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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11761 O_BomoEE20586_3prime_partial:A_BomoEE_comp70029_c0_seq3
237bp
 PREDICTED:_uncharacterized_protein_LOC101743760_[Bombyx_mori]
11762 O_BomoEE20587_5prime_partial:A_BomoEE_comp70029_c0_seq3
215bp
11763 O_BomoEE20588_complete:A_BomoEE_comp70032_c1_seq1
309bp
 CRAL-TRIO_domain-containing_protein,_partial_[Manduca_sexta]
GO:0001890 P placenta development
GO:0001892 P embryonic placenta development
GO:0005215 F transporter activity
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005770 C late endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0007584 P response to nutrient
GO:0008289 F lipid binding
GO:0008431 F vitamin E binding
GO:0009268 P response to pH
GO:0009636 P response to toxic substance
GO:0019842 F vitamin binding
GO:0032502 P developmental process
GO:0042360 P vitamin E metabolic process
GO:0043325 F phosphatidylinositol-3,4-bisphosphate binding
GO:0046909 P obsolete intermembrane transport
GO:0051180 P vitamin transport
GO:0051452 P intracellular pH reduction
GO:0060548 P negative regulation of cell death
GO:0090212 P negative regulation of establishment of blood-brain barrier
11764 O_BomoEE20589_5prime_partial:A_BomoEE_comp70035_c1_seq1
505bp
 PREDICTED:_uncharacterized_protein_LOC101742065_isoform_X1_[Bombyx_mori]
11765 O_BomoEE2058_complete:A_BomoEE_comp33438_c0_seq1
350bp
 PREDICTED:_collagen_alpha-2(VIII)_chain_[Bombyx_mori]
11766 O_BomoEE20590_complete:A_BomoEE_comp70035_c1_seq1
122bp
11767 O_BomoEE20591_complete:A_BomoEE_comp70035_c1_seq1
121bp
11768 O_BomoEE20592_complete:A_BomoEE_comp70035_c1_seq1
104bp
11769 O_BomoEE20593_complete:A_BomoEE_comp70035_c1_seq1
100bp
11770 O_BomoEE20594_5prime_partial:A_BomoEE_comp70035_c1_seq2
505bp
 PREDICTED:_uncharacterized_protein_LOC101742065_isoform_X1_[Bombyx_mori]
11771 O_BomoEE20595_complete:A_BomoEE_comp70035_c1_seq2
122bp
11772 O_BomoEE20596_complete:A_BomoEE_comp70035_c1_seq2
121bp
11773 O_BomoEE20597_complete:A_BomoEE_comp70035_c1_seq2
104bp
11774 O_BomoEE20598_complete:A_BomoEE_comp70035_c1_seq2
100bp
11775 O_BomoEE20599_complete:A_BomoEE_comp70036_c0_seq1
206bp
 PREDICTED:_TPPP_family_protein_CG45057-like_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0048812 P neuron projection morphogenesis
11776 O_BomoEE2059_complete:A_BomoEE_comp33438_c0_seq1
222bp
11777 O_BomoEE205_5prime_partial:A_BomoEE_comp3127_c0_seq1
101bp
11778 O_BomoEE20600_complete:A_BomoEE_comp70036_c0_seq1
162bp
11779 O_BomoEE20601_complete:A_BomoEE_comp70036_c0_seq2
206bp
 PREDICTED:_TPPP_family_protein_CG45057-like_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0048812 P neuron projection morphogenesis
11780 O_BomoEE20602_complete:A_BomoEE_comp70036_c0_seq2
101bp
11781 O_BomoEE20603_complete:A_BomoEE_comp70036_c0_seq3
206bp
 PREDICTED:_TPPP_family_protein_CG45057-like_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0048812 P neuron projection morphogenesis
11782 O_BomoEE20604_complete:A_BomoEE_comp70036_c0_seq3
167bp
11783 O_BomoEE20605_complete:A_BomoEE_comp70037_c0_seq1
219bp
 polyadenylate_binding_protein_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006378 P mRNA polyadenylation
GO:0006397 P mRNA processing
GO:0008143 F poly(A) binding
GO:0022008 P neurogenesis
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
11784 O_BomoEE20606_complete:A_BomoEE_comp70037_c1_seq1
134bp
 ribosomal_protein_S17_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
11785 O_BomoEE20607_complete:A_BomoEE_comp70037_c2_seq1
847bp
 PREDICTED:_zinc_finger_protein_1_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007280 P pole cell migration
GO:0007399 P nervous system development
GO:0007417 P central nervous system development
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0007516 P hemocyte development
GO:0007517 P muscle organ development
GO:0008045 P motor neuron axon guidance
GO:0008354 P germ cell migration
GO:0008406 P gonad development
GO:0019730 P antimicrobial humoral response
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0048103 P somatic stem cell division
GO:0048542 P lymph gland development
GO:0061321 P garland nephrocyte differentiation
11786 O_BomoEE20608_complete:A_BomoEE_comp70037_c2_seq1
118bp
11787 O_BomoEE20609_complete:A_BomoEE_comp70037_c2_seq2
841bp
 PREDICTED:_zinc_finger_protein_1_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007280 P pole cell migration
GO:0007399 P nervous system development
GO:0007417 P central nervous system development
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0007516 P hemocyte development
GO:0007517 P muscle organ development
GO:0008045 P motor neuron axon guidance
GO:0008354 P germ cell migration
GO:0008406 P gonad development
GO:0019730 P antimicrobial humoral response
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0048103 P somatic stem cell division
GO:0048542 P lymph gland development
GO:0061321 P garland nephrocyte differentiation
11788 O_BomoEE2060_complete:A_BomoEE_comp33438_c0_seq1
140bp
11789 O_BomoEE20610_complete:A_BomoEE_comp70037_c2_seq2
112bp
11790 O_BomoEE20611_complete:A_BomoEE_comp70038_c1_seq1
414bp
 PREDICTED:_ETS-like_protein_pointed,_isoform_P2/D_isoform_X3_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001501 P skeletal system development
GO:0001712 P ectodermal cell fate commitment
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007498 P mesoderm development
GO:0030154 P cell differentiation
GO:0035259 F glucocorticoid receptor binding
GO:0043565 F sequence-specific DNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0090009 P primitive streak formation
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