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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2971 O_BomaMSG12675_5prime_partial:A_BomaMSG_c22661_g1_i1
180bp
organic_cation_transporter_protein_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006915 P apoptotic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
2972 O_BomaMSG12676_3prime_partial:A_BomaMSG_c22662_g1_i1
595bp
NF-kappa-B_essential_modulator_isoform_X1_[Bombyx_mori]
GO:0000042 P protein localization to Golgi apparatus
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006914 P autophagy
GO:0007409 P axonogenesis
GO:0016023 C cytoplasmic vesicle
GO:0016192 P vesicle-mediated transport
GO:0031410 C cytoplasmic vesicle
GO:0043122 P regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043130 F ubiquitin binding
GO:0051648 P vesicle localization
GO:0070530 F K63-linked polyubiquitin modification-dependent protein binding
GO:0090161 P Golgi ribbon formation
2973 O_BomaMSG12677_5prime_partial:A_BomaMSG_c22662_g1_i1
196bp
2974 O_BomaMSG12678_complete:A_BomaMSG_c22662_g1_i1
127bp
2975 O_BomaMSG12679_complete:A_BomaMSG_c22662_g1_i1
122bp
2976 O_BomaMSG1267_internal:A_BomaMSG_c5220_g1_i1
173bp
pecanex-like_protein_1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007029 P endoplasmic reticulum organization
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030154 P cell differentiation
GO:0046331 P lateral inhibition
2977 O_BomaMSG12680_internal:A_BomaMSG_c22662_g1_i2
150bp
2978 O_BomaMSG12681_3prime_partial:A_BomaMSG_c22662_g1_i2
105bp
optineurin_isoform_X3_[Bombyx_mori]
GO:0000042 P protein localization to Golgi apparatus
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006914 P autophagy
GO:0007409 P axonogenesis
GO:0016023 C cytoplasmic vesicle
GO:0016192 P vesicle-mediated transport
GO:0031410 C cytoplasmic vesicle
GO:0043122 P regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043130 F ubiquitin binding
GO:0051648 P vesicle localization
GO:0070530 F K63-linked polyubiquitin modification-dependent protein binding
GO:0090161 P Golgi ribbon formation
2979 O_BomaMSG12682_internal:A_BomaMSG_c22663_g1_i1
461bp
BTB/POZ_domain-containing_protein_9_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0007616 P long-term memory
GO:0008344 P adult locomotory behavior
GO:0042428 P serotonin metabolic process
GO:0042748 P circadian sleep/wake cycle, non-REM sleep
GO:0048512 P circadian behavior
GO:0050951 P sensory perception of temperature stimulus
GO:0060586 P multicellular organismal iron ion homeostasis
GO:1900242 P regulation of synaptic vesicle endocytosis
2980 O_BomaMSG12683_5prime_partial:A_BomaMSG_c22663_g1_i1
424bp
2981 O_BomaMSG12684_5prime_partial:A_BomaMSG_c22664_g1_i1
996bp
TRAS3_[Bombyx_mori]
2982 O_BomaMSG12685_complete:A_BomaMSG_c22664_g1_i1
129bp
2983 O_BomaMSG12686_complete:A_BomaMSG_c22664_g1_i1
120bp
2984 O_BomaMSG12687_5prime_partial:A_BomaMSG_c22664_g1_i1
108bp
2985 O_BomaMSG12688_5prime_partial:A_BomaMSG_c22664_g1_i2
437bp
TRAS3_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2986 O_BomaMSG12689_5prime_partial:A_BomaMSG_c22664_g1_i2
108bp
2987 O_BomaMSG1268_internal:A_BomaMSG_c5222_g1_i1
158bp
neurexin-4_isoform_X3_[Bombyx_mori]
GO:0003015 P heart process
GO:0004888 F transmembrane signaling receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005918 C septate junction
GO:0005919 C pleated septate junction
GO:0007155 P cell adhesion
GO:0007163 P establishment or maintenance of cell polarity
GO:0007165 P signal transduction
GO:0007391 P dorsal closure
GO:0008039 P synaptic target recognition
GO:0008065 P establishment of blood-nerve barrier
GO:0008104 P protein localization
GO:0008366 P axon ensheathment
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016080 P synaptic vesicle targeting
GO:0016081 P synaptic vesicle docking
GO:0019991 P septate junction assembly
GO:0021682 P nerve maturation
GO:0030054 C cell junction
GO:0035151 P regulation of tube size, open tracheal system
GO:0045216 P cell-cell junction organization
GO:0048786 C presynaptic active zone
GO:0060857 P establishment of glial blood-brain barrier
GO:0061343 P cell adhesion involved in heart morphogenesis
GO:0072553 P terminal button organization
GO:0097105 P presynaptic membrane assembly
2988 O_BomaMSG12690_5prime_partial:A_BomaMSG_c22664_g1_i3
124bp
TRAS3_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2989 O_BomaMSG12691_5prime_partial:A_BomaMSG_c22664_g1_i3
108bp
2990 O_BomaMSG12692_complete:A_BomaMSG_c22666_g1_i1
418bp
pyruvate_dehydrogenase_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004740 F pyruvate dehydrogenase (acetyl-transferring) kinase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005975 P carbohydrate metabolic process
GO:0006006 P glucose metabolic process
GO:0006090 P pyruvate metabolic process
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
2991 O_BomaMSG12693_3prime_partial:A_BomaMSG_c22667_g1_i1
261bp
syntaxin_isoform_X1_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000139 C Golgi membrane
GO:0000149 F SNARE binding
GO:0000407 C phagophore assembly site
GO:0005484 F SNAP receptor activity
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006906 P vesicle fusion
GO:0010008 C endosome membrane
GO:0012505 C endomembrane system
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0031083 C BLOC-1 complex
GO:0031201 C SNARE complex
GO:0031982 C vesicle
GO:0033344 P cholesterol efflux
GO:0045121 C membrane raft
GO:0045335 C phagocytic vesicle
GO:0048278 P vesicle docking
GO:0050821 P protein stabilization
GO:0070062 C extracellular exosome
2992 O_BomaMSG12694_3prime_partial:A_BomaMSG_c22668_g1_i1
186bp
aquaporin_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2993 O_BomaMSG12695_3prime_partial:A_BomaMSG_c22668_g1_i2
181bp
aquaporin_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2994 O_BomaMSG12696_internal:A_BomaMSG_c22668_g1_i3
130bp
aquaporin_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2995 O_BomaMSG12697_internal:A_BomaMSG_c22668_g1_i4
156bp
aquaporin_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2996 O_BomaMSG12698_3prime_partial:A_BomaMSG_c22669_g1_i1
166bp
uncharacterized_protein_LOC101744707_[Bombyx_mori]
2997 O_BomaMSG12699_internal:A_BomaMSG_c22669_g1_i2
578bp
uncharacterized_protein_LOC101744707_[Bombyx_mori]
2998 O_BomaMSG1269_internal:A_BomaMSG_c5222_g1_i2
132bp
neurexin-4_isoform_X3_[Bombyx_mori]
GO:0003015 P heart process
GO:0004888 F transmembrane signaling receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005918 C septate junction
GO:0005919 C pleated septate junction
GO:0007155 P cell adhesion
GO:0007163 P establishment or maintenance of cell polarity
GO:0007165 P signal transduction
GO:0007391 P dorsal closure
GO:0008039 P synaptic target recognition
GO:0008065 P establishment of blood-nerve barrier
GO:0008104 P protein localization
GO:0008366 P axon ensheathment
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016080 P synaptic vesicle targeting
GO:0016081 P synaptic vesicle docking
GO:0019991 P septate junction assembly
GO:0021682 P nerve maturation
GO:0030054 C cell junction
GO:0035151 P regulation of tube size, open tracheal system
GO:0045216 P cell-cell junction organization
GO:0048786 C presynaptic active zone
GO:0060857 P establishment of glial blood-brain barrier
GO:0061343 P cell adhesion involved in heart morphogenesis
GO:0072553 P terminal button organization
GO:0097105 P presynaptic membrane assembly
2999 O_BomaMSG126_internal:A_BomaMSG_c596_g1_i1
109bp
3000 O_BomaMSG12700_5prime_partial:A_BomaMSG_c22671_g1_i1
269bp
protein_FAM172A_[Bombyx_mori]
GO:0005576 C extracellular region
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