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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
7441 A_BomoIG_DN23383_c0_g1_i1
289bp
FPKM:1.71 TPM:0.95
7442 A_BomoIG_DN23391_c0_g1_i1
420bp
FPKM:0.15 TPM:0.08
7443 A_BomoIG_DN23395_c0_g1_i1
220bp
 uncharacterized_protein_LOC101738909_isoform_X3_[Bombyx_mori]
FPKM:0.56 TPM:0.31
7444 A_BomoIG_DN23396_c0_g1_i1
571bp
FPKM:0.23 TPM:0.13
7445 A_BomoIG_DN23398_c0_g1_i1
219bp
FPKM:0.29 TPM:0.16
7446 A_BomoIG_DN23400_c0_g1_i1
233bp
FPKM:0.00 TPM:0.00
7447 A_BomoIG_DN23402_c0_g1_i1
213bp
FPKM:0.31 TPM:0.17
7448 A_BomoIG_DN23409_c0_g1_i1
299bp
FPKM:0.40 TPM:0.22
7449 A_BomoIG_DN23412_c0_g1_i1
248bp
FPKM:0.41 TPM:0.23
7450 A_BomoIG_DN23414_c0_g1_i1
306bp
FPKM:0.00 TPM:0.00
7451 A_BomoIG_DN23415_c0_g1_i1
205bp
FPKM:0.35 TPM:0.20
7452 A_BomoIG_DN23416_c0_g1_i1
336bp
FPKM:0.32 TPM:0.18
7453 A_BomoIG_DN23416_c0_g2_i1
375bp
FPKM:3.50 TPM:1.95
7454 A_BomoIG_DN23420_c0_g1_i1
269bp
FPKM:0.17 TPM:0.09
7455 A_BomoIG_DN23423_c0_g1_i1
480bp
FPKM:0.18 TPM:0.10
7456 A_BomoIG_DN23424_c0_g1_i1
201bp
FPKM:0.00 TPM:0.00
7457 A_BomoIG_DN23426_c0_g1_i1
201bp
FPKM:0.75 TPM:0.42
7458 A_BomoIG_DN23426_c0_g2_i1
231bp
FPKM:4.89 TPM:2.72
7459 A_BomoIG_DN23428_c0_g1_i1
217bp
 uncharacterized_protein_LOC105841932_[Bombyx_mori]
FPKM:0.29 TPM:0.16
7460 A_BomoIG_DN2342_c0_g1_i1
483bp
FPKM:0.35 TPM:0.20
7461 A_BomoIG_DN23430_c0_g1_i1
297bp
FPKM:0.00 TPM:0.00
7462 A_BomoIG_DN23431_c0_g1_i1
371bp
FPKM:0.36 TPM:0.20
7463 A_BomoIG_DN23435_c0_g1_i1
390bp
 transposase,_partial_[Antheraea_yamamai]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:0.00 TPM:0.00
7464 A_BomoIG_DN23435_c0_g2_i1
255bp
 Transposase_domain_containing_protein_[Haemonchus_contortus]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:0.00 TPM:0.00
7465 A_BomoIG_DN23436_c0_g1_i1
225bp
FPKM:0.00 TPM:0.00
7466 A_BomoIG_DN23441_c0_g1_i1
314bp
FPKM:0.36 TPM:0.20
7467 A_BomoIG_DN23442_c0_g1_i1
282bp
FPKM:1.20 TPM:0.67
7468 A_BomoIG_DN23450_c0_g1_i1
340bp
FPKM:0.10 TPM:0.06
7469 A_BomoIG_DN23451_c0_g1_i1
536bp
FPKM:0.20 TPM:0.11
7470 A_BomoIG_DN23455_c0_g1_i1
236bp
FPKM:1.15 TPM:0.64
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