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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
13831 O_BomoEE22449_complete:A_BomoEE_comp70411_c0_seq2
125bp
13832 O_BomoEE2244_complete:A_BomoEE_comp33741_c0_seq1
154bp
 PREDICTED:_glutamyl-tRNA(Gln)_amidotransferase_subunit_C,_mitochondrial_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
13833 O_BomoEE22450_complete:A_BomoEE_comp70411_c0_seq2
111bp
13834 O_BomoEE22451_complete:A_BomoEE_comp70411_c0_seq3
473bp
 PREDICTED:_uncharacterized_protein_LOC106129698_[Amyelois_transitella]
13835 O_BomoEE22452_complete:A_BomoEE_comp70411_c0_seq3
125bp
13836 O_BomoEE22453_complete:A_BomoEE_comp70411_c0_seq3
111bp
13837 O_BomoEE22454_complete:A_BomoEE_comp70411_c0_seq4
416bp
 PREDICTED:_uncharacterized_protein_LOC106129698_[Amyelois_transitella]
13838 O_BomoEE22455_complete:A_BomoEE_comp70411_c0_seq4
160bp
 PREDICTED:_uncharacterized_protein_LOC101736656_[Bombyx_mori]
13839 O_BomoEE22456_complete:A_BomoEE_comp70411_c0_seq4
125bp
13840 O_BomoEE22457_complete:A_BomoEE_comp70411_c0_seq5
416bp
 PREDICTED:_uncharacterized_protein_LOC106129698_[Amyelois_transitella]
13841 O_BomoEE22458_complete:A_BomoEE_comp70411_c0_seq5
125bp
13842 O_BomoEE22459_complete:A_BomoEE_comp70411_c0_seq5
122bp
13843 O_BomoEE2245_complete:A_BomoEE_comp33741_c0_seq2
319bp
 DNA_polymerase_accessory_subunit_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0071897 P DNA biosynthetic process
13844 O_BomoEE22460_5prime_partial:A_BomoEE_comp70412_c0_seq1
481bp
 PREDICTED:_protein_disabled_[Bombyx_mori]
13845 O_BomoEE22461_3prime_partial:A_BomoEE_comp70412_c0_seq1
134bp
13846 O_BomoEE22462_complete:A_BomoEE_comp70412_c0_seq1
128bp
13847 O_BomoEE22463_complete:A_BomoEE_comp70412_c0_seq1
114bp
13848 O_BomoEE22464_complete:A_BomoEE_comp70413_c0_seq1
332bp
 transcription_factor_AP-4_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006461 P protein-containing complex assembly
GO:0006978 P DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
GO:0008285 P negative regulation of cell population proliferation
GO:0010629 P negative regulation of gene expression
GO:0017053 C transcription repressor complex
GO:0042803 F protein homodimerization activity
GO:0042826 F histone deacetylase binding
GO:0043065 P positive regulation of apoptotic process
GO:0043392 P negative regulation of DNA binding
GO:0043565 F sequence-specific DNA binding
GO:0043922 P negative regulation by host of viral transcription
GO:0043923 P positive regulation by host of viral transcription
GO:0044212 F transcription cis-regulatory region binding
GO:0045736 P negative regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0070888 F E-box binding
GO:0071157 P regulation of cell cycle
GO:0071549 P cellular response to dexamethasone stimulus
GO:2001269 P positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway
13849 O_BomoEE22465_internal:A_BomoEE_comp70414_c0_seq1
135bp
13850 O_BomoEE22466_5prime_partial:A_BomoEE_comp70414_c0_seq1
100bp
 PREDICTED:_nascent_polypeptide-associated_complex_subunit_alpha,_muscle-specific_form-like_[Bombyx_mori]
13851 O_BomoEE22467_5prime_partial:A_BomoEE_comp70414_c0_seq2
104bp
 PREDICTED:_nascent_polypeptide-associated_complex_subunit_alpha,_muscle-specific_form-like_[Bombyx_mori]
13852 O_BomoEE22468_3prime_partial:A_BomoEE_comp70414_c0_seq2
100bp
13853 O_BomoEE22469_complete:A_BomoEE_comp70415_c0_seq1
354bp
 PREDICTED:_beta-1,3-galactosyltransferase_2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005575 C cellular_component
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0008378 F galactosyltransferase activity
GO:0008499 F UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity
GO:0009312 P oligosaccharide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
13854 O_BomoEE2246_complete:A_BomoEE_comp33741_c0_seq2
154bp
 PREDICTED:_glutamyl-tRNA(Gln)_amidotransferase_subunit_C,_mitochondrial_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
13855 O_BomoEE22470_complete:A_BomoEE_comp70415_c0_seq1
140bp
 PREDICTED:_uncharacterized_protein_LOC101742634_[Bombyx_mori]
13856 O_BomoEE22471_complete:A_BomoEE_comp70415_c0_seq2
275bp
 PREDICTED:_beta-1,3-galactosyltransferase_2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0008378 F galactosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
13857 O_BomoEE22472_complete:A_BomoEE_comp70415_c0_seq2
140bp
 PREDICTED:_uncharacterized_protein_LOC101742634_[Bombyx_mori]
13858 O_BomoEE22473_complete:A_BomoEE_comp70415_c0_seq3
354bp
 PREDICTED:_beta-1,3-galactosyltransferase_2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005575 C cellular_component
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0008378 F galactosyltransferase activity
GO:0008499 F UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity
GO:0009312 P oligosaccharide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
13859 O_BomoEE22474_complete:A_BomoEE_comp70415_c0_seq3
151bp
 PREDICTED:_uncharacterized_protein_LOC101742634_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0007096 P regulation of exit from mitosis
13860 O_BomoEE22475_complete:A_BomoEE_comp70415_c0_seq3
128bp
 PREDICTED:_uncharacterized_protein_LOC101742634_[Bombyx_mori]
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