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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10531 O_BomoEE1947_3prime_partial:A_BomoEE_comp33172_c0_seq1
101bp
10532 O_BomoEE19480_complete:A_BomoEE_comp69760_c0_seq2
306bp
 putative_AMP_dependent_ligase_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
GO:0016878 F acid-thiol ligase activity
10533 O_BomoEE19481_complete:A_BomoEE_comp69760_c0_seq2
220bp
10534 O_BomoEE19482_complete:A_BomoEE_comp69760_c0_seq3
966bp
 PREDICTED:_acyl-CoA_synthetase_family_member_4_homolog_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
GO:0016878 F acid-thiol ligase activity
10535 O_BomoEE19483_complete:A_BomoEE_comp69760_c0_seq3
209bp
10536 O_BomoEE19484_complete:A_BomoEE_comp69760_c0_seq4
346bp
 putative_AMP_dependent_ligase_[Operophtera_brumata]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003824 F catalytic activity
GO:0004043 F L-aminoadipate-semialdehyde dehydrogenase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016874 F ligase activity
GO:0016878 F acid-thiol ligase activity
GO:0019482 P beta-alanine metabolic process
GO:0043041 P amino acid activation for nonribosomal peptide biosynthetic process
GO:0055114 P obsolete oxidation-reduction process
10537 O_BomoEE19485_complete:A_BomoEE_comp69760_c0_seq4
306bp
 putative_AMP_dependent_ligase_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
GO:0016878 F acid-thiol ligase activity
10538 O_BomoEE19486_complete:A_BomoEE_comp69760_c0_seq4
220bp
10539 O_BomoEE19487_5prime_partial:A_BomoEE_comp69762_c1_seq1
243bp
10540 O_BomoEE19488_5prime_partial:A_BomoEE_comp69762_c1_seq1
224bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_facilitated_trehalose_transporter_Tret1-2_homolog_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
10541 O_BomoEE19489_complete:A_BomoEE_comp69765_c0_seq2
235bp
 Helix-loop-helix_protein_2_[Papilio_xuthus]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0030154 P cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046983 F protein dimerization activity
10542 O_BomoEE1948_complete:A_BomoEE_comp33179_c0_seq1
564bp
 PREDICTED:_chromatin_assembly_factor_1_subunit_B_[Papilio_machaon]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006334 P nucleosome assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0031497 P chromatin assembly
GO:0033186 C CAF-1 complex
GO:0042393 F histone binding
10543 O_BomoEE19490_complete:A_BomoEE_comp69765_c0_seq3
109bp
 PREDICTED:_uncharacterized_protein_LOC106120066_[Papilio_xuthus]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0030154 P cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046983 F protein dimerization activity
10544 O_BomoEE19491_complete:A_BomoEE_comp69765_c0_seq3
105bp
 Sage-protein,_partial_[Operophtera_brumata]
10545 O_BomoEE19492_complete:A_BomoEE_comp69765_c0_seq4
105bp
 Sage-protein,_partial_[Operophtera_brumata]
10546 O_BomoEE19493_complete:A_BomoEE_comp69765_c0_seq6
235bp
 Helix-loop-helix_protein_2_[Papilio_xuthus]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0030154 P cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046983 F protein dimerization activity
10547 O_BomoEE19494_complete:A_BomoEE_comp69765_c0_seq7
109bp
 PREDICTED:_uncharacterized_protein_LOC106120066_[Papilio_xuthus]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0030154 P cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046983 F protein dimerization activity
10548 O_BomoEE19495_complete:A_BomoEE_comp69765_c0_seq7
105bp
 Sage-protein,_partial_[Operophtera_brumata]
10549 O_BomoEE19496_complete:A_BomoEE_comp69765_c0_seq8
105bp
 Sage-protein,_partial_[Operophtera_brumata]
10550 O_BomoEE19497_3prime_partial:A_BomoEE_comp69769_c0_seq1
256bp
 PREDICTED:_sorting_nexin-7-like_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0015031 P protein transport
GO:0016050 P vesicle organization
GO:0019898 C extrinsic component of membrane
GO:0035091 F phosphatidylinositol binding
10551 O_BomoEE19498_5prime_partial:A_BomoEE_comp69769_c0_seq1
109bp
10552 O_BomoEE19499_complete:A_BomoEE_comp69769_c0_seq3
192bp
 PREDICTED:_sorting_nexin-7-like_[Bombyx_mori]
GO:0005768 C endosome
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016050 P vesicle organization
GO:0019898 C extrinsic component of membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
10553 O_BomoEE1949_complete:A_BomoEE_comp33179_c0_seq1
102bp
10554 O_BomoEE194_5prime_partial:A_BomoEE_comp3032_c0_seq1
140bp
10555 O_BomoEE19500_complete:A_BomoEE_comp69771_c1_seq2
215bp
 PREDICTED:_protein_unc-119_homolog_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0007399 P nervous system development
GO:0008289 F lipid binding
GO:0015031 P protein transport
10556 O_BomoEE19501_complete:A_BomoEE_comp69771_c1_seq4
215bp
 Protein_unc-119-like_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0007399 P nervous system development
GO:0008289 F lipid binding
GO:0015031 P protein transport
10557 O_BomoEE19502_complete:A_BomoEE_comp69775_c0_seq1
769bp
 PREDICTED:_uncharacterized_protein_LOC101744810_isoform_X2_[Bombyx_mori]
10558 O_BomoEE19503_complete:A_BomoEE_comp69775_c0_seq1
123bp
10559 O_BomoEE19504_complete:A_BomoEE_comp69775_c0_seq2
738bp
 PREDICTED:_uncharacterized_protein_LOC101744810_isoform_X2_[Bombyx_mori]
10560 O_BomoEE19505_complete:A_BomoEE_comp69775_c0_seq2
123bp
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