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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
14401 O_BomoEE22962_5prime_partial:A_BomoEE_comp70559_c0_seq9
183bp
 PREDICTED:_structural_maintenance_of_chromosomes_protein_2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000796 C condensin complex
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0030261 P chromosome condensation
GO:0051276 P chromosome organization
GO:0051301 P cell division
14402 O_BomoEE22963_complete:A_BomoEE_comp70559_c0_seq9
175bp
 Structural_maintenance_of_chromosomes_protein_2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000796 C condensin complex
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0030261 P chromosome condensation
GO:0051276 P chromosome organization
GO:0051301 P cell division
14403 O_BomoEE22964_complete:A_BomoEE_comp70559_c0_seq9
100bp
 hypothetical_protein_EURHEDRAFT_299314_[Aspergillus_ruber_CBS_135680]
14404 O_BomoEE22965_complete:A_BomoEE_comp70560_c0_seq3
436bp
 PREDICTED:_GTP_exchange_factor_for_ARFs_1_isoform_X2_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030155 P regulation of cell adhesion
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0032012 P regulation of ARF protein signal transduction
GO:0043547 P positive regulation of GTPase activity
14405 O_BomoEE22966_complete:A_BomoEE_comp70560_c0_seq3
107bp
14406 O_BomoEE22967_complete:A_BomoEE_comp70560_c0_seq5
436bp
 PREDICTED:_GTP_exchange_factor_for_ARFs_1_isoform_X2_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030155 P regulation of cell adhesion
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0032012 P regulation of ARF protein signal transduction
GO:0043547 P positive regulation of GTPase activity
14407 O_BomoEE22968_complete:A_BomoEE_comp70560_c0_seq5
107bp
14408 O_BomoEE22969_complete:A_BomoEE_comp70560_c0_seq6
436bp
 PREDICTED:_GTP_exchange_factor_for_ARFs_1_isoform_X2_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030155 P regulation of cell adhesion
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0032012 P regulation of ARF protein signal transduction
GO:0043547 P positive regulation of GTPase activity
14409 O_BomoEE2296_complete:A_BomoEE_comp33847_c0_seq2
145bp
 PREDICTED:_uncharacterized_protein_LOC101739091_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0032147 P activation of protein kinase activity
GO:0051301 P cell division
14410 O_BomoEE22970_complete:A_BomoEE_comp70560_c0_seq6
107bp
14411 O_BomoEE22971_complete:A_BomoEE_comp70560_c0_seq7
436bp
 PREDICTED:_GTP_exchange_factor_for_ARFs_1_isoform_X2_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030155 P regulation of cell adhesion
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0032012 P regulation of ARF protein signal transduction
GO:0043547 P positive regulation of GTPase activity
14412 O_BomoEE22972_complete:A_BomoEE_comp70560_c0_seq7
107bp
14413 O_BomoEE22973_complete:A_BomoEE_comp70560_c0_seq9
398bp
 PREDICTED:_cytohesin-1_isoform_X3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030155 P regulation of cell adhesion
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0032012 P regulation of ARF protein signal transduction
GO:0043547 P positive regulation of GTPase activity
14414 O_BomoEE22974_complete:A_BomoEE_comp70560_c0_seq10
436bp
 PREDICTED:_GTP_exchange_factor_for_ARFs_1_isoform_X2_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030155 P regulation of cell adhesion
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0032012 P regulation of ARF protein signal transduction
GO:0043547 P positive regulation of GTPase activity
14415 O_BomoEE22975_complete:A_BomoEE_comp70560_c0_seq10
107bp
14416 O_BomoEE22976_complete:A_BomoEE_comp70560_c0_seq14
416bp
 PREDICTED:_GTP_exchange_factor_for_ARFs_1_isoform_X2_[Papilio_xuthus]
GO:0000139 C Golgi membrane
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030155 P regulation of cell adhesion
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0032012 P regulation of ARF protein signal transduction
GO:0043547 P positive regulation of GTPase activity
14417 O_BomoEE22977_complete:A_BomoEE_comp70560_c0_seq15
398bp
 PREDICTED:_cytohesin-1_isoform_X3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030155 P regulation of cell adhesion
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0032012 P regulation of ARF protein signal transduction
GO:0043547 P positive regulation of GTPase activity
14418 O_BomoEE22978_complete:A_BomoEE_comp70560_c0_seq18
436bp
 PREDICTED:_GTP_exchange_factor_for_ARFs_1_isoform_X2_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030155 P regulation of cell adhesion
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0032012 P regulation of ARF protein signal transduction
GO:0043547 P positive regulation of GTPase activity
14419 O_BomoEE22979_complete:A_BomoEE_comp70560_c0_seq18
107bp
14420 O_BomoEE2297_complete:A_BomoEE_comp33847_c0_seq2
112bp
14421 O_BomoEE22980_complete:A_BomoEE_comp70560_c0_seq20
436bp
 PREDICTED:_GTP_exchange_factor_for_ARFs_1_isoform_X2_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030155 P regulation of cell adhesion
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0032012 P regulation of ARF protein signal transduction
GO:0043547 P positive regulation of GTPase activity
14422 O_BomoEE22981_complete:A_BomoEE_comp70560_c0_seq20
107bp
14423 O_BomoEE22982_5prime_partial:A_BomoEE_comp70560_c0_seq21
412bp
 PREDICTED:_cytohesin-1_isoform_X3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030155 P regulation of cell adhesion
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0032012 P regulation of ARF protein signal transduction
GO:0043547 P positive regulation of GTPase activity
14424 O_BomoEE22983_internal:A_BomoEE_comp70560_c1_seq1
198bp
 PREDICTED:_mothers_against_decapentaplegic_homolog_4_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000790 C chromatin
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000987 F cis-regulatory region sequence-specific DNA binding
GO:0000988 F obsolete transcription factor activity, protein binding
GO:0001076 F obsolete transcription factor activity, RNA polymerase II transcription factor binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001085 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001541 P ovarian follicle development
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0001666 P response to hypoxia
GO:0001701 P in utero embryonic development
GO:0001702 P gastrulation with mouth forming second
GO:0001822 P kidney development
GO:0003190 P atrioventricular valve formation
GO:0003198 P epithelial to mesenchymal transition involved in endocardial cushion formation
GO:0003251 P positive regulation of cell proliferation involved in heart valve morphogenesis
GO:0003279 P cardiac septum development
GO:0003360 P brainstem development
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005518 F collagen binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006879 P cellular iron ion homeostasis
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007183 P SMAD protein complex assembly
GO:0007283 P spermatogenesis
GO:0007338 P single fertilization
GO:0007369 P gastrulation
GO:0007411 P axon guidance
GO:0007492 P endoderm development
GO:0007498 P mesoderm development
GO:0008283 P cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0008584 P male gonad development
GO:0008585 P female gonad development
GO:0009952 P anterior/posterior pattern specification
GO:0010718 P positive regulation of epithelial to mesenchymal transition
GO:0010862 P positive regulation of pathway-restricted SMAD protein phosphorylation
GO:0014033 P neural crest cell differentiation
GO:0017015 P regulation of transforming growth factor beta receptor signaling pathway
GO:0030308 P negative regulation of cell growth
GO:0030509 P BMP signaling pathway
GO:0030511 P positive regulation of transforming growth factor beta receptor signaling pathway
GO:0030513 P positive regulation of BMP signaling pathway
GO:0030616 F obsolete transforming growth factor beta receptor, common-partner cytoplasmic mediator activity
GO:0032444 C activin responsive factor complex
GO:0032525 P somite rostral/caudal axis specification
GO:0032909 P regulation of transforming growth factor beta2 production
GO:0033686 P positive regulation of luteinizing hormone secretion
GO:0035556 P intracellular signal transduction
GO:0036302 P atrioventricular canal development
GO:0042118 P endothelial cell activation
GO:0042127 P regulation of cell population proliferation
GO:0042177 P negative regulation of protein catabolic process
GO:0042733 P embryonic digit morphogenesis
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0046881 P positive regulation of follicle-stimulating hormone secretion
GO:0046982 F protein heterodimerization activity
GO:0048589 P developmental growth
GO:0048663 P neuron fate commitment
GO:0048729 P tissue morphogenesis
GO:0048733 P sebaceous gland development
GO:0048859 P formation of anatomical boundary
GO:0051098 P regulation of binding
GO:0051571 P positive regulation of histone H3-K4 methylation
GO:0051797 P regulation of hair follicle development
GO:0060021 P roof of mouth development
GO:0060065 P uterus development
GO:0060391 P positive regulation of SMAD protein signal transduction
GO:0060395 P SMAD protein signal transduction
GO:0060548 P negative regulation of cell death
GO:0060956 P endocardial cell differentiation
GO:0061040 P female gonad morphogenesis
GO:0070102 P interleukin-6-mediated signaling pathway
GO:0070411 F I-SMAD binding
GO:0070412 F R-SMAD binding
GO:0071141 C SMAD protein complex
GO:0071559 P response to transforming growth factor beta
GO:0072133 P metanephric mesenchyme morphogenesis
GO:0072134 P nephrogenic mesenchyme morphogenesis
GO:0072520 P seminiferous tubule development
GO:0090575 C RNA polymerase II transcription regulator complex
GO:2000617 P positive regulation of histone H3-K9 acetylation
14425 O_BomoEE22984_3prime_partial:A_BomoEE_comp70560_c3_seq1
244bp
 PREDICTED:_zinc_finger_protein_665_isoform_X2_[Bombyx_mori]
GO:0001085 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0016363 C nuclear matrix
GO:0030097 P hemopoiesis
GO:0030854 P positive regulation of granulocyte differentiation
GO:0045646 P regulation of erythrocyte differentiation
GO:0046872 F metal ion binding
GO:0051569 P regulation of histone H3-K4 methylation
GO:0051572 P negative regulation of histone H3-K4 methylation
GO:0051574 P positive regulation of histone H3-K9 methylation
14426 O_BomoEE22985_3prime_partial:A_BomoEE_comp70560_c3_seq2
271bp
 PREDICTED:_zinc_finger_protein_665_isoform_X2_[Bombyx_mori]
GO:0001085 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0016363 C nuclear matrix
GO:0030097 P hemopoiesis
GO:0030854 P positive regulation of granulocyte differentiation
GO:0045646 P regulation of erythrocyte differentiation
GO:0046872 F metal ion binding
GO:0051569 P regulation of histone H3-K4 methylation
GO:0051572 P negative regulation of histone H3-K4 methylation
GO:0051574 P positive regulation of histone H3-K9 methylation
14427 O_BomoEE22986_3prime_partial:A_BomoEE_comp70560_c3_seq3
244bp
 PREDICTED:_zinc_finger_protein_665_isoform_X2_[Bombyx_mori]
GO:0001085 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0016363 C nuclear matrix
GO:0030097 P hemopoiesis
GO:0030854 P positive regulation of granulocyte differentiation
GO:0045646 P regulation of erythrocyte differentiation
GO:0046872 F metal ion binding
GO:0051569 P regulation of histone H3-K4 methylation
GO:0051572 P negative regulation of histone H3-K4 methylation
GO:0051574 P positive regulation of histone H3-K9 methylation
14428 O_BomoEE22987_3prime_partial:A_BomoEE_comp70560_c3_seq4
244bp
 PREDICTED:_zinc_finger_protein_665_isoform_X2_[Bombyx_mori]
GO:0001085 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0016363 C nuclear matrix
GO:0030097 P hemopoiesis
GO:0030854 P positive regulation of granulocyte differentiation
GO:0045646 P regulation of erythrocyte differentiation
GO:0046872 F metal ion binding
GO:0051569 P regulation of histone H3-K4 methylation
GO:0051572 P negative regulation of histone H3-K4 methylation
GO:0051574 P positive regulation of histone H3-K9 methylation
14429 O_BomoEE22988_3prime_partial:A_BomoEE_comp70560_c3_seq5
271bp
 PREDICTED:_zinc_finger_protein_665_isoform_X2_[Bombyx_mori]
GO:0001085 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0016363 C nuclear matrix
GO:0030097 P hemopoiesis
GO:0030854 P positive regulation of granulocyte differentiation
GO:0045646 P regulation of erythrocyte differentiation
GO:0046872 F metal ion binding
GO:0051569 P regulation of histone H3-K4 methylation
GO:0051572 P negative regulation of histone H3-K4 methylation
GO:0051574 P positive regulation of histone H3-K9 methylation
14430 O_BomoEE22989_3prime_partial:A_BomoEE_comp70560_c3_seq6
271bp
 PREDICTED:_zinc_finger_protein_665_isoform_X2_[Bombyx_mori]
GO:0001085 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0016363 C nuclear matrix
GO:0030097 P hemopoiesis
GO:0030854 P positive regulation of granulocyte differentiation
GO:0045646 P regulation of erythrocyte differentiation
GO:0046872 F metal ion binding
GO:0051569 P regulation of histone H3-K4 methylation
GO:0051572 P negative regulation of histone H3-K4 methylation
GO:0051574 P positive regulation of histone H3-K9 methylation
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