Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
1	O_SariMSG10000_internal:A_SariMSG_c23630_g1_i1 221bp		uncharacterized_protein_LOC110383269_[Helicoverpa_armigera]
2	O_SariMSG10001_complete:A_SariMSG_c23631_g1_i1 221bp		PREDICTED:_uncharacterized_protein_LOC106137432_[Amyelois_transitella]
3	O_SariMSG10002_5prime_partial:A_SariMSG_c23631_g1_i2 235bp		PREDICTED:_uncharacterized_protein_LOC106137432_[Amyelois_transitella]
4	O_SariMSG10003_5prime_partial:A_SariMSG_c23632_g1_i1 258bp		PREDICTED:_protein_lin-49,_partial_[Amyelois_transitella]	GO:0003677 F DNA binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0008270 F zinc ion binding GO:0016568 P chromatin organization GO:0043966 P histone H3 acetylation GO:0045893 P positive regulation of transcription, DNA-templated GO:0046872 F metal ion binding GO:0070776 C MOZ/MORF histone acetyltransferase complex GO:1901796 P regulation of signal transduction by p53 class mediator
5	O_SariMSG10004_internal:A_SariMSG_c23633_g1_i1 153bp		endoribonuclease_Dicer_isoform_X2_[Helicoverpa_armigera]	GO:0000003 P reproduction GO:0000166 F nucleotide binding GO:0000737 P DNA catabolic process, endonucleolytic GO:0002119 P nematode larval development GO:0003677 F DNA binding GO:0003723 F RNA binding GO:0004386 F helicase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0004525 F ribonuclease III activity GO:0004530 F deoxyribonuclease I activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006309 P apoptotic DNA fragmentation GO:0006396 P RNA processing GO:0006401 P RNA catabolic process GO:0008355 P olfactory learning GO:0016075 P rRNA catabolic process GO:0016442 C RISC complex GO:0016787 F hydrolase activity GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters GO:0030422 P production of siRNA involved in RNA interference GO:0031047 P gene silencing by RNA GO:0031050 P dsRNA processing GO:0031054 P pre-miRNA processing GO:0035262 P gonad morphogenesis GO:0040034 P regulation of development, heterochronic GO:0046872 F metal ion binding GO:0090501 P RNA phosphodiester bond hydrolysis GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic GO:2000636 P positive regulation of primary miRNA processing
6	O_SariMSG10005_internal:A_SariMSG_c23635_g1_i1 320bp		guanine_nucleotide-releasing_factor_2_isoform_X12_[Bombyx_mori]	GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005088 F guanyl-nucleotide exchange factor activity GO:0005575 C cellular_component GO:0005622 C intracellular anatomical structure GO:0007264 P small GTPase mediated signal transduction GO:0007265 P Ras protein signal transduction GO:0007275 P multicellular organism development GO:0007525 P somatic muscle development GO:0016203 P muscle attachment GO:0017034 F guanyl-nucleotide exchange factor activity GO:0017124 F SH3 domain binding GO:0043087 P regulation of GTPase activity GO:0043547 P positive regulation of GTPase activity GO:0045214 P sarcomere organization
7	O_SariMSG10006_3prime_partial:A_SariMSG_c23636_g1_i1 486bp		armadillo_segment_polarity_protein_isoform_X3_[Helicoverpa_armigera]	GO:0004871 F obsolete signal transducer activity GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0005912 C adherens junction GO:0007155 P cell adhesion GO:0007275 P multicellular organism development GO:0007367 P segment polarity determination GO:0016020 C membrane GO:0016055 P Wnt signaling pathway GO:0016342 C catenin complex GO:0019903 F protein phosphatase binding GO:0030054 C cell junction GO:0034333 P adherens junction assembly GO:0045294 F alpha-catenin binding GO:0045296 F cadherin binding
8	O_SariMSG10007_5prime_partial:A_SariMSG_c23636_g1_i1 112bp
9	O_SariMSG10008_internal:A_SariMSG_c23636_g1_i2 389bp		armadillo_segment_polarity_protein_isoform_X3_[Helicoverpa_armigera]	GO:0004871 F obsolete signal transducer activity GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0005912 C adherens junction GO:0007155 P cell adhesion GO:0007275 P multicellular organism development GO:0007367 P segment polarity determination GO:0008134 F transcription factor binding GO:0014017 P neuroblast fate commitment GO:0016020 C membrane GO:0016055 P Wnt signaling pathway GO:0030054 C cell junction GO:0034333 P adherens junction assembly GO:0045296 F cadherin binding
10	O_SariMSG10009_5prime_partial:A_SariMSG_c23636_g1_i2 112bp
11	O_SariMSG1000_5prime_partial:A_SariMSG_c4975_g1_i1 100bp
12	O_SariMSG10010_3prime_partial:A_SariMSG_c23637_g1_i1 120bp		PREDICTED:_neurotactin_[Plutella_xylostella]	GO:0004872 F signaling receptor activity GO:0005615 C extracellular space GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0005887 C integral component of plasma membrane GO:0007155 P cell adhesion GO:0007158 P neuron cell-cell adhesion GO:0007409 P axonogenesis GO:0007411 P axon guidance GO:0007413 P axonal fasciculation GO:0007416 P synapse assembly GO:0007417 P central nervous system development GO:0009986 C cell surface GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016323 C basolateral plasma membrane GO:0042043 F neurexin family protein binding GO:0045202 C synapse GO:0050804 P modulation of chemical synaptic transmission GO:0052689 F carboxylic ester hydrolase activity
13	O_SariMSG10011_3prime_partial:A_SariMSG_c23638_g1_i1 158bp		sideroflexin-1_[Bombyx_mori]	GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0006810 P transport GO:0006811 P ion transport GO:0006826 P iron ion transport GO:0015075 F ion transmembrane transporter activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0030218 P erythrocyte differentiation GO:0031966 C mitochondrial membrane GO:0034220 P ion transmembrane transport GO:0055072 P iron ion homeostasis GO:0055085 P transmembrane transport
14	O_SariMSG10012_internal:A_SariMSG_c23640_g1_i1 234bp		transmembrane_protein_185A_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process GO:0016020 C membrane GO:0016021 C integral component of membrane
15	O_SariMSG10013_internal:A_SariMSG_c23641_g1_i1 119bp		putative_RNA-directed_DNA_polymerase_from_transposon_X-element_[Papilio_xuthus]	GO:0003964 F RNA-directed DNA polymerase activity GO:0005575 C cellular_component GO:0006278 P RNA-dependent DNA biosynthetic process GO:0006313 P transposition, DNA-mediated GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity
16	O_SariMSG10014_internal:A_SariMSG_c23644_g1_i1 230bp		PREDICTED:_uncharacterized_protein_LOC106102831_[Papilio_polytes]	GO:0004175 F endopeptidase activity GO:0005575 C cellular_component GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment GO:0006508 P proteolysis GO:0006810 P transport GO:0016192 P vesicle-mediated transport
17	O_SariMSG10015_complete:A_SariMSG_c23645_g1_i2 304bp		deoxyhypusine_hydroxylase/monooxygenase_[Bombyx_mori]	GO:0004497 F monooxygenase activity GO:0005575 C cellular_component GO:0008612 P peptidyl-lysine modification to peptidyl-hypusine GO:0016491 F oxidoreductase activity GO:0019135 F deoxyhypusine monooxygenase activity GO:0046872 F metal ion binding GO:0055114 P obsolete oxidation-reduction process
18	O_SariMSG10016_complete:A_SariMSG_c23646_g1_i1 134bp
19	O_SariMSG10017_complete:A_SariMSG_c23646_g1_i2 134bp
20	O_SariMSG10018_5prime_partial:A_SariMSG_c23646_g1_i2 114bp
21	O_SariMSG10019_5prime_partial:A_SariMSG_c23647_g1_i1 178bp		Microsomal_triglyceride_transfer_protein_large_subunit_[Papilio_xuthus]
22	O_SariMSG1001_internal:A_SariMSG_c4977_g1_i1 131bp		GTP_binding_protein_[Operophtera_brumata]
23	O_SariMSG10020_5prime_partial:A_SariMSG_c23647_g1_i1 110bp
24	O_SariMSG10021_5prime_partial:A_SariMSG_c23647_g1_i1 107bp
25	O_SariMSG10022_5prime_partial:A_SariMSG_c23647_g1_i2 269bp		Microsomal_triglyceride_transfer_protein_large_subunit_[Papilio_xuthus]	GO:0005319 F lipid transporter activity GO:0005515 F protein binding GO:0005548 F phospholipid transporter activity GO:0005783 C endoplasmic reticulum GO:0005791 C rough endoplasmic reticulum GO:0005794 C Golgi apparatus GO:0006497 P protein lipidation GO:0006629 P lipid metabolic process GO:0006641 P triglyceride metabolic process GO:0006810 P transport GO:0006869 P lipid transport GO:0007623 P circadian rhythm GO:0008202 P steroid metabolic process GO:0008203 P cholesterol metabolic process GO:0008289 F lipid binding GO:0015914 P phospholipid transport GO:0016323 C basolateral plasma membrane GO:0031526 C brush border membrane GO:0031528 C microvillus membrane GO:0031988 C vesicle GO:0034185 F apolipoprotein binding GO:0034197 P triglyceride transport GO:0034377 P plasma lipoprotein particle assembly GO:0042157 P lipoprotein metabolic process GO:0042632 P cholesterol homeostasis GO:0042953 P lipoprotein transport GO:0043235 C receptor complex GO:0046982 F protein heterodimerization activity GO:0051592 P response to calcium ion
26	O_SariMSG10023_5prime_partial:A_SariMSG_c23647_g1_i2 107bp
27	O_SariMSG10024_5prime_partial:A_SariMSG_c23647_g1_i3 146bp		Microsomal_triglyceride_transfer_protein_large_subunit_[Papilio_xuthus]
28	O_SariMSG10025_5prime_partial:A_SariMSG_c23647_g1_i3 107bp
29	O_SariMSG10026_5prime_partial:A_SariMSG_c23648_g1_i1 143bp
30	O_SariMSG10027_5prime_partial:A_SariMSG_c23648_g1_i1 141bp		PREDICTED:_dual_serine/threonine_and_tyrosine_protein_kinase-like_[Amyelois_transitella]	GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0004712 F protein serine/threonine/tyrosine kinase activity GO:0004713 F protein tyrosine kinase activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0005886 C plasma membrane GO:0006468 P protein phosphorylation GO:0016020 C membrane GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016323 C basolateral plasma membrane GO:0016324 C apical plasma membrane GO:0016740 F transferase activity GO:0018108 P peptidyl-tyrosine phosphorylation GO:0030054 C cell junction GO:0033674 P positive regulation of kinase activity GO:0035556 P intracellular signal transduction GO:0044344 P cellular response to fibroblast growth factor stimulus GO:0045743 P positive regulation of fibroblast growth factor receptor signaling pathway GO:0070374 P positive regulation of ERK1 and ERK2 cascade