SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/95730
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11161 O_BomoEE20045_complete:A_BomoEE_comp69931_c0_seq3
180bp
 PREDICTED:_nose_resistant_to_fluoxetine_protein_6_[Bombyx_mori]
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
11162 O_BomoEE20046_complete:A_BomoEE_comp69933_c0_seq1
376bp
 PREDICTED:_transmembrane_protein_adipocyte-associated_1_homolog_isoform_X2_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
11163 O_BomoEE20047_complete:A_BomoEE_comp69933_c0_seq2
287bp
 PREDICTED:_transmembrane_protein_adipocyte-associated_1_homolog_isoform_X2_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
11164 O_BomoEE20048_3prime_partial:A_BomoEE_comp69935_c0_seq1
242bp
 PREDICTED:_uncharacterized_protein_LOC101738544_isoform_X3_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0006508 P proteolysis
GO:0006979 P response to oxidative stress
GO:0008270 F zinc ion binding
GO:0009408 P response to heat
GO:0045471 P response to ethanol
GO:0046872 F metal ion binding
GO:0048149 P behavioral response to ethanol
GO:0071567 F UFM1 hydrolase activity
11165 O_BomoEE20049_complete:A_BomoEE_comp69935_c0_seq2
225bp
 PREDICTED:_uncharacterized_protein_LOC101738544_isoform_X3_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0006508 P proteolysis
GO:0006979 P response to oxidative stress
GO:0008270 F zinc ion binding
GO:0009408 P response to heat
GO:0045471 P response to ethanol
GO:0046872 F metal ion binding
GO:0048149 P behavioral response to ethanol
GO:0071567 F UFM1 hydrolase activity
11166 O_BomoEE2004_complete:A_BomoEE_comp33319_c0_seq1
121bp
 PREDICTED:_huntingtin-interacting_protein_K_isoform_X1_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008150 P biological_process
GO:0015630 C microtubule cytoskeleton
11167 O_BomoEE20050_complete:A_BomoEE_comp69936_c0_seq1
1085bp
 PREDICTED:_uncharacterized_protein_LOC101745993_[Bombyx_mori]
11168 O_BomoEE20051_complete:A_BomoEE_comp69936_c0_seq2
1085bp
 PREDICTED:_uncharacterized_protein_LOC101745993_[Bombyx_mori]
11169 O_BomoEE20052_complete:A_BomoEE_comp69936_c0_seq3
1085bp
 PREDICTED:_uncharacterized_protein_LOC101745993_[Bombyx_mori]
11170 O_BomoEE20053_complete:A_BomoEE_comp69936_c0_seq3
186bp
 PREDICTED:_uncharacterized_protein_LOC101745993_[Bombyx_mori]
11171 O_BomoEE20054_complete:A_BomoEE_comp69936_c0_seq4
1323bp
 PREDICTED:_uncharacterized_protein_LOC101745993_[Bombyx_mori]
11172 O_BomoEE20055_complete:A_BomoEE_comp69936_c0_seq5
1085bp
 PREDICTED:_uncharacterized_protein_LOC101745993_[Bombyx_mori]
11173 O_BomoEE20056_complete:A_BomoEE_comp69936_c0_seq5
186bp
 PREDICTED:_uncharacterized_protein_LOC101745993_[Bombyx_mori]
11174 O_BomoEE20057_complete:A_BomoEE_comp69936_c0_seq6
1189bp
 PREDICTED:_uncharacterized_protein_LOC101745993_[Bombyx_mori]
11175 O_BomoEE20058_5prime_partial:A_BomoEE_comp69936_c0_seq7
113bp
 PREDICTED:_uncharacterized_protein_LOC101745993_[Bombyx_mori]
11176 O_BomoEE20059_complete:A_BomoEE_comp69937_c0_seq1
1191bp
 PREDICTED:_maestro_heat-like_repeat-containing_protein_family_member_1_[Bombyx_mori]
11177 O_BomoEE2005_complete:A_BomoEE_comp33323_c0_seq1
940bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_DNA_topoisomerase_I,_mitochondrial_[Bombyx_mori]
GO:0002168 P instar larval development
GO:0003677 F DNA binding
GO:0003916 F DNA topoisomerase activity
GO:0003917 F DNA topoisomerase type I (single strand cut, ATP-independent) activity
GO:0003918 F DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0005719 C euchromatin
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006260 P DNA replication
GO:0006265 P DNA topological change
GO:0006338 P chromatin remodeling
GO:0007059 P chromosome segregation
GO:0007275 P multicellular organism development
GO:0008283 P cell population proliferation
GO:0016853 F isomerase activity
GO:0030261 P chromosome condensation
GO:0031298 C replication fork protection complex
GO:0045995 P regulation of embryonic development
GO:0048477 P oogenesis
11178 O_BomoEE20060_complete:A_BomoEE_comp69937_c0_seq2
1652bp
 PREDICTED:_maestro_heat-like_repeat-containing_protein_family_member_1_[Bombyx_mori]
11179 O_BomoEE20061_complete:A_BomoEE_comp69937_c0_seq2
123bp
11180 O_BomoEE20062_5prime_partial:A_BomoEE_comp69937_c0_seq3
253bp
 PREDICTED:_maestro_heat-like_repeat-containing_protein_family_member_1_[Bombyx_mori]
11181 O_BomoEE20063_complete:A_BomoEE_comp69937_c0_seq4
257bp
 PREDICTED:_maestro_heat-like_repeat-containing_protein_family_member_1_[Bombyx_mori]
11182 O_BomoEE20064_internal:A_BomoEE_comp69938_c1_seq1
213bp
 PREDICTED:_protein_mahjong_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0016567 P protein ubiquitination
GO:0035212 P cell competition in a multicellular organism
11183 O_BomoEE20065_complete:A_BomoEE_comp69939_c0_seq1
510bp
 PREDICTED:_uncharacterized_protein_LOC106137717_[Amyelois_transitella]
11184 O_BomoEE20066_3prime_partial:A_BomoEE_comp69941_c0_seq1
500bp
 PREDICTED:_rotatin-like_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0007275 P multicellular organism development
GO:0007368 P determination of left/right symmetry
GO:0036064 C ciliary basal body
GO:0042995 C cell projection
GO:0044782 P cilium organization
11185 O_BomoEE20067_complete:A_BomoEE_comp69941_c0_seq1
424bp
 PREDICTED:_rotatin-like_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0007275 P multicellular organism development
GO:0007368 P determination of left/right symmetry
GO:0016021 C integral component of membrane
GO:0036064 C ciliary basal body
GO:0042995 C cell projection
GO:0044782 P cilium organization
11186 O_BomoEE20068_3prime_partial:A_BomoEE_comp69941_c0_seq2
500bp
 PREDICTED:_rotatin-like_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0007275 P multicellular organism development
GO:0007368 P determination of left/right symmetry
GO:0036064 C ciliary basal body
GO:0042995 C cell projection
GO:0044782 P cilium organization
11187 O_BomoEE20069_complete:A_BomoEE_comp69941_c0_seq2
301bp
 PREDICTED:_rotatin-like_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0007275 P multicellular organism development
GO:0007368 P determination of left/right symmetry
GO:0016021 C integral component of membrane
GO:0036064 C ciliary basal body
GO:0042995 C cell projection
GO:0044782 P cilium organization
11188 O_BomoEE2006_complete:A_BomoEE_comp33323_c0_seq1
513bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_ATPase_WRNIP1-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000731 P DNA synthesis involved in DNA repair
GO:0003677 F DNA binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030174 P regulation of DNA-dependent DNA replication initiation
GO:0046872 F metal ion binding
11189 O_BomoEE20070_3prime_partial:A_BomoEE_comp69941_c0_seq3
935bp
 PREDICTED:_rotatin-like_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0007275 P multicellular organism development
GO:0007368 P determination of left/right symmetry
GO:0016021 C integral component of membrane
GO:0036064 C ciliary basal body
GO:0042995 C cell projection
GO:0044782 P cilium organization
11190 O_BomoEE20071_3prime_partial:A_BomoEE_comp69941_c0_seq4
663bp
 PREDICTED:_rotatin-like_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0007275 P multicellular organism development
GO:0007368 P determination of left/right symmetry
GO:0016021 C integral component of membrane
GO:0036064 C ciliary basal body
GO:0042995 C cell projection
GO:0044782 P cilium organization
previous next from show/95730

- SilkBase 1999-2023 -