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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3721 O_BomaMSG1334_internal:A_BomaMSG_c5521_g1_i1
101bp
C-Maf-inducing_protein_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
3722 O_BomaMSG13350_internal:A_BomaMSG_c22971_g2_i1
194bp
ER_membrane_protein_complex_subunit_1_isoform_X2_[Bombyx_mori]
3723 O_BomaMSG13351_5prime_partial:A_BomaMSG_c22971_g2_i1
177bp
3724 O_BomaMSG13352_internal:A_BomaMSG_c22971_g2_i2
219bp
ER_membrane_protein_complex_subunit_1_isoform_X1_[Bombyx_mori]
3725 O_BomaMSG13353_5prime_partial:A_BomaMSG_c22971_g2_i2
177bp
3726 O_BomaMSG13354_3prime_partial:A_BomaMSG_c22972_g1_i1
210bp
nuclear_autoantigenic_sperm_protein_[Bombyx_mori]
GO:0005634 C nucleus
3727 O_BomaMSG13355_5prime_partial:A_BomaMSG_c22972_g1_i1
159bp
3728 O_BomaMSG13356_internal:A_BomaMSG_c22973_g1_i1
343bp
PREDICTED:_protein_bric-a-brac_2-like_isoform_X3_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0003680 F minor groove of adenine-thymine-rich DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005701 C polytene chromosome chromocenter
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007455 P eye-antennal disc morphogenesis
GO:0007478 P leg disc morphogenesis
GO:0019233 P sensory perception of pain
GO:0061040 P female gonad morphogenesis
3729 O_BomaMSG13357_3prime_partial:A_BomaMSG_c22974_g1_i1
383bp
ribosomal_L1_domain-containing_protein_CG13096_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0019233 P sensory perception of pain
3730 O_BomaMSG13358_3prime_partial:A_BomaMSG_c22975_g1_i2
145bp
elongation_factor_Ts_[Bombyx_mori]
GO:0003746 F translation elongation factor activity
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006414 P translational elongation
3731 O_BomaMSG13359_internal:A_BomaMSG_c22975_g1_i3
142bp
elongation_factor_Ts_[Bombyx_mori]
GO:0003746 F translation elongation factor activity
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006414 P translational elongation
3732 O_BomaMSG1335_3prime_partial:A_BomaMSG_c5522_g1_i1
201bp
ATP-binding_cassette_sub-family_D_member_3,_partial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005324 F long-chain fatty acid transporter activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005782 C peroxisomal matrix
GO:0006633 P fatty acid biosynthetic process
GO:0006635 P fatty acid beta-oxidation
GO:0006810 P transport
GO:0007031 P peroxisome organization
GO:0014070 P response to organic cyclic compound
GO:0015910 P long-chain fatty acid import into peroxisome
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042493 P response to xenobiotic stimulus
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042760 P very long-chain fatty acid catabolic process
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0043621 F protein self-association
GO:0055085 P transmembrane transport
3733 O_BomaMSG13360_3prime_partial:A_BomaMSG_c22975_g1_i4
262bp
elongation_factor_Ts_[Bombyx_mori]
GO:0003746 F translation elongation factor activity
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006414 P translational elongation
3734 O_BomaMSG13361_complete:A_BomaMSG_c22976_g1_i1
397bp
pyruvate_carboxylase,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0004075 F biotin carboxylase activity
GO:0004736 F pyruvate carboxylase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0006090 P pyruvate metabolic process
GO:0006094 P gluconeogenesis
GO:0006629 P lipid metabolic process
GO:0008152 P metabolic process
GO:0009374 F biotin binding
GO:0010629 P negative regulation of gene expression
GO:0016874 F ligase activity
GO:0019074 P viral RNA genome packaging
GO:0044791 P obsolete positive regulation by host of viral release from host cell
GO:0044794 P positive regulation by host of viral process
GO:0046872 F metal ion binding
3735 O_BomaMSG13362_complete:A_BomaMSG_c22976_g1_i1
196bp
Uncharacterised_protein_[Mycobacterium_abscessus_subsp._abscessus]
3736 O_BomaMSG13363_5prime_partial:A_BomaMSG_c22976_g1_i2
212bp
pyruvate_carboxylase,_mitochondrial_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0004075 F biotin carboxylase activity
GO:0004736 F pyruvate carboxylase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0006090 P pyruvate metabolic process
GO:0006094 P gluconeogenesis
GO:0006629 P lipid metabolic process
GO:0008152 P metabolic process
GO:0009374 F biotin binding
GO:0010629 P negative regulation of gene expression
GO:0016874 F ligase activity
GO:0019074 P viral RNA genome packaging
GO:0044791 P obsolete positive regulation by host of viral release from host cell
GO:0044794 P positive regulation by host of viral process
GO:0046872 F metal ion binding
3737 O_BomaMSG13364_3prime_partial:A_BomaMSG_c22976_g1_i2
122bp
3738 O_BomaMSG13365_complete:A_BomaMSG_c22977_g1_i1
785bp
cullin-1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006513 P protein monoubiquitination
GO:0006915 P apoptotic process
GO:0008283 P cell population proliferation
GO:0009887 P animal organ morphogenesis
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:1990452 C Parkin-FBXW7-Cul1 ubiquitin ligase complex
3739 O_BomaMSG13366_complete:A_BomaMSG_c22977_g1_i1
255bp
3740 O_BomaMSG13367_complete:A_BomaMSG_c22977_g1_i2
785bp
cullin-1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006513 P protein monoubiquitination
GO:0006915 P apoptotic process
GO:0008283 P cell population proliferation
GO:0009887 P animal organ morphogenesis
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:1990452 C Parkin-FBXW7-Cul1 ubiquitin ligase complex
3741 O_BomaMSG13368_complete:A_BomaMSG_c22977_g1_i2
255bp
3742 O_BomaMSG13369_complete:A_BomaMSG_c22978_g1_i1
180bp
protein_max_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030425 C dendrite
GO:0042995 C cell projection
GO:0046983 F protein dimerization activity
GO:0071339 C MLL1 complex
3743 O_BomaMSG1336_complete:A_BomaMSG_c5522_g1_i1
104bp
3744 O_BomaMSG13370_complete:A_BomaMSG_c22978_g1_i2
171bp
protein_max_isoform_X3_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030425 C dendrite
GO:0042995 C cell projection
GO:0046983 F protein dimerization activity
GO:0071339 C MLL1 complex
3745 O_BomaMSG13371_5prime_partial:A_BomaMSG_c22979_g1_i1
156bp
uncharacterized_protein_LOC101735685_[Bombyx_mori]
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000287 F magnesium ion binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005737 C cytoplasm
GO:0006259 P DNA metabolic process
GO:0008310 F single-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008408 F 3'-5' exonuclease activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0016888 F endodeoxyribonuclease activity, producing 5'-phosphomonoesters
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
3746 O_BomaMSG13372_complete:A_BomaMSG_c22979_g1_i2
305bp
uncharacterized_protein_LOC101735685_[Bombyx_mori]
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000287 F magnesium ion binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005737 C cytoplasm
GO:0006259 P DNA metabolic process
GO:0008310 F single-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008408 F 3'-5' exonuclease activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0016888 F endodeoxyribonuclease activity, producing 5'-phosphomonoesters
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
3747 O_BomaMSG13373_internal:A_BomaMSG_c22980_g1_i1
241bp
fibrosin-1-like_protein_isoform_X5_[Bombyx_mori]
3748 O_BomaMSG13374_5prime_partial:A_BomaMSG_c22980_g1_i1
206bp
3749 O_BomaMSG13375_complete:A_BomaMSG_c22980_g1_i1
118bp
3750 O_BomaMSG13376_complete:A_BomaMSG_c22981_g1_i2
503bp
LOW_QUALITY_PROTEIN:_facilitated_trehalose_transporter_Tret1-2_homolog_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
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