SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/33287
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4201 O_SariASG13782_complete:A_SariASG_c37584_g1_i1
102bp
4202 O_SariASG13783_5prime_partial:A_SariASG_c37584_g1_i3
619bp
E3_ubiquitin-protein_ligase_NEDD4_isoform_X6_[Helicoverpa_armigera]
GO:0002092 P positive regulation of receptor internalization
GO:0004842 F ubiquitin-protein transferase activity
GO:0005112 F Notch binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0007528 P neuromuscular junction development
GO:0016199 P axon midline choice point recognition
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0017022 F myosin binding
GO:0019904 F protein domain specific binding
GO:0031623 P receptor internalization
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0045746 P negative regulation of Notch signaling pathway
GO:0045807 P positive regulation of endocytosis
GO:0051965 P positive regulation of synapse assembly
GO:0061630 F ubiquitin protein ligase activity
4203 O_SariASG13784_complete:A_SariASG_c37584_g1_i3
195bp
4204 O_SariASG13785_complete:A_SariASG_c37584_g1_i3
102bp
4205 O_SariASG13786_3prime_partial:A_SariASG_c37585_g1_i2
302bp
hemolymph_proteinase_6_[Antheraea_pernyi]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007311 P maternal specification of dorsal/ventral axis, oocyte, germ-line encoded
GO:0008063 P Toll signaling pathway
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009950 P dorsal/ventral axis specification
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
4206 O_SariASG13787_internal:A_SariASG_c37587_g1_i1
225bp
DNA-directed_RNA_polymerase_II_subunit_RPB1_[Bombyx_mori]
4207 O_SariASG13788_complete:A_SariASG_c37587_g1_i1
138bp
4208 O_SariASG13789_5prime_partial:A_SariASG_c37587_g1_i1
108bp
4209 O_SariASG1378_internal:A_SariASG_c12765_g1_i1
107bp
4210 O_SariASG13790_internal:A_SariASG_c37587_g1_i3
241bp
DNA-directed_RNA_polymerase_II_subunit_RPB1_[Bombyx_mori]
4211 O_SariASG13791_complete:A_SariASG_c37587_g1_i3
154bp
4212 O_SariASG13792_5prime_partial:A_SariASG_c37587_g1_i3
124bp
4213 O_SariASG13793_complete:A_SariASG_c37588_g1_i1
504bp
PREDICTED:_uncharacterized_protein_LOC106102871_[Papilio_polytes]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
4214 O_SariASG13794_complete:A_SariASG_c37588_g1_i2
237bp
uncharacterized_protein_LOC110380751_[Helicoverpa_armigera]
4215 O_SariASG13795_5prime_partial:A_SariASG_c37590_g1_i1
376bp
uncharacterized_protein_LOC110374928_[Helicoverpa_armigera]
4216 O_SariASG13796_complete:A_SariASG_c37590_g1_i1
138bp
4217 O_SariASG13797_5prime_partial:A_SariASG_c37590_g1_i2
711bp
uncharacterized_protein_LOC101742101_[Bombyx_mori]
4218 O_SariASG13798_complete:A_SariASG_c37590_g1_i2
164bp
4219 O_SariASG13799_complete:A_SariASG_c37590_g1_i2
147bp
4220 O_SariASG1379_internal:A_SariASG_c12765_g1_i1
107bp
MIT_domain-containing_protein_1_[Papilio_xuthus]
GO:0000281 P mitotic cytokinesis
GO:0000920 P septum digestion after cytokinesis
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0019904 F protein domain specific binding
GO:0030496 C midbody
GO:0031902 C late endosome membrane
GO:0032091 P negative regulation of protein binding
GO:0035091 F phosphatidylinositol binding
GO:0039702 P viral budding via host ESCRT complex
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0051301 P cell division
GO:0070062 C extracellular exosome
GO:0071985 P multivesicular body sorting pathway
4221 O_SariASG137_5prime_partial:A_SariASG_c954_g1_i1
341bp
Protein_sidekick_[Papilio_xuthus]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042675 P compound eye cone cell differentiation
GO:0046533 P negative regulation of photoreceptor cell differentiation
GO:0050931 P pigment cell differentiation
GO:0098595 C perivitelline space
4222 O_SariASG13800_complete:A_SariASG_c37590_g1_i2
128bp
4223 O_SariASG13801_complete:A_SariASG_c37591_g1_i1
324bp
transforming_acidic_coiled-coil-containing_protein_3-like_[Helicoverpa_armigera]
GO:0000226 P microtubule cytoskeleton organization
GO:0001666 P response to hypoxia
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0008283 P cell population proliferation
GO:0019904 F protein domain specific binding
GO:0021987 P cerebral cortex development
GO:0022008 P neurogenesis
GO:0022027 P interkinetic nuclear migration
GO:0030097 P hemopoiesis
GO:0030953 P astral microtubule organization
GO:0032886 P regulation of microtubule-based process
GO:0042994 P cytoplasmic sequestering of transcription factor
GO:0051726 P regulation of cell cycle
4224 O_SariASG13802_internal:A_SariASG_c37592_g1_i1
159bp
Replicase_large_subunit_[Operophtera_brumata]
4225 O_SariASG13803_3prime_partial:A_SariASG_c37592_g1_i2
100bp
4226 O_SariASG13804_complete:A_SariASG_c37594_g1_i1
711bp
PREDICTED:_RNA-binding_protein_5-A-like_isoform_X2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
4227 O_SariASG13805_5prime_partial:A_SariASG_c37594_g1_i1
125bp
4228 O_SariASG13806_complete:A_SariASG_c37594_g1_i2
711bp
PREDICTED:_RNA-binding_protein_5-A-like_isoform_X2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
4229 O_SariASG13807_complete:A_SariASG_c37594_g1_i2
103bp
4230 O_SariASG13808_complete:A_SariASG_c37594_g1_i3
103bp
previous next from show/33287

- SilkBase 1999-2023 -