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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3871 O_BomaMSG13485_internal:A_BomaMSG_c23020_g1_i4
273bp
guanine_nucleotide-binding_protein-like_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002456 P T cell mediated immunity
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005525 F GTP binding
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0006974 P cellular response to DNA damage stimulus
GO:0007165 P signal transduction
GO:0042254 P ribosome biogenesis
3872 O_BomaMSG13486_complete:A_BomaMSG_c23020_g1_i4
121bp
3873 O_BomaMSG13487_5prime_partial:A_BomaMSG_c23020_g1_i4
112bp
3874 O_BomaMSG13488_internal:A_BomaMSG_c23022_g1_i1
203bp
transcription_factor_kayak,_isoforms_D/sro_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0009790 P embryo development
GO:0043565 F sequence-specific DNA binding
3875 O_BomaMSG13489_complete:A_BomaMSG_c23022_g1_i1
108bp
3876 O_BomaMSG1348_internal:A_BomaMSG_c5565_g1_i1
140bp
active_breakpoint_cluster_region-related_protein_isoform_X1_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005622 C intracellular anatomical structure
GO:0007165 P signal transduction
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
3877 O_BomaMSG13490_3prime_partial:A_BomaMSG_c23022_g1_i2
365bp
transcription_factor_kayak,_isoforms_D/sro_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0043565 F sequence-specific DNA binding
3878 O_BomaMSG13491_complete:A_BomaMSG_c23022_g1_i2
108bp
3879 O_BomaMSG13492_3prime_partial:A_BomaMSG_c23022_g1_i3
357bp
transcription_factor_kayak,_isoforms_D/sro_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0043565 F sequence-specific DNA binding
3880 O_BomaMSG13493_complete:A_BomaMSG_c23022_g1_i3
108bp
3881 O_BomaMSG13494_3prime_partial:A_BomaMSG_c23023_g1_i1
112bp
la-related_protein_1_[Bombyx_mori]
3882 O_BomaMSG13495_3prime_partial:A_BomaMSG_c23024_g1_i1
373bp
serine/threonine-protein_kinase_S6KL_isoform_X1_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
3883 O_BomaMSG13496_complete:A_BomaMSG_c23024_g1_i3
305bp
serine/threonine-protein_kinase_S6KL_isoform_X2_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
3884 O_BomaMSG13497_complete:A_BomaMSG_c23025_g1_i1
235bp
BWK-1-like_protein_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0030054 C cell junction
3885 O_BomaMSG13498_3prime_partial:A_BomaMSG_c23026_g1_i1
424bp
TATA_element_modulatory_factor_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001675 P acrosome assembly
GO:0001819 P positive regulation of cytokine production
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007286 P spermatid development
GO:0007289 P spermatid nucleus differentiation
GO:0008584 P male gonad development
GO:0010629 P negative regulation of gene expression
GO:0016020 C membrane
GO:0030317 P flagellated sperm motility
GO:0032275 P luteinizing hormone secretion
GO:0033327 P Leydig cell differentiation
GO:0042742 P defense response to bacterium
GO:0043066 P negative regulation of apoptotic process
GO:0061136 P regulation of proteasomal protein catabolic process
GO:0071407 P cellular response to organic cyclic compound
GO:2000845 P positive regulation of testosterone secretion
3886 O_BomaMSG13499_internal:A_BomaMSG_c23026_g1_i2
117bp
TATA_element_modulatory_factor_isoform_X2_[Bombyx_mori]
3887 O_BomaMSG1349_internal:A_BomaMSG_c5584_g1_i1
219bp
uncharacterized_protein_LOC101746464_isoform_X3_[Bombyx_mori]
GO:0006810 P transport
GO:0015031 P protein transport
3888 O_BomaMSG134_internal:A_BomaMSG_c627_g1_i1
106bp
3889 O_BomaMSG13500_3prime_partial:A_BomaMSG_c23027_g1_i1
566bp
nucleosomal_histone_kinase_1_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0000166 F nucleotide binding
GO:0000785 C chromatin
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007126 P meiotic cell cycle
GO:0007130 P synaptonemal complex assembly
GO:0007143 P female meiotic nuclear division
GO:0008360 P regulation of cell shape
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016568 P chromatin organization
GO:0016572 P histone phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0018107 P peptidyl-threonine phosphorylation
GO:0022008 P neurogenesis
GO:0030717 P oocyte karyosome formation
GO:0035184 F histone threonine kinase activity
GO:0035405 P histone-threonine phosphorylation
GO:0036098 P male germ-line stem cell population maintenance
GO:0036099 P female germ-line stem cell population maintenance
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0097150 P neuronal stem cell population maintenance
GO:2001020 P regulation of response to DNA damage stimulus
3890 O_BomaMSG13501_3prime_partial:A_BomaMSG_c23027_g1_i2
566bp
nucleosomal_histone_kinase_1_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0000166 F nucleotide binding
GO:0000785 C chromatin
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007126 P meiotic cell cycle
GO:0007130 P synaptonemal complex assembly
GO:0007143 P female meiotic nuclear division
GO:0008360 P regulation of cell shape
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016568 P chromatin organization
GO:0016572 P histone phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0018107 P peptidyl-threonine phosphorylation
GO:0022008 P neurogenesis
GO:0030717 P oocyte karyosome formation
GO:0035184 F histone threonine kinase activity
GO:0035405 P histone-threonine phosphorylation
GO:0036098 P male germ-line stem cell population maintenance
GO:0036099 P female germ-line stem cell population maintenance
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0097150 P neuronal stem cell population maintenance
GO:2001020 P regulation of response to DNA damage stimulus
3891 O_BomaMSG13502_3prime_partial:A_BomaMSG_c23028_g1_i2
241bp
uncharacterized_protein_LOC110370764_[Helicoverpa_armigera]
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006915 P apoptotic process
GO:1902108 P regulation of mitochondrial membrane permeability involved in apoptotic process
3892 O_BomaMSG13503_internal:A_BomaMSG_c23030_g1_i1
106bp
uncharacterized_protein_LOC101741203_[Bombyx_mori]
3893 O_BomaMSG13504_complete:A_BomaMSG_c23030_g1_i2
218bp
uncharacterized_protein_LOC101741203_[Bombyx_mori]
3894 O_BomaMSG13505_complete:A_BomaMSG_c23032_g1_i1
287bp
serine/threonine-protein_phosphatase_4_catalytic_subunit_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006470 P protein dephosphorylation
GO:0008152 P metabolic process
GO:0010569 P regulation of double-strand break repair via homologous recombination
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
3895 O_BomaMSG13506_internal:A_BomaMSG_c23034_g1_i1
212bp
dynein_heavy_chain,_cytoplasmic_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000776 C kinetochore
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005868 C cytoplasmic dynein complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005938 C cell cortex
GO:0006886 P intracellular protein transport
GO:0007018 P microtubule-based movement
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007098 P centrosome cycle
GO:0007279 P pole cell formation
GO:0007282 P cystoblast division
GO:0007294 P germarium-derived oocyte fate determination
GO:0007298 P border follicle cell migration
GO:0007301 P female germline ring canal formation
GO:0007312 P oocyte nucleus migration involved in oocyte dorsal/ventral axis specification
GO:0007349 P cellularization
GO:0007405 P neuroblast proliferation
GO:0008088 P axo-dendritic transport
GO:0008090 P retrograde axonal transport
GO:0008298 P intracellular mRNA localization
GO:0008569 F minus-end-directed microtubule motor activity
GO:0016319 P mushroom body development
GO:0016887 F ATP hydrolysis activity
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0030286 C dynein complex
GO:0030529 C ribonucleoprotein complex
GO:0030723 P ovarian fusome organization
GO:0034063 P stress granule assembly
GO:0034501 P protein localization to kinetochore
GO:0035011 P melanotic encapsulation of foreign target
GO:0040001 P establishment of mitotic spindle localization
GO:0040003 P chitin-based cuticle development
GO:0042623 F ATP hydrolysis activity
GO:0043005 C neuron projection
GO:0045169 C fusome
GO:0045172 C germline ring canal
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045478 P fusome organization
GO:0045505 F dynein intermediate chain binding
GO:0046604 P positive regulation of mitotic centrosome separation
GO:0047497 P mitochondrion transport along microtubule
GO:0048134 P germ-line cyst formation
GO:0048311 P mitochondrion distribution
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0050658 P RNA transport
GO:0051237 P maintenance of RNA location
GO:0051642 P centrosome localization
GO:0051683 P establishment of Golgi localization
GO:0051959 F dynein light intermediate chain binding
GO:1904115 C axon cytoplasm
GO:1904801 P positive regulation of neuron remodeling
3896 O_BomaMSG13507_internal:A_BomaMSG_c23034_g1_i2
591bp
dynein_heavy_chain,_cytoplasmic_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000776 C kinetochore
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005868 C cytoplasmic dynein complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005938 C cell cortex
GO:0006886 P intracellular protein transport
GO:0007018 P microtubule-based movement
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007098 P centrosome cycle
GO:0007279 P pole cell formation
GO:0007282 P cystoblast division
GO:0007294 P germarium-derived oocyte fate determination
GO:0007298 P border follicle cell migration
GO:0007301 P female germline ring canal formation
GO:0007312 P oocyte nucleus migration involved in oocyte dorsal/ventral axis specification
GO:0007349 P cellularization
GO:0007405 P neuroblast proliferation
GO:0008088 P axo-dendritic transport
GO:0008090 P retrograde axonal transport
GO:0008298 P intracellular mRNA localization
GO:0008569 F minus-end-directed microtubule motor activity
GO:0016319 P mushroom body development
GO:0016887 F ATP hydrolysis activity
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0030286 C dynein complex
GO:0030529 C ribonucleoprotein complex
GO:0030723 P ovarian fusome organization
GO:0034063 P stress granule assembly
GO:0034501 P protein localization to kinetochore
GO:0035011 P melanotic encapsulation of foreign target
GO:0040001 P establishment of mitotic spindle localization
GO:0040003 P chitin-based cuticle development
GO:0042623 F ATP hydrolysis activity
GO:0043005 C neuron projection
GO:0045169 C fusome
GO:0045172 C germline ring canal
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045478 P fusome organization
GO:0045505 F dynein intermediate chain binding
GO:0046604 P positive regulation of mitotic centrosome separation
GO:0047497 P mitochondrion transport along microtubule
GO:0048134 P germ-line cyst formation
GO:0048311 P mitochondrion distribution
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0050658 P RNA transport
GO:0051237 P maintenance of RNA location
GO:0051642 P centrosome localization
GO:0051683 P establishment of Golgi localization
GO:0051959 F dynein light intermediate chain binding
GO:1904115 C axon cytoplasm
GO:1904801 P positive regulation of neuron remodeling
3897 O_BomaMSG13508_5prime_partial:A_BomaMSG_c23035_g1_i1
282bp
mitogen-activated_protein_kinase_kinase_kinase_7_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000186 P obsolete activation of MAPKK activity
GO:0000187 P obsolete activation of MAPK activity
GO:0000287 F magnesium ion binding
GO:0002223 P stimulatory C-type lectin receptor signaling pathway
GO:0002726 P positive regulation of T cell cytokine production
GO:0002755 P MyD88-dependent toll-like receptor signaling pathway
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004709 F MAP kinase kinase kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007223 P Wnt signaling pathway, calcium modulating pathway
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0007250 P activation of NF-kappaB-inducing kinase activity
GO:0007252 P I-kappaB phosphorylation
GO:0007254 P JNK cascade
GO:0008385 C IkappaB kinase complex
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0032743 P positive regulation of interleukin-2 production
GO:0038095 P Fc-epsilon receptor signaling pathway
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043507 P positive regulation of JUN kinase activity
GO:0043966 P histone H3 acetylation
GO:0046872 F metal ion binding
GO:0050852 P T cell receptor signaling pathway
GO:0050870 P positive regulation of T cell activation
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0051403 P stress-activated MAPK cascade
GO:0070423 P nucleotide-binding oligomerization domain containing signaling pathway
GO:0097110 F scaffold protein binding
3898 O_BomaMSG13509_complete:A_BomaMSG_c23037_g1_i1
447bp
sorting_nexin-17_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007165 P signal transduction
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:1990126 P endocytic recycling
3899 O_BomaMSG1350_5prime_partial:A_BomaMSG_c5631_g1_i1
496bp
probable_citrate_synthase_2,_mitochondrial_[Bombyx_mori]
GO:0004108 F citrate (Si)-synthase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005975 P carbohydrate metabolic process
GO:0006099 P tricarboxylic acid cycle
GO:0006101 P citrate metabolic process
GO:0016740 F transferase activity
GO:0046912 F acyltransferase, acyl groups converted into alkyl on transfer
3900 O_BomaMSG13510_complete:A_BomaMSG_c23037_g1_i2
482bp
sorting_nexin-17_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007165 P signal transduction
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:1990126 P endocytic recycling
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