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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
6031 A_BomoIG_DN20952_c0_g1_i1
339bp
FPKM:0.00 TPM:0.00
6032 A_BomoIG_DN20954_c0_g1_i1
352bp
FPKM:0.00 TPM:0.00
6033 A_BomoIG_DN20954_c0_g2_i1
712bp
FPKM:0.17 TPM:0.10
6034 A_BomoIG_DN20956_c0_g1_i1
271bp
FPKM:0.00 TPM:0.00
6035 A_BomoIG_DN20958_c0_g1_i1
600bp
FPKM:0.00 TPM:0.00
6036 A_BomoIG_DN20959_c0_g1_i1
262bp
FPKM:0.35 TPM:0.20
6037 A_BomoIG_DN20962_c0_g1_i1
213bp
FPKM:1.55 TPM:0.86
6038 A_BomoIG_DN20963_c0_g1_i1
764bp
FPKM:1.33 TPM:0.74
6039 A_BomoIG_DN20964_c0_g1_i1
892bp
 gag_pol_polyprotein_[Lasius_niger]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0030430 C host cell cytoplasm
GO:0042025 C host cell nucleus
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0075713 P establishment of integrated proviral latency
GO:0075732 P viral penetration into host nucleus
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:0.24 TPM:0.13
6040 A_BomoIG_DN20968_c0_g1_i1
241bp
FPKM:0.22 TPM:0.12
6041 A_BomoIG_DN20969_c0_g1_i1
293bp
FPKM:0.42 TPM:0.23
6042 A_BomoIG_DN20970_c0_g1_i1
273bp
FPKM:0.32 TPM:0.18
6043 A_BomoIG_DN20970_c0_g2_i1
287bp
FPKM:0.00 TPM:0.00
6044 A_BomoIG_DN20971_c0_g1_i1
220bp
FPKM:1.13 TPM:0.63
6045 A_BomoIG_DN20972_c0_g1_i1
364bp
FPKM:1.10 TPM:0.61
6046 A_BomoIG_DN20973_c0_g1_i1
291bp
FPKM:0.00 TPM:0.00
6047 A_BomoIG_DN20975_c0_g1_i1
237bp
FPKM:0.23 TPM:0.13
6048 A_BomoIG_DN20976_c0_g1_i1
317bp
FPKM:1.30 TPM:0.72
6049 A_BomoIG_DN20976_c0_g1_i2
324bp
FPKM:0.79 TPM:0.44
6050 A_BomoIG_DN20977_c0_g1_i1
239bp
FPKM:0.22 TPM:0.12
6051 A_BomoIG_DN20978_c0_g1_i1
584bp
FPKM:1.53 TPM:0.85
6052 A_BomoIG_DN2097_c0_g1_i1
368bp
FPKM:1.90 TPM:1.06
6053 A_BomoIG_DN20988_c0_g1_i1
336bp
 metastasis-associated_protein_MTA3_isoform_X1_[Bombyx_mori]
FPKM:5.83 TPM:3.25
6054 A_BomoIG_DN20989_c0_g1_i1
311bp
FPKM:0.00 TPM:0.00
6055 A_BomoIG_DN2098_c0_g1_i1
303bp
FPKM:0.13 TPM:0.07
6056 A_BomoIG_DN20996_c0_g1_i1
208bp
FPKM:1.34 TPM:0.75
6057 A_BomoIG_DN2099_c0_g1_i1
555bp
FPKM:0.19 TPM:0.11
6058 A_BomoIG_DN20_c0_g1_i1
250bp
 ATP-dependent_helicase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
6059 A_BomoIG_DN21000_c0_g1_i1
209bp
 ATP-dependent_helicase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
6060 A_BomoIG_DN21004_c0_g1_i1
316bp
FPKM:0.24 TPM:0.13
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