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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11131 O_BomoEE20018_complete:A_BomoEE_comp69917_c0_seq4
172bp
 PREDICTED:_tetracycline_resistance_protein,_class_D-like_[Amyelois_transitella]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
11132 O_BomoEE20019_complete:A_BomoEE_comp69920_c0_seq2
137bp
 PREDICTED:_uncharacterized_protein_LOC105841766_[Bombyx_mori]
11133 O_BomoEE2001_complete:A_BomoEE_comp33311_c1_seq1
303bp
 PREDICTED:_uncharacterized_protein_LOC101735988_[Bombyx_mori]
11134 O_BomoEE20020_complete:A_BomoEE_comp69921_c0_seq2
172bp
 N-cetylglucosamine-6-phosphate_deacetylase_[Spodoptera_litura]
GO:0005634 C nucleus
GO:0005975 P carbohydrate metabolic process
GO:0006044 P N-acetylglucosamine metabolic process
GO:0006046 P N-acetylglucosamine catabolic process
GO:0008448 F N-acetylglucosamine-6-phosphate deacetylase activity
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0019262 P N-acetylneuraminate catabolic process
GO:0046872 F metal ion binding
11135 O_BomoEE20021_complete:A_BomoEE_comp69921_c0_seq3
399bp
 N-cetylglucosamine-6-phosphate_deacetylase_[Spodoptera_litura]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005975 P carbohydrate metabolic process
GO:0006044 P N-acetylglucosamine metabolic process
GO:0006046 P N-acetylglucosamine catabolic process
GO:0008150 P biological_process
GO:0008448 F N-acetylglucosamine-6-phosphate deacetylase activity
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0046872 F metal ion binding
11136 O_BomoEE20022_complete:A_BomoEE_comp69921_c0_seq4
169bp
 N-cetylglucosamine-6-phosphate_deacetylase_[Spodoptera_litura]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005975 P carbohydrate metabolic process
GO:0006044 P N-acetylglucosamine metabolic process
GO:0006046 P N-acetylglucosamine catabolic process
GO:0008150 P biological_process
GO:0008448 F N-acetylglucosamine-6-phosphate deacetylase activity
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0046872 F metal ion binding
11137 O_BomoEE20023_complete:A_BomoEE_comp69921_c0_seq5
295bp
 N-cetylglucosamine-6-phosphate_deacetylase_[Spodoptera_litura]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005975 P carbohydrate metabolic process
GO:0006044 P N-acetylglucosamine metabolic process
GO:0006046 P N-acetylglucosamine catabolic process
GO:0008150 P biological_process
GO:0008448 F N-acetylglucosamine-6-phosphate deacetylase activity
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0046872 F metal ion binding
11138 O_BomoEE20024_complete:A_BomoEE_comp69922_c0_seq3
238bp
 Transmembrane_protein_189_[Papilio_xuthus]
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0031625 F ubiquitin protein ligase binding
GO:0061630 F ubiquitin protein ligase activity
11139 O_BomoEE20025_complete:A_BomoEE_comp69922_c0_seq3
104bp
11140 O_BomoEE20026_complete:A_BomoEE_comp69922_c0_seq4
316bp
 PREDICTED:_transmembrane_protein_189_isoform_X1_[Papilio_xuthus]
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0031625 F ubiquitin protein ligase binding
GO:0061630 F ubiquitin protein ligase activity
11141 O_BomoEE20027_complete:A_BomoEE_comp69922_c0_seq4
104bp
11142 O_BomoEE20028_complete:A_BomoEE_comp69922_c0_seq5
161bp
 PREDICTED:_transmembrane_protein_189_isoform_X2_[Papilio_xuthus]
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0031625 F ubiquitin protein ligase binding
GO:0061630 F ubiquitin protein ligase activity
11143 O_BomoEE20029_complete:A_BomoEE_comp69922_c0_seq6
171bp
 putative_ubiquitin-conjugating_enzyme_[Danaus_plexippus]
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0031625 F ubiquitin protein ligase binding
GO:0061630 F ubiquitin protein ligase activity
11144 O_BomoEE2002_complete:A_BomoEE_comp33311_c1_seq1
120bp
 small_nuclear_ribonucleoprotein_sm_d2_[Bombyx_mori]
GO:0000387 P spliceosomal snRNP assembly
GO:0000395 P mRNA 5'-splice site recognition
GO:0000974 C Prp19 complex
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0005685 C U1 snRNP
GO:0005686 C U2 snRNP
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071004 C U2-type prespliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
11145 O_BomoEE20030_complete:A_BomoEE_comp69922_c0_seq6
161bp
 PREDICTED:_transmembrane_protein_189_isoform_X2_[Papilio_xuthus]
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0031625 F ubiquitin protein ligase binding
GO:0061630 F ubiquitin protein ligase activity
11146 O_BomoEE20031_complete:A_BomoEE_comp69922_c0_seq7
171bp
 putative_ubiquitin-conjugating_enzyme_[Danaus_plexippus]
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0031625 F ubiquitin protein ligase binding
GO:0061630 F ubiquitin protein ligase activity
11147 O_BomoEE20032_complete:A_BomoEE_comp69922_c0_seq9
128bp
 putative_ubiquitin-conjugating_enzyme_[Danaus_plexippus]
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0031625 F ubiquitin protein ligase binding
GO:0061630 F ubiquitin protein ligase activity
11148 O_BomoEE20033_complete:A_BomoEE_comp69922_c0_seq10
206bp
 putative_ubiquitin-conjugating_enzyme_[Danaus_plexippus]
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0031625 F ubiquitin protein ligase binding
GO:0061630 F ubiquitin protein ligase activity
11149 O_BomoEE20034_internal:A_BomoEE_comp69925_c0_seq1
245bp
 hypothetical_protein_RF55_20194_[Lasius_niger]
11150 O_BomoEE20035_5prime_partial:A_BomoEE_comp69925_c0_seq2
256bp
 PREDICTED:_uncharacterized_protein_LOC105387936_[Plutella_xylostella]
11151 O_BomoEE20036_complete:A_BomoEE_comp69926_c0_seq1
777bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_DNA_excision_repair_protein_haywire_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000990 F obsolete transcription factor activity, core RNA polymerase binding
GO:0001111 P promoter clearance from RNA polymerase II promoter
GO:0001113 P transcription open complex formation at RNA polymerase II promoter
GO:0003677 F DNA binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0043140 F 3'-5' DNA helicase activity
GO:1903506 P regulation of nucleic acid-templated transcription
11152 O_BomoEE20037_complete:A_BomoEE_comp69926_c0_seq1
180bp
 PREDICTED:_chromosome_transmission_fidelity_protein_8_homolog_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0007049 P cell cycle
GO:0031390 C Ctf18 RFC-like complex
GO:0043142 F single-stranded DNA helicase activity
GO:1900264 P positive regulation of DNA-directed DNA polymerase activity
11153 O_BomoEE20038_complete:A_BomoEE_comp69926_c0_seq2
113bp
 PREDICTED:_chromosome_transmission_fidelity_protein_8_homolog_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0007049 P cell cycle
GO:0031390 C Ctf18 RFC-like complex
GO:0043142 F single-stranded DNA helicase activity
GO:1900264 P positive regulation of DNA-directed DNA polymerase activity
11154 O_BomoEE20039_complete:A_BomoEE_comp69926_c0_seq3
777bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_DNA_excision_repair_protein_haywire_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000990 F obsolete transcription factor activity, core RNA polymerase binding
GO:0001111 P promoter clearance from RNA polymerase II promoter
GO:0001113 P transcription open complex formation at RNA polymerase II promoter
GO:0003677 F DNA binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0043140 F 3'-5' DNA helicase activity
GO:1903506 P regulation of nucleic acid-templated transcription
11155 O_BomoEE2003_complete:A_BomoEE_comp33311_c1_seq1
103bp
 hypothetical_protein_ALC53_04638_[Atta_colombica]
11156 O_BomoEE20040_complete:A_BomoEE_comp69926_c0_seq4
777bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_DNA_excision_repair_protein_haywire_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000990 F obsolete transcription factor activity, core RNA polymerase binding
GO:0001111 P promoter clearance from RNA polymerase II promoter
GO:0001113 P transcription open complex formation at RNA polymerase II promoter
GO:0003677 F DNA binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0043140 F 3'-5' DNA helicase activity
GO:1903506 P regulation of nucleic acid-templated transcription
11157 O_BomoEE20041_internal:A_BomoEE_comp69927_c1_seq2
106bp
11158 O_BomoEE20042_internal:A_BomoEE_comp69927_c1_seq2
106bp
 PREDICTED:_serine/threonine-protein_kinase_SMG1-like_[Bombyx_mori]
11159 O_BomoEE20043_complete:A_BomoEE_comp69927_c1_seq4
360bp
 hypothetical_protein_KGM_15486_[Danaus_plexippus]
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006855 P xenobiotic transmembrane transport
GO:0006869 P lipid transport
GO:0010976 P positive regulation of neuron projection development
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0030658 C transport vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0036010 P protein localization to endosome
GO:0045332 P phospholipid translocation
GO:0070863 P positive regulation of protein exit from endoplasmic reticulum
11160 O_BomoEE20044_3prime_partial:A_BomoEE_comp69931_c0_seq1
117bp
 PREDICTED:_nose_resistant_to_fluoxetine_protein_6_[Bombyx_mori]
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