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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4231 O_SariASG13809_complete:A_SariASG_c37594_g1_i4
711bp
PREDICTED:_RNA-binding_protein_5-A-like_isoform_X2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
4232 O_SariASG1380_3prime_partial:A_SariASG_c12792_g1_i1
139bp
unnamed_protein_product_[Mus_musculus]
GO:0003231 P cardiac ventricle development
GO:0003677 F DNA binding
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006810 P transport
GO:0010664 P negative regulation of striated muscle cell apoptotic process
GO:0015031 P protein transport
GO:0017025 F TBP-class protein binding
GO:0043403 P skeletal muscle tissue regeneration
GO:0048633 P positive regulation of skeletal muscle tissue growth
GO:0048742 P regulation of skeletal muscle fiber development
GO:0051451 P myoblast migration
GO:0061384 P heart trabecula morphogenesis
GO:0070062 C extracellular exosome
GO:1901227 P negative regulation of transcription from RNA polymerase II promoter involved in heart development
GO:1901228 P positive regulation of transcription from RNA polymerase II promoter involved in heart development
GO:2000138 P positive regulation of cell proliferation involved in heart morphogenesis
4233 O_SariASG13810_complete:A_SariASG_c37594_g1_i4
103bp
4234 O_SariASG13811_complete:A_SariASG_c37594_g1_i5
711bp
PREDICTED:_RNA-binding_protein_5-A-like_isoform_X2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
4235 O_SariASG13812_internal:A_SariASG_c37595_g1_i1
251bp
intraflagellar_transport_protein_122_homolog_[Helicoverpa_armigera]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0007275 P multicellular organism development
GO:0030030 P cell projection organization
GO:0030991 C intraciliary transport particle A
GO:0035721 P intraciliary retrograde transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0061512 P protein localization to cilium
GO:0072372 C cilium
4236 O_SariASG13813_internal:A_SariASG_c37595_g1_i2
112bp
intraflagellar_transport_protein_122_homolog_[Helicoverpa_armigera]
GO:0001843 P neural tube closure
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0007227 P signal transduction downstream of smoothened
GO:0007275 P multicellular organism development
GO:0009953 P dorsal/ventral pattern formation
GO:0010172 P embryonic body morphogenesis
GO:0016020 C membrane
GO:0021914 P negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning
GO:0030030 P cell projection organization
GO:0030991 C intraciliary transport particle A
GO:0032391 C photoreceptor connecting cilium
GO:0035050 P embryonic heart tube development
GO:0035115 P embryonic forelimb morphogenesis
GO:0035720 P intraciliary anterograde transport
GO:0035721 P intraciliary retrograde transport
GO:0035735 P intraciliary transport involved in cilium assembly
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042733 P embryonic digit morphogenesis
GO:0042995 C cell projection
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0048593 P camera-type eye morphogenesis
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0060173 P limb development
GO:0060271 P cilium assembly
GO:0060830 P ciliary receptor clustering involved in smoothened signaling pathway
GO:0060831 P smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:0060971 P embryonic heart tube left/right pattern formation
GO:0061512 P protein localization to cilium
GO:0072372 C cilium
GO:0072594 P establishment of protein localization to organelle
GO:0097542 C ciliary tip
GO:0097546 C ciliary base
4237 O_SariASG13814_internal:A_SariASG_c37602_g1_i1
106bp
PREDICTED:_S-phase_kinase-associated_protein_2-like_[Papilio_polytes]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008283 P cell population proliferation
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0033148 P positive regulation of intracellular estrogen receptor signaling pathway
GO:0042802 F identical protein binding
GO:0042981 P regulation of apoptotic process
GO:0048661 P positive regulation of smooth muscle cell proliferation
GO:0051726 P regulation of cell cycle
GO:0061630 F ubiquitin protein ligase activity
GO:0071460 P cellular response to cell-matrix adhesion
GO:1902916 P positive regulation of protein polyubiquitination
4238 O_SariASG13815_5prime_partial:A_SariASG_c37602_g2_i2
162bp
S-phase_kinase-associated_protein_2_[Papilio_xuthus]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000209 P protein polyubiquitination
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0033148 P positive regulation of intracellular estrogen receptor signaling pathway
GO:0042802 F identical protein binding
GO:0042981 P regulation of apoptotic process
GO:0048661 P positive regulation of smooth muscle cell proliferation
GO:0051726 P regulation of cell cycle
GO:0061630 F ubiquitin protein ligase activity
GO:0071460 P cellular response to cell-matrix adhesion
GO:1902916 P positive regulation of protein polyubiquitination
4239 O_SariASG13816_5prime_partial:A_SariASG_c37602_g2_i2
112bp
4240 O_SariASG13817_internal:A_SariASG_c37604_g1_i1
347bp
importin-13_[Bombyx_mori]
4241 O_SariASG13818_5prime_partial:A_SariASG_c37604_g1_i1
111bp
4242 O_SariASG13819_internal:A_SariASG_c37605_g1_i2
120bp
PREDICTED:_uncharacterized_protein_LOC106125042_[Papilio_xuthus]
4243 O_SariASG1381_5prime_partial:A_SariASG_c12792_g1_i1
130bp
Nascent_polypeptide-associated_complex_subunit_alpha_[Fukomys_damarensis]
4244 O_SariASG13820_5prime_partial:A_SariASG_c37607_g1_i1
390bp
PREDICTED:_putative_aldehyde_dehydrogenase_family_7_member_A1_homolog_[Amyelois_transitella]
GO:0004029 F aldehyde dehydrogenase (NAD+) activity
GO:0005575 C cellular_component
GO:0006081 P cellular aldehyde metabolic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0055114 P obsolete oxidation-reduction process
4245 O_SariASG13821_5prime_partial:A_SariASG_c37607_g1_i2
401bp
PREDICTED:_putative_aldehyde_dehydrogenase_family_7_member_A1_homolog_[Amyelois_transitella]
GO:0004029 F aldehyde dehydrogenase (NAD+) activity
GO:0005575 C cellular_component
GO:0006081 P cellular aldehyde metabolic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0055114 P obsolete oxidation-reduction process
4246 O_SariASG13822_complete:A_SariASG_c37608_g1_i1
947bp
ribosome-binding_protein_1_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005887 C integral component of plasma membrane
GO:0007018 P microtubule-based movement
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019894 F kinesin binding
GO:0044822 F RNA binding
4247 O_SariASG13823_complete:A_SariASG_c37608_g1_i1
102bp
4248 O_SariASG13824_complete:A_SariASG_c37608_g1_i2
851bp
ribosome-binding_protein_1_isoform_X3_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007018 P microtubule-based movement
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019894 F kinesin binding
4249 O_SariASG13825_complete:A_SariASG_c37608_g1_i2
102bp
4250 O_SariASG13826_complete:A_SariASG_c37608_g1_i3
851bp
ribosome-binding_protein_1_isoform_X3_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007018 P microtubule-based movement
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019894 F kinesin binding
4251 O_SariASG13827_complete:A_SariASG_c37608_g1_i3
102bp
4252 O_SariASG13828_complete:A_SariASG_c37608_g1_i4
886bp
ribosome-binding_protein_1_isoform_X3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005887 C integral component of plasma membrane
GO:0007018 P microtubule-based movement
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019894 F kinesin binding
GO:0044822 F RNA binding
4253 O_SariASG13829_complete:A_SariASG_c37608_g1_i4
102bp
4254 O_SariASG1382_5prime_partial:A_SariASG_c12803_g1_i1
365bp
DNA-directed_RNA_polymerases_I_and_III_subunit_RPAC1_[Papilio_machaon]
GO:0000183 P rDNA heterochromatin assembly
GO:0001054 F RNA polymerase I activity
GO:0001056 F RNA polymerase III activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005666 C RNA polymerase III complex
GO:0005736 C RNA polymerase I complex
GO:0006351 P transcription, DNA-templated
GO:0006361 P transcription initiation from RNA polymerase I promoter
GO:0006383 P transcription by RNA polymerase III
GO:0008150 P biological_process
GO:0034587 P piRNA metabolic process
GO:0046983 F protein dimerization activity
4255 O_SariASG13830_5prime_partial:A_SariASG_c37610_g1_i1
489bp
PREDICTED:_actin_cytoskeleton-regulatory_complex_protein_PAN1-like_isoform_X3_[Papilio_xuthus]
4256 O_SariASG13831_complete:A_SariASG_c37610_g1_i1
127bp
4257 O_SariASG13832_5prime_partial:A_SariASG_c37610_g1_i2
458bp
PREDICTED:_uncharacterized_protein_LOC106711079_[Papilio_machaon]
4258 O_SariASG13833_complete:A_SariASG_c37610_g1_i2
127bp
4259 O_SariASG13834_5prime_partial:A_SariASG_c37610_g1_i3
450bp
PREDICTED:_uncharacterized_protein_LOC106711079_[Papilio_machaon]
4260 O_SariASG13835_complete:A_SariASG_c37610_g1_i3
127bp
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