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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5881 A_BomoIG_DN20710_c0_g1_i1
262bp
FPKM:1.42 TPM:0.79
5882 A_BomoIG_DN20712_c0_g1_i1
243bp
FPKM:0.00 TPM:0.00
5883 A_BomoIG_DN20714_c0_g1_i1
328bp
FPKM:1.44 TPM:0.80
5884 A_BomoIG_DN20715_c0_g1_i1
209bp
 lamin_Dm0_[Bombyx_mori]
FPKM:0.00 TPM:0.00
5885 A_BomoIG_DN20716_c0_g1_i1
413bp
FPKM:0.22 TPM:0.12
5886 A_BomoIG_DN20721_c0_g1_i1
224bp
FPKM:0.53 TPM:0.30
5887 A_BomoIG_DN20723_c0_g1_i1
208bp
FPKM:0.34 TPM:0.19
5888 A_BomoIG_DN20724_c0_g1_i1
458bp
FPKM:1.78 TPM:0.99
5889 A_BomoIG_DN20726_c0_g1_i1
239bp
FPKM:1.70 TPM:0.95
5890 A_BomoIG_DN2072_c0_g1_i1
595bp
FPKM:0.53 TPM:0.29
5891 A_BomoIG_DN20730_c0_g1_i1
349bp
FPKM:0.30 TPM:0.17
5892 A_BomoIG_DN20734_c0_g1_i1
335bp
 LOW_QUALITY_PROTEIN:_protein_abnormal_spindle_[Bombyx_mori]
GO:0000132 P establishment of mitotic spindle orientation
GO:0000226 P microtubule cytoskeleton organization
GO:0000922 C spindle pole
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007017 P microtubule-based process
GO:0007049 P cell cycle
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007097 P nuclear migration
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0008017 F microtubule binding
GO:0030037 P actin filament reorganization involved in cell cycle
GO:0030154 P cell differentiation
GO:0030706 P germarium-derived oocyte differentiation
GO:0030723 P ovarian fusome organization
GO:0030954 P astral microtubule nucleation
GO:0032027 F myosin light chain binding
GO:0048132 P female germ-line stem cell asymmetric division
GO:0048477 P oogenesis
GO:0048854 P brain morphogenesis
GO:0051295 P establishment of meiotic spindle localization
GO:0051297 P centrosome cycle
GO:0051301 P cell division
GO:0051383 P kinetochore organization
GO:0051642 P centrosome localization
FPKM:0.53 TPM:0.30
5893 A_BomoIG_DN20736_c0_g1_i1
329bp
FPKM:0.00 TPM:0.00
5894 A_BomoIG_DN20736_c0_g2_i1
329bp
FPKM:1.10 TPM:0.61
5895 A_BomoIG_DN20739_c0_g1_i1
444bp
FPKM:0.67 TPM:0.37
5896 A_BomoIG_DN2073_c0_g1_i1
275bp
FPKM:0.00 TPM:0.00
5897 A_BomoIG_DN20741_c0_g1_i1
402bp
FPKM:1.01 TPM:0.56
5898 A_BomoIG_DN20742_c0_g1_i1
294bp
FPKM:0.00 TPM:0.00
5899 A_BomoIG_DN20743_c0_g1_i1
434bp
FPKM:6.56 TPM:3.65
5900 A_BomoIG_DN20744_c0_g1_i1
226bp
FPKM:0.00 TPM:0.00
5901 A_BomoIG_DN20745_c0_g1_i1
362bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Plutella_xylostella]
FPKM:1.39 TPM:0.78
5902 A_BomoIG_DN20747_c0_g1_i1
228bp
FPKM:0.51 TPM:0.28
5903 A_BomoIG_DN20747_c0_g2_i1
350bp
FPKM:0.20 TPM:0.11
5904 A_BomoIG_DN20749_c0_g1_i1
569bp
FPKM:2.01 TPM:1.12
5905 A_BomoIG_DN2074_c0_g1_i1
201bp
FPKM:0.75 TPM:0.42
5906 A_BomoIG_DN20751_c0_g1_i1
305bp
 PREDICTED:_delta-1-pyrroline-5-carboxylate_synthase_isoform_X1_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004349 F glutamate 5-kinase activity
GO:0004350 F glutamate-5-semialdehyde dehydrogenase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006561 P proline biosynthetic process
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0016740 F transferase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0055129 P L-proline biosynthetic process
FPKM:0.00 TPM:0.00
5907 A_BomoIG_DN20754_c0_g1_i1
323bp
FPKM:0.23 TPM:0.13
5908 A_BomoIG_DN20756_c0_g1_i1
941bp
 L-dopachrome_tautomerase_yellow-f-like_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0042438 P melanin biosynthetic process
GO:0060179 P male mating behavior
FPKM:0.07 TPM:0.04
5909 A_BomoIG_DN20756_c0_g1_i2
1027bp
 L-dopachrome_tautomerase_yellow-f-like_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0006583 P melanin biosynthetic process from tyrosine
GO:0007275 P multicellular organism development
GO:0042438 P melanin biosynthetic process
GO:0048065 P male courtship behavior, veined wing extension
GO:0048066 P developmental pigmentation
GO:0048067 P cuticle pigmentation
GO:0048082 P regulation of adult chitin-containing cuticle pigmentation
GO:0060179 P male mating behavior
GO:0070451 C cell hair
FPKM:0.93 TPM:0.52
5910 A_BomoIG_DN20757_c0_g1_i1
303bp
FPKM:0.52 TPM:0.29
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