seq1
148bp
 PREDICTED:_corticotropin-releasing_factor-like_diuretic_hormone_isoform_X3_[Bombyx_mori]
GO:0005179 F hormone activity
GO:0005576 C extracellular region
GO:0007589 P body fluid secretion
GO:0008613 F diuretic hormone activity
1644 O_BomoEE11480_5prime_partial:A_BomoEE_comp65107_c0_seq1
171bp
 PREDICTED:_F-box/LRR-repeat_protein_20_[Papilio_xuthus]
GO:0001662 P behavioral fear response
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
1645 O_BomoEE11481_3prime_partial:A_BomoEE_comp65107_c0_seq1
118bp
1646 O_BomoEE11482_complete:A_BomoEE_comp65114_c0_seq1
106bp
1647 O_BomoEE11483_complete:A_BomoEE_comp65115_c0_seq1
1743bp
 PREDICTED:_uncharacterized_protein_LOC101736992_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005643 C nuclear pore
GO:0006406 P mRNA export from nucleus
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0030154 P cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048477 P oogenesis
1648 O_BomoEE11484_complete:A_BomoEE_comp65115_c0_seq1
139bp
1649 O_BomoEE11485_complete:A_BomoEE_comp65115_c0_seq1
114bp
1650 O_BomoEE11486_complete:A_BomoEE_comp65115_c0_seq1
101bp
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