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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
14971 O_BomoEE23475_3prime_partial:A_BomoEE_comp70652_c0_seq3
131bp
14972 O_BomoEE23476_5prime_partial:A_BomoEE_comp70652_c0_seq3
107bp
14973 O_BomoEE23477_5prime_partial:A_BomoEE_comp70652_c0_seq4
111bp
 PREDICTED:_optomotor-blind_protein-like_[Papilio_polytes]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001745 P compound eye morphogenesis
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007472 P wing disc morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0035265 P organ growth
GO:0048066 P developmental pigmentation
GO:0048100 P wing disc anterior/posterior pattern formation
14974 O_BomoEE23478_complete:A_BomoEE_comp70655_c0_seq1
1811bp
 chromodomain-helicase-DNA-binding_protein_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008026 F helicase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
14975 O_BomoEE23479_complete:A_BomoEE_comp70655_c0_seq1
113bp
14976 O_BomoEE2347_3prime_partial:A_BomoEE_comp33951_c0_seq1
169bp
 PREDICTED:_ubiquitin-conjugating_enzyme_E2_S_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0007049 P cell cycle
GO:0010458 P exit from mitosis
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0051301 P cell division
14977 O_BomoEE23480_complete:A_BomoEE_comp70655_c0_seq1
102bp
14978 O_BomoEE23481_complete:A_BomoEE_comp70655_c0_seq2
1788bp
 chromodomain-helicase-DNA-binding_protein_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008026 F helicase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
14979 O_BomoEE23482_complete:A_BomoEE_comp70655_c0_seq2
138bp
14980 O_BomoEE23483_complete:A_BomoEE_comp70655_c0_seq2
113bp
14981 O_BomoEE23484_complete:A_BomoEE_comp70655_c0_seq2
102bp
14982 O_BomoEE23485_complete:A_BomoEE_comp70659_c0_seq1
134bp
14983 O_BomoEE23486_complete:A_BomoEE_comp70659_c0_seq2
145bp
14984 O_BomoEE23487_complete:A_BomoEE_comp70661_c0_seq1
2211bp
 megator_[Danaus_plexippus]
GO:0000022 P mitotic spindle elongation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0003677 F DNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005652 C nuclear lamina
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005719 C euchromatin
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006325 P chromatin organization
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0007346 P regulation of mitotic cell cycle
GO:0009408 P response to heat
GO:0010965 P regulation of mitotic sister chromatid separation
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0016568 P chromatin organization
GO:0030496 C midbody
GO:0031490 F chromatin DNA binding
GO:0031965 C nuclear membrane
GO:0032888 P regulation of mitotic spindle elongation
GO:0034399 C nuclear periphery
GO:0034401 P obsolete chromatin organization involved in regulation of transcription
GO:0034976 P response to endoplasmic reticulum stress
GO:0042405 C nuclear inclusion body
GO:0043021 F ribonucleoprotein complex binding
GO:0045840 P positive regulation of mitotic nuclear division
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051028 P mRNA transport
GO:0051225 P spindle assembly
GO:0051233 C spindle midzone
GO:0051301 P cell division
GO:0051781 P positive regulation of cell division
GO:0051983 P regulation of chromosome segregation
GO:0060236 P regulation of mitotic spindle organization
GO:0070090 C metaphase plate
GO:0072686 C mitotic spindle
GO:0090235 P regulation of metaphase plate congression
GO:0090267 P positive regulation of mitotic cell cycle spindle assembly checkpoint
GO:0090316 P positive regulation of intracellular protein transport
GO:1901673 P regulation of mitotic spindle assembly
GO:1990047 C spindle matrix
14985 O_BomoEE23488_complete:A_BomoEE_comp70661_c0_seq1
163bp
14986 O_BomoEE23489_complete:A_BomoEE_comp70661_c0_seq1
122bp
14987 O_BomoEE2348_3prime_partial:A_BomoEE_comp33951_c0_seq1
122bp
14988 O_BomoEE23490_complete:A_BomoEE_comp70661_c0_seq2
2216bp
 megator_[Danaus_plexippus]
GO:0000022 P mitotic spindle elongation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0003677 F DNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005652 C nuclear lamina
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005719 C euchromatin
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006325 P chromatin organization
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0007346 P regulation of mitotic cell cycle
GO:0009408 P response to heat
GO:0010965 P regulation of mitotic sister chromatid separation
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0016568 P chromatin organization
GO:0030496 C midbody
GO:0031490 F chromatin DNA binding
GO:0031965 C nuclear membrane
GO:0032888 P regulation of mitotic spindle elongation
GO:0034399 C nuclear periphery
GO:0034401 P obsolete chromatin organization involved in regulation of transcription
GO:0034976 P response to endoplasmic reticulum stress
GO:0042405 C nuclear inclusion body
GO:0043021 F ribonucleoprotein complex binding
GO:0045840 P positive regulation of mitotic nuclear division
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051028 P mRNA transport
GO:0051225 P spindle assembly
GO:0051233 C spindle midzone
GO:0051301 P cell division
GO:0051781 P positive regulation of cell division
GO:0051983 P regulation of chromosome segregation
GO:0060236 P regulation of mitotic spindle organization
GO:0070090 C metaphase plate
GO:0072686 C mitotic spindle
GO:0090235 P regulation of metaphase plate congression
GO:0090267 P positive regulation of mitotic cell cycle spindle assembly checkpoint
GO:0090316 P positive regulation of intracellular protein transport
GO:1901673 P regulation of mitotic spindle assembly
GO:1990047 C spindle matrix
14989 O_BomoEE23491_complete:A_BomoEE_comp70661_c0_seq2
168bp
14990 O_BomoEE23492_complete:A_BomoEE_comp70661_c0_seq2
122bp
14991 O_BomoEE23493_complete:A_BomoEE_comp70663_c0_seq1
881bp
 PREDICTED:_uncharacterized_protein_LOC101743969_isoform_X4_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0007281 P germ cell development
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0035511 P oxidative DNA demethylation
GO:0035514 F DNA demethylase activity
GO:0035516 F oxidative DNA demethylase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:1901537 P positive regulation of DNA demethylation
14992 O_BomoEE23494_complete:A_BomoEE_comp70663_c0_seq1
131bp
14993 O_BomoEE23495_5prime_partial:A_BomoEE_comp70663_c0_seq2
1612bp
 PREDICTED:_uncharacterized_protein_LOC101743969_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0007281 P germ cell development
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0035511 P oxidative DNA demethylation
GO:0035514 F DNA demethylase activity
GO:0035516 F oxidative DNA demethylase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:1901537 P positive regulation of DNA demethylation
14994 O_BomoEE23496_complete:A_BomoEE_comp70663_c0_seq2
131bp
14995 O_BomoEE23497_5prime_partial:A_BomoEE_comp70663_c0_seq3
721bp
 PREDICTED:_uncharacterized_protein_LOC101743969_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0007281 P germ cell development
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0035511 P oxidative DNA demethylation
GO:0035514 F DNA demethylase activity
GO:0035516 F oxidative DNA demethylase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:1901537 P positive regulation of DNA demethylation
14996 O_BomoEE23498_complete:A_BomoEE_comp70664_c0_seq1
329bp
 PREDICTED:_uncharacterized_protein_LOC101741928_[Bombyx_mori]
14997 O_BomoEE23499_complete:A_BomoEE_comp70664_c0_seq2
206bp
 PREDICTED:_uncharacterized_protein_LOC101741928_[Bombyx_mori]
14998 O_BomoEE2349_complete:A_BomoEE_comp33951_c0_seq1
112bp
14999 O_BomoEE234_internal:A_BomoEE_comp3495_c0_seq1
175bp
 PREDICTED:_GABA-gated_chlorine_channel_alpha_subunit_isoform_X1_[Bombyx_mori]
GO:0001505 P regulation of neurotransmitter levels
GO:0004890 F GABA-A receptor activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0005254 F chloride channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006821 P chloride transport
GO:0006836 P neurotransmitter transport
GO:0007214 P gamma-aminobutyric acid signaling pathway
GO:0007268 P chemical synaptic transmission
GO:0008503 F benzodiazepine receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030285 C integral component of synaptic vesicle membrane
GO:0034220 P ion transmembrane transport
GO:0034707 C chloride channel complex
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0099565 P chemical synaptic transmission, postsynaptic
GO:1902476 P chloride transmembrane transport
15000 O_BomoEE23500_complete:A_BomoEE_comp70664_c0_seq3
297bp
 PREDICTED:_uncharacterized_protein_LOC101741928_[Bombyx_mori]
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