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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
511 O_BomaMSG10460_complete:A_BomaMSG_c21435_g1_i2
161bp
512 O_BomaMSG10461_3prime_partial:A_BomaMSG_c21437_g1_i1
189bp
putative_methyltransferase_C9orf114_[Bombyx_mori]
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0005575 C cellular_component
GO:0005694 C chromosome
GO:0007049 P cell cycle
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0044822 F RNA binding
GO:0051301 P cell division
513 O_BomaMSG10462_complete:A_BomaMSG_c21437_g1_i1
114bp
514 O_BomaMSG10463_complete:A_BomaMSG_c21438_g1_i1
824bp
oxygen_resistance_gene_1_isoform_X9_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030374 F nuclear receptor coactivator activity
GO:0035257 F nuclear receptor binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
515 O_BomaMSG10464_complete:A_BomaMSG_c21438_g1_i1
176bp
516 O_BomaMSG10465_complete:A_BomaMSG_c21438_g1_i1
104bp
517 O_BomaMSG10466_5prime_partial:A_BomaMSG_c21438_g1_i2
866bp
oxygen_resistance_gene_1_isoform_X3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030374 F nuclear receptor coactivator activity
GO:0035257 F nuclear receptor binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
518 O_BomaMSG10467_complete:A_BomaMSG_c21438_g1_i2
153bp
519 O_BomaMSG10468_complete:A_BomaMSG_c21438_g1_i2
104bp
520 O_BomaMSG10469_3prime_partial:A_BomaMSG_c21442_g1_i2
266bp
serine/threonine-protein_kinase_TBK1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004704 F NF-kappaB-inducing kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007252 P I-kappaB phosphorylation
GO:0008384 F IkappaB kinase activity
GO:0008630 P intrinsic apoptotic signaling pathway in response to DNA damage
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016605 C PML body
GO:0016740 F transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0031966 C mitochondrial membrane
GO:0034340 P response to type I interferon
GO:0035456 P response to interferon-beta
GO:0036435 F K48-linked polyubiquitin modification-dependent protein binding
GO:0038061 P NIK/NF-kappaB signaling
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0051260 P protein homooligomerization
GO:0098586 P cellular response to virus
521 O_BomaMSG1046_complete:A_BomaMSG_c4543_g1_i1
126bp
hypothetical_protein_EGK_04263,_partial_[Macaca_mulatta]
522 O_BomaMSG10470_3prime_partial:A_BomaMSG_c21444_g1_i1
412bp
uncharacterized_protein_LOC101741349_isoform_X4_[Bombyx_mori]
523 O_BomaMSG10471_5prime_partial:A_BomaMSG_c21445_g1_i1
377bp
SWI/SNF-related_matrix-associated_actin-dependent_regulator_of_chromatin_subfamily_B_member_1-A_isoform_X1_[Bombyx_mori]
GO:0000228 C nuclear chromosome
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006337 P nucleosome disassembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008285 P negative regulation of cell population proliferation
GO:0030154 P cell differentiation
GO:0043044 P chromatin remodeling
GO:0090544 C SWI/SNF superfamily-type complex
524 O_BomaMSG10472_5prime_partial:A_BomaMSG_c21446_g1_i1
161bp
UPF0669_protein_C6orf120_homolog_isoform_X3_[Bombyx_mori]
GO:0005576 C extracellular region
525 O_BomaMSG10473_internal:A_BomaMSG_c21446_g1_i2
194bp
UPF0669_protein_C6orf120_homolog_isoform_X2_[Bombyx_mori]
GO:0005576 C extracellular region
526 O_BomaMSG10474_3prime_partial:A_BomaMSG_c21449_g1_i1
159bp
X-linked_retinitis_pigmentosa_GTPase_regulator_homolog_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0008150 P biological_process
527 O_BomaMSG10475_3prime_partial:A_BomaMSG_c21449_g1_i3
107bp
RCC1_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0000079 P regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000209 P protein polyubiquitination
GO:0002376 P immune system process
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016874 F ligase activity
GO:0032020 P ISG15-protein conjugation
GO:0032480 P negative regulation of type I interferon production
GO:0042296 F ISG15 transferase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0045087 P innate immune response
GO:0048471 C perinuclear region of cytoplasm
GO:0050688 P regulation of defense response to virus
GO:0051607 P defense response to virus
528 O_BomaMSG10476_3prime_partial:A_BomaMSG_c21452_g1_i1
238bp
syntaxin-7_[Bombyx_mori]
GO:0000149 F SNARE binding
GO:0001772 C immunological synapse
GO:0001916 P positive regulation of T cell mediated cytotoxicity
GO:0005484 F SNAP receptor activity
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005886 C plasma membrane
GO:0006886 P intracellular protein transport
GO:0006906 P vesicle fusion
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0019869 F chloride channel inhibitor activity
GO:0019905 F syntaxin binding
GO:0030139 C endocytic vesicle
GO:0031201 C SNARE complex
GO:0031901 C early endosome membrane
GO:0031982 C vesicle
GO:0042582 C azurophil granule
GO:0043231 C intracellular membrane-bounded organelle
GO:0048278 P vesicle docking
GO:0048471 C perinuclear region of cytoplasm
GO:0051640 P organelle localization
GO:0055037 C recycling endosome
GO:0070062 C extracellular exosome
GO:0070820 C tertiary granule
GO:0070925 P organelle assembly
GO:1902685 P positive regulation of receptor localization to synapse
GO:1903076 P regulation of protein localization to plasma membrane
529 O_BomaMSG10477_5prime_partial:A_BomaMSG_c21454_g1_i2
157bp
ESF1_homolog_[Bombyx_mori]
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0044822 F RNA binding
530 O_BomaMSG10478_5prime_partial:A_BomaMSG_c21454_g1_i3
207bp
ESF1_homolog_[Bombyx_mori]
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0044822 F RNA binding
531 O_BomaMSG10479_internal:A_BomaMSG_c21456_g1_i1
274bp
serine/threonine-protein_kinase_PAK_3_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000278 P mitotic cell cycle
GO:0001726 C ruffle
GO:0001934 P positive regulation of protein phosphorylation
GO:0003824 F catalytic activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0005518 F collagen binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006468 P protein phosphorylation
GO:0006887 P exocytosis
GO:0006915 P apoptotic process
GO:0007409 P axonogenesis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0023014 P signal transduction
GO:0030036 P actin cytoskeleton organization
GO:0030054 C cell junction
GO:0030335 P positive regulation of cell migration
GO:0031532 P actin cytoskeleton reorganization
GO:0032587 C ruffle membrane
GO:0033138 P positive regulation of peptidyl-serine phosphorylation
GO:0033148 P positive regulation of intracellular estrogen receptor signaling pathway
GO:0042060 P wound healing
GO:0042995 C cell projection
GO:0043234 C protein-containing complex
GO:0043507 P positive regulation of JUN kinase activity
GO:0046777 P protein autophosphorylation
GO:0048754 P branching morphogenesis of an epithelial tube
GO:0051496 P positive regulation of stress fiber assembly
GO:0060244 P negative regulation of cell proliferation involved in contact inhibition
GO:0071437 C obsolete invadopodium
532 O_BomaMSG1047_internal:A_BomaMSG_c4544_g1_i1
106bp
uncharacterized_protein_LOC101740358_isoform_X1_[Bombyx_mori]
GO:0000904 P cell morphogenesis involved in differentiation
GO:0001764 P neuron migration
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007275 P multicellular organism development
GO:0010842 P retina layer formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030425 C dendrite
GO:2000171 P negative regulation of dendrite development
533 O_BomaMSG10480_internal:A_BomaMSG_c21456_g1_i2
298bp
serine/threonine-protein_kinase_PAK_3_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000278 P mitotic cell cycle
GO:0002119 P nematode larval development
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005882 C intermediate filament
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0010172 P embryonic body morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0023014 P signal transduction
GO:0030036 P actin cytoskeleton organization
GO:0030056 C hemidesmosome
GO:0030424 C axon
GO:0031581 P hemidesmosome assembly
GO:0035262 P gonad morphogenesis
GO:0040039 P inductive cell migration
GO:0042995 C cell projection
GO:0043025 C neuronal cell body
GO:0043204 C perikaryon
GO:0048598 P embryonic morphogenesis
534 O_BomaMSG10481_complete:A_BomaMSG_c21457_g1_i1
420bp
uncharacterized_protein_LOC110381188_[Helicoverpa_armigera]
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
535 O_BomaMSG10482_5prime_partial:A_BomaMSG_c21457_g1_i1
341bp
m7GpppX_diphosphatase_[Bombyx_mori]
GO:0000290 P deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000340 F RNA 7-methylguanosine cap binding
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0036245 P cellular response to menadione
GO:0043069 P negative regulation of programmed cell death
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0050072 F m7G(5')pppN diphosphatase activity
536 O_BomaMSG10483_complete:A_BomaMSG_c21457_g1_i2
420bp
uncharacterized_protein_LOC110381188_[Helicoverpa_armigera]
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
537 O_BomaMSG10484_complete:A_BomaMSG_c21459_g1_i1
432bp
vacuolar_protein_sorting-associated_protein_26B-like_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007224 P smoothened signaling pathway
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0019233 P sensory perception of pain
GO:0030111 P regulation of Wnt signaling pathway
GO:0030510 P regulation of BMP signaling pathway
GO:0030904 C retromer complex
GO:0030906 C retromer, cargo-selective complex
GO:0042147 P retrograde transport, endosome to Golgi
538 O_BomaMSG10485_complete:A_BomaMSG_c21460_g1_i1
161bp
ADP-ribosylation_factor-like_protein_6-interacting_protein_4_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
539 O_BomaMSG10486_complete:A_BomaMSG_c21461_g1_i1
443bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
540 O_BomaMSG10487_5prime_partial:A_BomaMSG_c21461_g1_i1
105bp
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