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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
14521 O_BomoEE2306_5prime_partial:A_BomoEE_comp33862_c0_seq1
117bp
14522 O_BomoEE23070_complete:A_BomoEE_comp70579_c1_seq9
177bp
14523 O_BomoEE23071_complete:A_BomoEE_comp70579_c1_seq9
121bp
14524 O_BomoEE23072_5prime_partial:A_BomoEE_comp70579_c1_seq10
940bp
 PREDICTED:_uncharacterized_protein_LOC101737920_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007507 P heart development
14525 O_BomoEE23073_complete:A_BomoEE_comp70579_c1_seq10
177bp
14526 O_BomoEE23074_complete:A_BomoEE_comp70579_c1_seq10
121bp
14527 O_BomoEE23075_complete:A_BomoEE_comp70579_c1_seq11
831bp
 PREDICTED:_uncharacterized_protein_LOC101737920_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007507 P heart development
14528 O_BomoEE23076_complete:A_BomoEE_comp70579_c1_seq11
177bp
14529 O_BomoEE23077_complete:A_BomoEE_comp70579_c1_seq11
121bp
14530 O_BomoEE23078_complete:A_BomoEE_comp70579_c4_seq1
305bp
 PREDICTED:_nuclear_receptor_subfamily_2_group_E_member_1_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
14531 O_BomoEE23079_complete:A_BomoEE_comp70579_c4_seq2
385bp
 PREDICTED:_nuclear_receptor_subfamily_2_group_E_member_1_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
14532 O_BomoEE2307_3prime_partial:A_BomoEE_comp33864_c0_seq1
1156bp
 PREDICTED:_probable_phospholipid-transporting_ATPase_IM_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007030 P Golgi organization
GO:0008152 P metabolic process
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0034220 P ion transmembrane transport
GO:0045332 P phospholipid translocation
GO:0046872 F metal ion binding
14533 O_BomoEE23080_complete:A_BomoEE_comp70579_c4_seq3
305bp
 PREDICTED:_nuclear_receptor_subfamily_2_group_E_member_1_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
14534 O_BomoEE23081_complete:A_BomoEE_comp70579_c4_seq3
103bp
14535 O_BomoEE23082_3prime_partial:A_BomoEE_comp70579_c5_seq1
109bp
 PREDICTED:_uncharacterized_protein_LOC101737920_[Bombyx_mori]
14536 O_BomoEE23083_complete:A_BomoEE_comp70581_c0_seq1
1094bp
 PREDICTED:_lateral_signaling_target_protein_2_homolog_[Amyelois_transitella]
GO:0046872 F metal ion binding
14537 O_BomoEE23084_complete:A_BomoEE_comp70581_c0_seq1
117bp
14538 O_BomoEE23085_complete:A_BomoEE_comp70581_c0_seq1
107bp
14539 O_BomoEE23086_complete:A_BomoEE_comp70581_c0_seq1
102bp
14540 O_BomoEE23087_complete:A_BomoEE_comp70583_c0_seq1
848bp
 PREDICTED:_serine/arginine_repetitive_matrix_protein_1_[Bombyx_mori]
14541 O_BomoEE23088_complete:A_BomoEE_comp70583_c0_seq1
127bp
14542 O_BomoEE23089_complete:A_BomoEE_comp70583_c0_seq2
681bp
 PREDICTED:_serine/arginine_repetitive_matrix_protein_1_[Bombyx_mori]
14543 O_BomoEE2308_5prime_partial:A_BomoEE_comp33864_c0_seq1
225bp
14544 O_BomoEE23090_complete:A_BomoEE_comp70583_c0_seq2
127bp
14545 O_BomoEE23091_complete:A_BomoEE_comp70584_c0_seq1
354bp
 PREDICTED:_testis-expressed_sequence_9_protein-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
14546 O_BomoEE23092_complete:A_BomoEE_comp70584_c0_seq1
159bp
14547 O_BomoEE23093_5prime_partial:A_BomoEE_comp70585_c0_seq1
1779bp
 PREDICTED:_multiple_epidermal_growth_factor-like_domains_protein_8_[Bombyx_mori]
GO:0003143 P embryonic heart tube morphogenesis
GO:0003674 F molecular_function
GO:0005509 F calcium ion binding
GO:0005634 C nucleus
GO:0007368 P determination of left/right symmetry
GO:0010468 P regulation of gene expression
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030326 P embryonic limb morphogenesis
GO:0030509 P BMP signaling pathway
GO:0035108 P limb morphogenesis
GO:0042074 P cell migration involved in gastrulation
GO:0048704 P embryonic skeletal system morphogenesis
GO:0048842 P positive regulation of axon extension involved in axon guidance
GO:0055113 P epiboly involved in gastrulation with mouth forming second
GO:0060971 P embryonic heart tube left/right pattern formation
GO:0060972 P left/right pattern formation
GO:0060976 P coronary vasculature development
GO:0061371 P determination of heart left/right asymmetry
GO:0070062 C extracellular exosome
GO:0071907 P determination of digestive tract left/right asymmetry
GO:0097094 P craniofacial suture morphogenesis
GO:0097155 P fasciculation of sensory neuron axon
14548 O_BomoEE23094_3prime_partial:A_BomoEE_comp70585_c0_seq1
221bp
14549 O_BomoEE23095_complete:A_BomoEE_comp70585_c0_seq1
117bp
14550 O_BomoEE23096_5prime_partial:A_BomoEE_comp70585_c0_seq1
104bp
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