Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
14941	O_BomoEE23448_3prime_partial:A_BomoEE_comp70645_c1_seq1 230bp	Bomo_Chr5	nicotinic_acetylcholine_receptor_subunit_alpha_6_isoform_4_precursor_[Bombyx_mori]	GO:0005230 F extracellular ligand-gated ion channel activity GO:0006810 P transport GO:0006811 P ion transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0034220 P ion transmembrane transport
14942	O_BomoEE23449_complete:A_BomoEE_comp70645_c1_seq1 128bp	Bomo_Chr5	Neurotransmitter-gated_ion-channel_ligand_binding_domain_protein_[Oesophagostomum_dentatum]
14943	O_BomoEE2344_5prime_partial:A_BomoEE_comp33945_c0_seq1 384bp	Bomo_Chr10	PREDICTED:_rab5_GDP/GTP_exchange_factor_[Bombyx_mori]	GO:0001933 P negative regulation of protein phosphorylation GO:0002686 P negative regulation of leukocyte migration GO:0003677 F DNA binding GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005768 C endosome GO:0005769 C early endosome GO:0006612 P protein targeting to membrane GO:0006810 P transport GO:0006897 P endocytosis GO:0008270 F zinc ion binding GO:0015031 P protein transport GO:0016567 P protein ubiquitination GO:0017112 F guanyl-nucleotide exchange factor activity GO:0017137 F small GTPase binding GO:0031982 C vesicle GO:0033004 P negative regulation of mast cell activation GO:0043305 P negative regulation of mast cell degranulation GO:0043547 P positive regulation of GTPase activity GO:0046580 P negative regulation of Ras protein signal transduction GO:0046872 F metal ion binding GO:0048261 P negative regulation of receptor-mediated endocytosis GO:0050728 P negative regulation of inflammatory response GO:0055037 C recycling endosome GO:0060368 P regulation of Fc receptor mediated stimulatory signaling pathway GO:0061630 F ubiquitin protein ligase activity GO:1900165 P negative regulation of interleukin-6 production GO:1900235 P negative regulation of Kit signaling pathway
14944	O_BomoEE23450_5prime_partial:A_BomoEE_comp70645_c1_seq1 113bp	Bomo_Chr5
14945	O_BomoEE23451_3prime_partial:A_BomoEE_comp70645_c1_seq2 201bp	Bomo_Chr5	nicotinic_acetylcholine_receptor_subunit_alpha_6_mRNA_transcript_variant_2_[Bombyx_mori]	GO:0005230 F extracellular ligand-gated ion channel activity GO:0006810 P transport GO:0006811 P ion transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0034220 P ion transmembrane transport
14946	O_BomoEE23452_5prime_partial:A_BomoEE_comp70645_c1_seq2 113bp	Bomo_Chr5
14947	O_BomoEE23453_3prime_partial:A_BomoEE_comp70645_c1_seq3 236bp	Bomo_Chr5	nicotinic_acetylcholine_receptor_subunit_alpha_6_isoform_4_precursor_[Bombyx_mori]	GO:0005230 F extracellular ligand-gated ion channel activity GO:0006810 P transport GO:0006811 P ion transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0034220 P ion transmembrane transport
14948	O_BomoEE23454_complete:A_BomoEE_comp70645_c1_seq3 128bp	Bomo_Chr5	Neurotransmitter-gated_ion-channel_ligand_binding_domain_protein_[Oesophagostomum_dentatum]
14949	O_BomoEE23455_5prime_partial:A_BomoEE_comp70645_c1_seq3 119bp	Bomo_Chr5
14950	O_BomoEE23456_3prime_partial:A_BomoEE_comp70645_c1_seq4 126bp	Bomo_Chr5	nicotinic_acetylcholine_receptor_alpha_6_[Plutella_xylostella]	GO:0004889 F acetylcholine-gated cation-selective channel activity GO:0005216 F ion channel activity GO:0005230 F extracellular ligand-gated ion channel activity GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0005892 C acetylcholine-gated channel complex GO:0006810 P transport GO:0006811 P ion transport GO:0006816 P calcium ion transport GO:0007165 P signal transduction GO:0007271 P synaptic transmission, cholinergic GO:0008144 F obsolete drug binding GO:0008179 F adenylate cyclase binding GO:0014069 C postsynaptic density GO:0015464 F acetylcholine receptor activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0019228 P neuronal action potential GO:0019901 F protein kinase binding GO:0030054 C cell junction GO:0030424 C axon GO:0030425 C dendrite GO:0030426 C growth cone GO:0032279 C asymmetric synapse GO:0034220 P ion transmembrane transport GO:0042166 F acetylcholine binding GO:0042391 P regulation of membrane potential GO:0042416 P dopamine biosynthetic process GO:0042734 C presynaptic membrane GO:0043025 C neuronal cell body GO:0043197 C dendritic spine GO:0043198 C dendritic shaft GO:0045121 C membrane raft GO:0045202 C synapse GO:0045211 C postsynaptic membrane GO:0051117 F ATPase binding GO:0097110 F scaffold protein binding GO:0098655 P cation transmembrane transport GO:0099565 P chemical synaptic transmission, postsynaptic
14951	O_BomoEE23457_complete:A_BomoEE_comp70645_c1_seq4 117bp	Bomo_Chr5
14952	O_BomoEE23458_3prime_partial:A_BomoEE_comp70645_c1_seq5 207bp	Bomo_Chr5	nicotinic_acetylcholine_receptor_alpha_6_[Plutella_xylostella]	GO:0005230 F extracellular ligand-gated ion channel activity GO:0006810 P transport GO:0006811 P ion transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0034220 P ion transmembrane transport
14953	O_BomoEE23459_5prime_partial:A_BomoEE_comp70645_c1_seq5 119bp	Bomo_Chr5
14954	O_BomoEE2345_complete:A_BomoEE_comp33945_c0_seq1 122bp	Bomo_Chr10
14955	O_BomoEE23460_complete:A_BomoEE_comp70645_c1_seq6 302bp	Bomo_Chr5	nicotinic_acetylcholine_receptor_subunit_alpha_6_isoform_1_precursor_[Bombyx_mori]	GO:0005230 F extracellular ligand-gated ion channel activity GO:0006810 P transport GO:0006811 P ion transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0034220 P ion transmembrane transport
14956	O_BomoEE23461_complete:A_BomoEE_comp70645_c1_seq6 192bp	Bomo_Chr5	hypothetical_protein_EAI_14037_[Harpegnathos_saltator]
14957	O_BomoEE23462_complete:A_BomoEE_comp70645_c1_seq6 128bp	Bomo_Chr5	Neurotransmitter-gated_ion-channel_ligand_binding_domain_protein_[Oesophagostomum_dentatum]
14958	O_BomoEE23463_complete:A_BomoEE_comp70645_c1_seq7 273bp	Bomo_Chr5	nicotinic_acetylcholine_receptor_subunit_alpha_6_mRNA_transcript_variant_2_[Bombyx_mori]	GO:0004889 F acetylcholine-gated cation-selective channel activity GO:0005216 F ion channel activity GO:0005230 F extracellular ligand-gated ion channel activity GO:0005886 C plasma membrane GO:0005892 C acetylcholine-gated channel complex GO:0006810 P transport GO:0006811 P ion transport GO:0007165 P signal transduction GO:0007271 P synaptic transmission, cholinergic GO:0015464 F acetylcholine receptor activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0030054 C cell junction GO:0034220 P ion transmembrane transport GO:0042166 F acetylcholine binding GO:0042995 C cell projection GO:0045202 C synapse GO:0045211 C postsynaptic membrane GO:0098655 P cation transmembrane transport GO:0099565 P chemical synaptic transmission, postsynaptic
14959	O_BomoEE23464_complete:A_BomoEE_comp70645_c1_seq7 192bp	Bomo_Chr5	hypothetical_protein_EAI_14037_[Harpegnathos_saltator]
14960	O_BomoEE23465_complete:A_BomoEE_comp70647_c1_seq3 105bp	Bomo_Chr9	insulin-like_precursor_polypeptide_2_[Spodoptera_littoralis]	GO:0005179 F hormone activity GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0008083 F growth factor activity
14961	O_BomoEE23466_complete:A_BomoEE_comp70648_c0_seq2 133bp	Bomo_Chr23	hypothetical_protein_KGM_13923_[Danaus_plexippus]	GO:0008152 P metabolic process GO:0009117 P nucleotide metabolic process GO:0016311 P dephosphorylation GO:0016787 F hydrolase activity GO:0042060 P wound healing GO:0046872 F metal ion binding GO:1990738 F pseudouridine 5'-phosphatase activity
14962	O_BomoEE23467_3prime_partial:A_BomoEE_comp70648_c0_seq5 103bp	Bomo_Chr23	hypothetical_protein_KGM_13923_[Danaus_plexippus]	GO:0003674 F molecular_function GO:0008150 P biological_process GO:0008152 P metabolic process GO:0009117 P nucleotide metabolic process GO:0016311 P dephosphorylation GO:0016787 F hydrolase activity GO:0046872 F metal ion binding GO:0070062 C extracellular exosome GO:1990738 F pseudouridine 5'-phosphatase activity
14963	O_BomoEE23468_internal:A_BomoEE_comp70652_c0_seq1 473bp	Bomo_Chr16	PREDICTED:_optomotor-blind_protein-like_isoform_X4_[Bombyx_mori]	GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0001745 P compound eye morphogenesis GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0007472 P wing disc morphogenesis GO:0007476 P imaginal disc-derived wing morphogenesis GO:0035265 P organ growth GO:0048066 P developmental pigmentation GO:0048100 P wing disc anterior/posterior pattern formation
14964	O_BomoEE23469_3prime_partial:A_BomoEE_comp70652_c0_seq1 131bp	Bomo_Chr16
14965	O_BomoEE2346_complete:A_BomoEE_comp33949_c0_seq1 111bp	Bomo_Chr18	PREDICTED:_uncharacterized_protein_LOC106130313_[Amyelois_transitella]	GO:0005654 C nucleoplasm GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0005747 C mitochondrial respiratory chain complex I GO:0008150 P biological_process GO:0016020 C membrane GO:0044822 F RNA binding GO:0055114 P obsolete oxidation-reduction process GO:0070469 C respirasome
14966	O_BomoEE23470_5prime_partial:A_BomoEE_comp70652_c0_seq1 107bp	Bomo_Chr16
14967	O_BomoEE23471_internal:A_BomoEE_comp70652_c0_seq2 441bp	Bomo_Chr16	PREDICTED:_optomotor-blind_protein-like_isoform_X6_[Bombyx_mori]	GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0001745 P compound eye morphogenesis GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0007472 P wing disc morphogenesis GO:0007476 P imaginal disc-derived wing morphogenesis GO:0035265 P organ growth GO:0048066 P developmental pigmentation GO:0048100 P wing disc anterior/posterior pattern formation
14968	O_BomoEE23472_3prime_partial:A_BomoEE_comp70652_c0_seq2 131bp	Bomo_Chr16
14969	O_BomoEE23473_5prime_partial:A_BomoEE_comp70652_c0_seq2 107bp	Bomo_Chr16
14970	O_BomoEE23474_internal:A_BomoEE_comp70652_c0_seq3 469bp	Bomo_Chr16	PREDICTED:_optomotor-blind_protein-like_isoform_X4_[Bombyx_mori]	GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0001745 P compound eye morphogenesis GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0007472 P wing disc morphogenesis GO:0007476 P imaginal disc-derived wing morphogenesis GO:0035265 P organ growth GO:0048066 P developmental pigmentation GO:0048100 P wing disc anterior/posterior pattern formation