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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3751 O_BomaMSG13377_complete:A_BomaMSG_c22981_g1_i2
244bp
3752 O_BomaMSG13378_5prime_partial:A_BomaMSG_c22982_g1_i1
161bp
PREDICTED:_facilitated_trehalose_transporter_Tret1-like_[Papilio_machaon]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
3753 O_BomaMSG13379_5prime_partial:A_BomaMSG_c22982_g1_i2
248bp
facilitated_trehalose_transporter_Tret1-like_isoform_X2_[Helicoverpa_armigera]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
3754 O_BomaMSG1337_internal:A_BomaMSG_c5537_g1_i1
160bp
protein_Daple_[Bombyx_mori]
GO:0001932 P regulation of protein phosphorylation
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0007399 P nervous system development
GO:0008017 F microtubule binding
GO:0010975 P regulation of neuron projection development
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0031410 C cytoplasmic vesicle
GO:0031929 P TOR signaling
GO:0032148 P activation of protein kinase B activity
GO:0032956 P regulation of actin cytoskeleton organization
GO:0035091 F phosphatidylinositol binding
GO:0042127 P regulation of cell population proliferation
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0043422 F protein kinase B binding
GO:0061024 P membrane organization
3755 O_BomaMSG13380_complete:A_BomaMSG_c22982_g1_i2
109bp
3756 O_BomaMSG13381_3prime_partial:A_BomaMSG_c22984_g1_i1
456bp
probable_4-coumarate--CoA_ligase_3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0008152 P metabolic process
GO:0009698 P phenylpropanoid metabolic process
GO:0016207 F 4-coumarate-CoA ligase activity
GO:0016874 F ligase activity
3757 O_BomaMSG13382_complete:A_BomaMSG_c22984_g1_i1
140bp
3758 O_BomaMSG13383_3prime_partial:A_BomaMSG_c22984_g1_i2
456bp
probable_4-coumarate--CoA_ligase_3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0008152 P metabolic process
GO:0009698 P phenylpropanoid metabolic process
GO:0016207 F 4-coumarate-CoA ligase activity
GO:0016874 F ligase activity
3759 O_BomaMSG13384_complete:A_BomaMSG_c22984_g1_i2
140bp
3760 O_BomaMSG13385_3prime_partial:A_BomaMSG_c22984_g1_i3
353bp
probable_4-coumarate--CoA_ligase_3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0008152 P metabolic process
GO:0009698 P phenylpropanoid metabolic process
GO:0016207 F 4-coumarate-CoA ligase activity
GO:0016874 F ligase activity
3761 O_BomaMSG13386_complete:A_BomaMSG_c22984_g1_i3
140bp
3762 O_BomaMSG13387_complete:A_BomaMSG_c22986_g2_i1
225bp
polycomb_group_RING_finger_protein_3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0031519 C PcG protein complex
GO:0046872 F metal ion binding
3763 O_BomaMSG13388_internal:A_BomaMSG_c22987_g1_i1
358bp
von_Willebrand_factor_A_domain-containing_protein_9_[Bombyx_mori]
3764 O_BomaMSG13389_5prime_partial:A_BomaMSG_c22987_g1_i1
159bp
3765 O_BomaMSG1338_internal:A_BomaMSG_c5541_g1_i1
131bp
3766 O_BomaMSG13390_internal:A_BomaMSG_c22987_g1_i2
179bp
von_Willebrand_factor_A_domain-containing_protein_9_[Bombyx_mori]
3767 O_BomaMSG13391_complete:A_BomaMSG_c22988_g1_i1
188bp
3768 O_BomaMSG13392_complete:A_BomaMSG_c22988_g1_i1
143bp
transmembrane_protein_184B_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008201 F heparin binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0030667 C secretory granule membrane
GO:0031901 C early endosome membrane
GO:0048471 C perinuclear region of cytoplasm
3769 O_BomaMSG13393_complete:A_BomaMSG_c22988_g1_i2
371bp
transmembrane_protein_184B_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
3770 O_BomaMSG13394_complete:A_BomaMSG_c22988_g1_i2
181bp
3771 O_BomaMSG13395_complete:A_BomaMSG_c22988_g1_i3
165bp
3772 O_BomaMSG13396_complete:A_BomaMSG_c22988_g1_i3
143bp
transmembrane_protein_184B_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008201 F heparin binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0030667 C secretory granule membrane
GO:0031901 C early endosome membrane
GO:0048471 C perinuclear region of cytoplasm
3773 O_BomaMSG13397_internal:A_BomaMSG_c22989_g1_i1
560bp
integrator_complex_subunit_2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016180 P snRNA processing
GO:0031965 C nuclear membrane
GO:0032039 C integrator complex
GO:0042795 P snRNA transcription by RNA polymerase II
3774 O_BomaMSG13398_internal:A_BomaMSG_c22991_g1_i1
529bp
roquin-1_isoform_X2_[Bombyx_mori]
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0010494 C cytoplasmic stress granule
GO:0010608 P posttranscriptional regulation of gene expression
GO:0035613 F RNA stem-loop binding
GO:0042129 P regulation of T cell proliferation
GO:0046872 F metal ion binding
GO:0050863 P regulation of T cell activation
GO:0061014 P positive regulation of mRNA catabolic process
GO:0061158 P 3'-UTR-mediated mRNA destabilization
GO:0071347 P cellular response to interleukin-1
3775 O_BomaMSG13399_3prime_partial:A_BomaMSG_c22991_g1_i1
122bp
3776 O_BomaMSG1339_internal:A_BomaMSG_c5541_g1_i1
130bp
transmembrane_protein_131_homolog,_partial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
3777 O_BomaMSG133_internal:A_BomaMSG_c627_g1_i1
106bp
multiple_epidermal_growth_factor-like_domains_protein_8_[Bombyx_mori]
GO:0003143 P embryonic heart tube morphogenesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007368 P determination of left/right symmetry
GO:0010468 P regulation of gene expression
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030326 P embryonic limb morphogenesis
GO:0030509 P BMP signaling pathway
GO:0035108 P limb morphogenesis
GO:0042074 P cell migration involved in gastrulation
GO:0048704 P embryonic skeletal system morphogenesis
GO:0048842 P positive regulation of axon extension involved in axon guidance
GO:0055113 P epiboly involved in gastrulation with mouth forming second
GO:0060971 P embryonic heart tube left/right pattern formation
GO:0060972 P left/right pattern formation
GO:0060976 P coronary vasculature development
GO:0061371 P determination of heart left/right asymmetry
GO:0070062 C extracellular exosome
GO:0071907 P determination of digestive tract left/right asymmetry
GO:0097094 P craniofacial suture morphogenesis
GO:0097155 P fasciculation of sensory neuron axon
3778 O_BomaMSG13400_internal:A_BomaMSG_c22991_g1_i2
126bp
bromodomain-containing_protein_DDB_G0280777-like_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001047 F core promoter sequence-specific DNA binding
GO:0001190 F obsolete transcriptional activator activity, RNA polymerase II transcription factor binding
GO:0001525 P angiogenesis
GO:0001669 C acrosomal vesicle
GO:0001701 P in utero embryonic development
GO:0001708 P cell fate specification
GO:0001726 C ruffle
GO:0001837 P epithelial to mesenchymal transition
GO:0001889 P liver development
GO:0001947 P heart looping
GO:0002040 P sprouting angiogenesis
GO:0002052 P positive regulation of neuroblast proliferation
GO:0002193 C MAML1-RBP-Jkappa- ICN1 complex
GO:0002437 P inflammatory response to antigenic stimulus
GO:0003157 P endocardium development
GO:0003160 P endocardium morphogenesis
GO:0003162 P atrioventricular node development
GO:0003169 P coronary vein morphogenesis
GO:0003180 P aortic valve morphogenesis
GO:0003181 P atrioventricular valve morphogenesis
GO:0003184 P pulmonary valve morphogenesis
GO:0003192 P mitral valve formation
GO:0003197 P endocardial cushion development
GO:0003198 P epithelial to mesenchymal transition involved in endocardial cushion formation
GO:0003203 P endocardial cushion morphogenesis
GO:0003207 P cardiac chamber formation
GO:0003208 P cardiac ventricle morphogenesis
GO:0003209 P cardiac atrium morphogenesis
GO:0003213 P cardiac right atrium morphogenesis
GO:0003214 P cardiac left ventricle morphogenesis
GO:0003219 P cardiac right ventricle formation
GO:0003222 P ventricular trabecula myocardium morphogenesis
GO:0003241 P growth involved in heart morphogenesis
GO:0003256 P regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation
GO:0003264 P regulation of cardioblast proliferation
GO:0003270 P Notch signaling pathway involved in regulation of secondary heart field cardioblast proliferation
GO:0003273 P cell migration involved in endocardial cushion formation
GO:0003344 P pericardium morphogenesis
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004857 F enzyme inhibitor activity
GO:0004872 F signaling receptor activity
GO:0005112 F Notch binding
GO:0005509 F calcium ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006959 P humoral immune response
GO:0007219 P Notch signaling pathway
GO:0007221 P positive regulation of transcription of Notch receptor target
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0007368 P determination of left/right symmetry
GO:0007386 P compartment pattern specification
GO:0007409 P axonogenesis
GO:0007420 P brain development
GO:0007440 P foregut morphogenesis
GO:0007492 P endoderm development
GO:0007507 P heart development
GO:0008284 P positive regulation of cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0008544 P epidermis development
GO:0008593 P regulation of Notch signaling pathway
GO:0009912 P auditory receptor cell fate commitment
GO:0009986 C cell surface
GO:0010001 P glial cell differentiation
GO:0010468 P regulation of gene expression
GO:0010718 P positive regulation of epithelial to mesenchymal transition
GO:0010812 P negative regulation of cell-substrate adhesion
GO:0010832 P negative regulation of myotube differentiation
GO:0014031 P mesenchymal cell development
GO:0014807 P regulation of somitogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0019899 F enzyme binding
GO:0021515 P cell differentiation in spinal cord
GO:0021915 P neural tube development
GO:0030027 C lamellipodium
GO:0030154 P cell differentiation
GO:0030182 P neuron differentiation
GO:0030216 P keratinocyte differentiation
GO:0030279 P negative regulation of ossification
GO:0030324 P lung development
GO:0030326 P embryonic limb morphogenesis
GO:0030334 P regulation of cell migration
GO:0030335 P positive regulation of cell migration
GO:0030513 P positive regulation of BMP signaling pathway
GO:0030514 P negative regulation of BMP signaling pathway
GO:0030900 P forebrain development
GO:0031069 P hair follicle morphogenesis
GO:0031100 P animal organ regeneration
GO:0031410 C cytoplasmic vesicle
GO:0031490 F chromatin DNA binding
GO:0031960 P response to corticosteroid
GO:0032495 P response to muramyl dipeptide
GO:0032496 P response to lipopolysaccharide
GO:0035116 P embryonic hindlimb morphogenesis
GO:0035148 P tube formation
GO:0035914 P skeletal muscle cell differentiation
GO:0035924 P cellular response to vascular endothelial growth factor stimulus
GO:0042127 P regulation of cell population proliferation
GO:0042246 P tissue regeneration
GO:0043065 P positive regulation of apoptotic process
GO:0043086 P negative regulation of catalytic activity
GO:0043235 C receptor complex
GO:0043565 F sequence-specific DNA binding
GO:0045070 P positive regulation of viral genome replication
GO:0045165 P cell fate commitment
GO:0045596 P negative regulation of cell differentiation
GO:0045603 P positive regulation of endothelial cell differentiation
GO:0045607 P regulation of inner ear auditory receptor cell differentiation
GO:0045608 P negative regulation of inner ear auditory receptor cell differentiation
GO:0045618 P positive regulation of keratinocyte differentiation
GO:0045662 P negative regulation of myoblast differentiation
GO:0045665 P negative regulation of neuron differentiation
GO:0045668 P negative regulation of osteoblast differentiation
GO:0045687 P positive regulation of glial cell differentiation
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0045955 P negative regulation of calcium ion-dependent exocytosis
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0046533 P negative regulation of photoreceptor cell differentiation
GO:0046872 F metal ion binding
GO:0046982 F protein heterodimerization activity
GO:0048103 P somatic stem cell division
GO:0048663 P neuron fate commitment
GO:0048708 P astrocyte differentiation
GO:0048709 P oligodendrocyte differentiation
GO:0048711 P positive regulation of astrocyte differentiation
GO:0048715 P negative regulation of oligodendrocyte differentiation
GO:0048754 P branching morphogenesis of an epithelial tube
GO:0050434 P positive regulation of viral transcription
GO:0050678 P regulation of epithelial cell proliferation
GO:0050679 P positive regulation of epithelial cell proliferation
GO:0050767 P regulation of neurogenesis
GO:0050768 P negative regulation of neurogenesis
GO:0050793 P regulation of developmental process
GO:0055008 P cardiac muscle tissue morphogenesis
GO:0060038 P cardiac muscle cell proliferation
GO:0060045 P positive regulation of cardiac muscle cell proliferation
GO:0060253 P negative regulation of glial cell proliferation
GO:0060271 P cilium assembly
GO:0060317 P cardiac epithelial to mesenchymal transition
GO:0060411 P cardiac septum morphogenesis
GO:0060412 P ventricular septum morphogenesis
GO:0060528 P secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development
GO:0060548 P negative regulation of cell death
GO:0060740 P prostate gland epithelium morphogenesis
GO:0060768 P regulation of epithelial cell proliferation involved in prostate gland development
GO:0060842 P arterial endothelial cell differentiation
GO:0060843 P venous endothelial cell differentiation
GO:0060948 P cardiac vascular smooth muscle cell development
GO:0060956 P endocardial cell differentiation
GO:0060979 P vasculogenesis involved in coronary vascular morphogenesis
GO:0060982 P coronary artery morphogenesis
GO:0061314 P Notch signaling involved in heart development
GO:0061384 P heart trabecula morphogenesis
GO:0061419 P positive regulation of transcription from RNA polymerase II promoter in response to hypoxia
GO:0070986 P left/right axis specification
GO:0071372 P cellular response to follicle-stimulating hormone stimulus
GO:0071944 C cell periphery
GO:0072017 P distal tubule development
GO:0072044 P collecting duct development
GO:0072144 P glomerular mesangial cell development
GO:0072602 P interleukin-4 production
GO:0090051 P negative regulation of cell migration involved in sprouting angiogenesis
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0097150 P neuronal stem cell population maintenance
GO:1901201 P regulation of extracellular matrix assembly
GO:1902263 P apoptotic process involved in embryonic digit morphogenesis
GO:2000737 P negative regulation of stem cell differentiation
GO:2000811 P negative regulation of anoikis
GO:2000974 P negative regulation of pro-B cell differentiation
GO:2001027 P negative regulation of endothelial cell chemotaxis
3779 O_BomaMSG13401_internal:A_BomaMSG_c22991_g1_i3
433bp
roquin-1_isoform_X2_[Bombyx_mori]
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0010494 C cytoplasmic stress granule
GO:0010608 P posttranscriptional regulation of gene expression
GO:0035613 F RNA stem-loop binding
GO:0042129 P regulation of T cell proliferation
GO:0046872 F metal ion binding
GO:0050863 P regulation of T cell activation
GO:0061014 P positive regulation of mRNA catabolic process
GO:0061158 P 3'-UTR-mediated mRNA destabilization
GO:0071347 P cellular response to interleukin-1
3780 O_BomaMSG13402_internal:A_BomaMSG_c22991_g1_i5
402bp
roquin-1_isoform_X2_[Bombyx_mori]
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0010494 C cytoplasmic stress granule
GO:0010608 P posttranscriptional regulation of gene expression
GO:0035613 F RNA stem-loop binding
GO:0042129 P regulation of T cell proliferation
GO:0046872 F metal ion binding
GO:0050863 P regulation of T cell activation
GO:0061014 P positive regulation of mRNA catabolic process
GO:0061158 P 3'-UTR-mediated mRNA destabilization
GO:0071347 P cellular response to interleukin-1
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