SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/206471
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5911 A_BomoIG_DN20758_c0_g1_i1
1072bp
FPKM:0.23 TPM:0.13
5912 A_BomoIG_DN20758_c0_g1_i2
1136bp
FPKM:0.00 TPM:0.00
5913 A_BomoIG_DN2075_c0_g1_i1
393bp
 uncharacterized_protein_LOC101746952_[Bombyx_mori]
FPKM:0.00 TPM:0.00
5914 A_BomoIG_DN2075_c0_g1_i2
364bp
 uncharacterized_protein_LOC101746952_[Bombyx_mori]
FPKM:0.00 TPM:0.00
5915 A_BomoIG_DN20762_c0_g1_i1
226bp
FPKM:0.26 TPM:0.14
5916 A_BomoIG_DN20765_c0_g1_i1
278bp
 octopamine_receptor_2_isoform_X1_[Bombyx_mori]
FPKM:0.15 TPM:0.09
5917 A_BomoIG_DN20765_c0_g2_i1
296bp
 5-hydroxytryptamine_receptor_1D_isoform_X2_[Bombyx_mori]
GO:0001588 F dopamine neurotransmitter receptor activity, coupled via Gs
GO:0001963 P synaptic transmission, dopaminergic
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0004952 F dopamine neurotransmitter receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007191 P adenylate cyclase-activating dopamine receptor signaling pathway
GO:0007612 P learning
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030285 C integral component of synaptic vesicle membrane
GO:0035240 F dopamine binding
GO:0045211 C postsynaptic membrane
GO:0060158 P phospholipase C-activating dopamine receptor signaling pathway
FPKM:0.14 TPM:0.08
5918 A_BomoIG_DN20766_c0_g1_i1
243bp
FPKM:0.00 TPM:0.00
5919 A_BomoIG_DN20767_c0_g1_i1
340bp
 glucose_dehydrogenase_[FAD,_quinone]-like_[Bombyx_mori]
GO:0008802 F betaine-aldehyde dehydrogenase activity
GO:0008812 F choline dehydrogenase activity
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0019285 P glycine betaine biosynthetic process from choline
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:1.45 TPM:0.81
5920 A_BomoIG_DN20769_c0_g1_i1
849bp
 uncharacterized_protein_LOC101738605_[Bombyx_mori]
FPKM:0.86 TPM:0.48
5921 A_BomoIG_DN20773_c0_g1_i1
1965bp
 DDB1-_and_CUL4-associated_factor_7_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0016363 C nuclear matrix
GO:0016567 P protein ubiquitination
GO:0043234 C protein-containing complex
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
FPKM:18.68 TPM:10.40
5922 A_BomoIG_DN20774_c0_g1_i1
277bp
FPKM:0.94 TPM:0.52
5923 A_BomoIG_DN20776_c0_g1_i1
290bp
FPKM:1.13 TPM:0.63
5924 A_BomoIG_DN20778_c0_g1_i1
468bp
FPKM:0.25 TPM:0.14
5925 A_BomoIG_DN20778_c0_g2_i1
376bp
FPKM:0.52 TPM:0.29
5926 A_BomoIG_DN20780_c0_g1_i1
294bp
FPKM:1.92 TPM:1.07
5927 A_BomoIG_DN20780_c0_g2_i1
646bp
FPKM:0.71 TPM:0.39
5928 A_BomoIG_DN20782_c0_g1_i1
215bp
FPKM:2.11 TPM:1.18
5929 A_BomoIG_DN20784_c0_g1_i1
622bp
FPKM:0.70 TPM:0.39
5930 A_BomoIG_DN20787_c0_g1_i1
265bp
FPKM:0.00 TPM:0.00
5931 A_BomoIG_DN20789_c0_g1_i1
302bp
FPKM:2.86 TPM:1.59
5932 A_BomoIG_DN2078_c0_g1_i1
305bp
FPKM:0.00 TPM:0.00
5933 A_BomoIG_DN20792_c0_g1_i1
260bp
FPKM:0.36 TPM:0.20
5934 A_BomoIG_DN20795_c0_g1_i1
686bp
 multiple_C2_and_transmembrane_domain-containing_protein_1_isoform_X5_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005783 C endoplasmic reticulum
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019722 P calcium-mediated signaling
FPKM:1.06 TPM:0.59
5935 A_BomoIG_DN20795_c0_g2_i1
484bp
 multiple_C2_and_transmembrane_domain-containing_protein_1_isoform_X5_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019722 P calcium-mediated signaling
FPKM:0.76 TPM:0.42
5936 A_BomoIG_DN20800_c0_g1_i1
249bp
 uncharacterized_protein_LOC101739332_[Bombyx_mori]
FPKM:0.00 TPM:0.00
5937 A_BomoIG_DN20801_c0_g1_i1
237bp
FPKM:0.23 TPM:0.13
5938 A_BomoIG_DN20802_c0_g1_i1
336bp
FPKM:0.00 TPM:0.00
5939 A_BomoIG_DN20803_c0_g1_i1
280bp
FPKM:0.00 TPM:0.00
5940 A_BomoIG_DN20806_c0_g1_i1
235bp
FPKM:0.00 TPM:0.00
previous next from show/206471

- SilkBase 1999-2023 -