SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/206471
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
7411 A_BomoIG_DN23320_c0_g1_i1
320bp
FPKM:0.81 TPM:0.45
7412 A_BomoIG_DN23324_c0_g1_i1
537bp
 PREDICTED:_uncharacterized_protein_LOC106116653_[Papilio_xuthus]
FPKM:0.81 TPM:0.45
7413 A_BomoIG_DN23325_c0_g1_i1
248bp
 hypothetical_protein_[Acinetobacter_baumannii]
FPKM:0.00 TPM:0.00
7414 A_BomoIG_DN23325_c0_g2_i1
233bp
FPKM:0.48 TPM:0.27
7415 A_BomoIG_DN23327_c0_g1_i1
248bp
FPKM:0.20 TPM:0.11
7416 A_BomoIG_DN2332_c0_g1_i1
302bp
FPKM:1.56 TPM:0.87
7417 A_BomoIG_DN23330_c0_g1_i1
262bp
FPKM:0.00 TPM:0.00
7418 A_BomoIG_DN23333_c0_g1_i1
210bp
FPKM:0.00 TPM:0.00
7419 A_BomoIG_DN23335_c0_g1_i1
303bp
FPKM:0.00 TPM:0.00
7420 A_BomoIG_DN23343_c0_g1_i1
252bp
FPKM:0.58 TPM:0.33
7421 A_BomoIG_DN23347_c0_g1_i1
410bp
FPKM:0.38 TPM:0.21
7422 A_BomoIG_DN23351_c0_g1_i1
225bp
FPKM:0.26 TPM:0.15
7423 A_BomoIG_DN23352_c0_g1_i1
356bp
FPKM:0.38 TPM:0.21
7424 A_BomoIG_DN23354_c0_g1_i1
236bp
FPKM:0.23 TPM:0.13
7425 A_BomoIG_DN23356_c0_g1_i1
314bp
FPKM:0.12 TPM:0.07
7426 A_BomoIG_DN23359_c0_g1_i1
896bp
FPKM:0.99 TPM:0.55
7427 A_BomoIG_DN23359_c0_g1_i2
509bp
FPKM:0.00 TPM:0.00
7428 A_BomoIG_DN2335_c0_g1_i1
418bp
 macrophage_mannose_receptor_1_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0030246 F carbohydrate binding
FPKM:12.16 TPM:6.77
7429 A_BomoIG_DN23364_c0_g1_i1
1352bp
 uncharacterized_protein_LOC101746761_[Bombyx_mori]
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007416 P synapse assembly
GO:0007611 P learning or memory
GO:0007613 P memory
GO:0007616 P long-term memory
GO:0008345 P larval locomotory behavior
GO:0008355 P olfactory learning
GO:0040011 P locomotion
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048813 P dendrite morphogenesis
GO:0050773 P regulation of dendrite development
FPKM:10.36 TPM:5.77
7430 A_BomoIG_DN23365_c0_g1_i1
428bp
 hypothetical_protein_RF55_19743_[Lasius_niger]
FPKM:0.42 TPM:0.24
7431 A_BomoIG_DN23369_c0_g1_i1
215bp
FPKM:0.00 TPM:0.00
7432 A_BomoIG_DN2336_c0_g1_i1
308bp
FPKM:1.00 TPM:0.56
7433 A_BomoIG_DN23370_c0_g1_i1
215bp
FPKM:0.00 TPM:0.00
7434 A_BomoIG_DN23370_c0_g2_i1
223bp
FPKM:0.27 TPM:0.15
7435 A_BomoIG_DN23371_c0_g1_i1
225bp
FPKM:0.00 TPM:0.00
7436 A_BomoIG_DN23373_c0_g1_i1
236bp
FPKM:2.31 TPM:1.28
7437 A_BomoIG_DN23376_c0_g1_i1
402bp
 TRASDJ,_partial_[Saturnia_japonica]
FPKM:0.86 TPM:0.48
7438 A_BomoIG_DN23377_c0_g1_i1
273bp
FPKM:0.81 TPM:0.45
7439 A_BomoIG_DN2337_c0_g1_i1
760bp
 heat_shock_protein_hsp20.1_[Bombyx_mori]
GO:0006497 P protein lipidation
GO:0007275 P multicellular organism development
GO:0010506 P regulation of autophagy
GO:0010998 P regulation of translational initiation by eIF2 alpha phosphorylation
FPKM:11.70 TPM:6.52
7440 A_BomoIG_DN23380_c0_g1_i1
226bp
 uncharacterized_protein_LOC105841957_[Bombyx_mori]
FPKM:0.00 TPM:0.00
previous next from show/206471

- SilkBase 1999-2023 -