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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1591 O_BomoEE11432_complete:A_BomoEE_comp65078_c0_seq3
145bp
1592 O_BomoEE11433_complete:A_BomoEE_comp65078_c0_seq3
111bp
1593 O_BomoEE11434_complete:A_BomoEE_comp65078_c0_seq3
103bp
1594 O_BomoEE11435_complete:A_BomoEE_comp65079_c0_seq1
742bp
 PREDICTED:_engulfment_and_cell_motility_protein_1_[Papilio_xuthus]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006909 P phagocytosis
GO:0006911 P phagocytosis, engulfment
GO:0006915 P apoptotic process
GO:0006928 P movement of cell or subcellular component
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0016601 P Rac protein signal transduction
GO:0017124 F SH3 domain binding
GO:0030029 P actin filament-based process
GO:0030036 P actin cytoskeleton organization
GO:0032045 C guanyl-nucleotide exchange factor complex
GO:0038096 P Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0043547 P positive regulation of GTPase activity
GO:0048010 P vascular endothelial growth factor receptor signaling pathway
GO:0050690 P regulation of defense response to virus by virus
1595 O_BomoEE11436_complete:A_BomoEE_comp65085_c0_seq1
104bp
 PREDICTED:_zinc_finger_protein_699-like_isoform_X1_[Bombyx_mori]
1596 O_BomoEE11437_complete:A_BomoEE_comp65085_c0_seq3
481bp
 PREDICTED:_zinc_finger_protein_699-like_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
1597 O_BomoEE11438_complete:A_BomoEE_comp65085_c0_seq3
128bp
1598 O_BomoEE11439_3prime_partial:A_BomoEE_comp65085_c0_seq4
509bp
 PREDICTED:_zinc_finger_protein_699-like_isoform_X1_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
1599 O_BomoEE1143_internal:A_BomoEE_comp25389_c0_seq1
183bp
 ORF1_[Bombyx_mori]
1600 O_BomoEE11440_complete:A_BomoEE_comp65085_c0_seq4
128bp
1601 O_BomoEE11441_5prime_partial:A_BomoEE_comp65085_c0_seq5
130bp
 PREDICTED:_zinc_finger_protein_699-like_isoform_X1_[Bombyx_mori]
1602 O_BomoEE11442_5prime_partial:A_BomoEE_comp65085_c0_seq5
101bp
 hypothetical_protein_KGM_21483_[Danaus_plexippus]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
1603 O_BomoEE11443_internal:A_BomoEE_comp65093_c0_seq1
986bp
 PREDICTED:_ankyrin_repeat_domain-containing_protein_17-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0044822 F RNA binding
GO:0045087 P innate immune response
1604 O_BomoEE11444_5prime_partial:A_BomoEE_comp65093_c0_seq1
424bp
1605 O_BomoEE11445_complete:A_BomoEE_comp65093_c0_seq1
150bp
1606 O_BomoEE11446_complete:A_BomoEE_comp65093_c0_seq1
146bp
1607 O_BomoEE11447_3prime_partial:A_BomoEE_comp65093_c0_seq1
113bp
1608 O_BomoEE11448_5prime_partial:A_BomoEE_comp65093_c0_seq1
111bp
1609 O_BomoEE11449_complete:A_BomoEE_comp65093_c0_seq1
101bp
1610 O_BomoEE1144_5prime_partial:A_BomoEE_comp25447_c0_seq1
112bp
1611 O_BomoEE11450_complete:A_BomoEE_comp65095_c0_seq1
498bp
 PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX28_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0019843 F rRNA binding
GO:0035770 C ribonucleoprotein granule
GO:0042254 P ribosome biogenesis
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
GO:1902775 P mitochondrial large ribosomal subunit assembly
1612 O_BomoEE11451_3prime_partial:A_BomoEE_comp65101_c0_seq1
550bp
 PREDICTED:_AT-rich_interactive_domain-containing_protein_4B_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0044212 F transcription cis-regulatory region binding
1613 O_BomoEE11452_5prime_partial:A_BomoEE_comp65101_c0_seq1
147bp
1614 O_BomoEE11453_5prime_partial:A_BomoEE_comp65101_c0_seq1
141bp
1615 O_BomoEE11454_3prime_partial:A_BomoEE_comp65101_c0_seq2
550bp
 PREDICTED:_AT-rich_interactive_domain-containing_protein_4B_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0044212 F transcription cis-regulatory region binding
1616 O_BomoEE11455_5prime_partial:A_BomoEE_comp65101_c0_seq2
147bp
1617 O_BomoEE11456_5prime_partial:A_BomoEE_comp65101_c0_seq2
141bp
1618 O_BomoEE11457_3prime_partial:A_BomoEE_comp65101_c0_seq3
550bp
 PREDICTED:_AT-rich_interactive_domain-containing_protein_4B_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0044212 F transcription cis-regulatory region binding
1619 O_BomoEE11458_5prime_partial:A_BomoEE_comp65101_c0_seq3
147bp
1620 O_BomoEE11459_5prime_partial:A_BomoEE_comp65101_c0_seq3
141bp
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