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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2431 A_BomoIG_DN14301_c0_g1_i1
289bp
 DNA-binding_protein_RFX2_[Bombyx_mori]
GO:0000790 C chromatin
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003309 P type B pancreatic cell differentiation
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007368 P determination of left/right symmetry
GO:0030154 P cell differentiation
GO:0031018 P endocrine pancreas development
GO:0042384 P cilium assembly
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048469 P cell maturation
GO:0050796 P regulation of insulin secretion
GO:0060285 P cilium-dependent cell motility
GO:0060287 P epithelial cilium movement involved in determination of left/right asymmetry
GO:0072560 P type B pancreatic cell maturation
GO:2000078 P positive regulation of type B pancreatic cell development
FPKM:0.29 TPM:0.16
2432 A_BomoIG_DN14302_c0_g1_i1
341bp
FPKM:0.52 TPM:0.29
2433 A_BomoIG_DN14303_c0_g1_i1
755bp
FPKM:0.00 TPM:0.00
2434 A_BomoIG_DN14306_c0_g1_i1
392bp
FPKM:0.16 TPM:0.09
2435 A_BomoIG_DN14307_c0_g1_i1
208bp
FPKM:0.34 TPM:0.19
2436 A_BomoIG_DN14307_c0_g1_i2
307bp
FPKM:0.63 TPM:0.35
2437 A_BomoIG_DN14309_c0_g1_i1
659bp
FPKM:0.77 TPM:0.43
2438 A_BomoIG_DN14311_c0_g1_i1
318bp
FPKM:0.94 TPM:0.52
2439 A_BomoIG_DN14315_c0_g1_i1
334bp
FPKM:0.00 TPM:0.00
2440 A_BomoIG_DN1431_c0_g1_i1
264bp
FPKM:0.00 TPM:0.00
2441 A_BomoIG_DN14320_c0_g1_i1
373bp
FPKM:0.09 TPM:0.05
2442 A_BomoIG_DN14323_c0_g1_i1
302bp
FPKM:0.00 TPM:0.00
2443 A_BomoIG_DN14323_c0_g2_i1
542bp
FPKM:0.05 TPM:0.03
2444 A_BomoIG_DN14324_c0_g1_i1
612bp
FPKM:0.21 TPM:0.12
2445 A_BomoIG_DN14325_c0_g1_i1
248bp
FPKM:0.00 TPM:0.00
2446 A_BomoIG_DN14325_c0_g1_i2
388bp
FPKM:0.91 TPM:0.51
2447 A_BomoIG_DN14326_c0_g1_i1
513bp
 importin-13-like_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008139 F nuclear localization sequence binding
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0031965 C nuclear membrane
FPKM:0.22 TPM:0.12
2448 A_BomoIG_DN14326_c0_g1_i2
1880bp
 importin-13_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008139 F nuclear localization sequence binding
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0031965 C nuclear membrane
FPKM:1.04 TPM:0.58
2449 A_BomoIG_DN14327_c0_g1_i1
255bp
FPKM:0.38 TPM:0.21
2450 A_BomoIG_DN14328_c0_g1_i1
470bp
FPKM:1.71 TPM:0.95
2451 A_BomoIG_DN1432_c0_g1_i1
303bp
FPKM:0.13 TPM:0.07
2452 A_BomoIG_DN14330_c0_g1_i1
330bp
FPKM:0.55 TPM:0.31
2453 A_BomoIG_DN14330_c0_g2_i1
631bp
FPKM:0.16 TPM:0.09
2454 A_BomoIG_DN14331_c0_g1_i1
207bp
FPKM:0.34 TPM:0.19
2455 A_BomoIG_DN14332_c0_g1_i1
407bp
FPKM:0.15 TPM:0.09
2456 A_BomoIG_DN14334_c0_g1_i1
321bp
FPKM:1.04 TPM:0.58
2457 A_BomoIG_DN14336_c0_g1_i1
324bp
FPKM:0.11 TPM:0.06
2458 A_BomoIG_DN14337_c0_g1_i1
214bp
FPKM:0.31 TPM:0.17
2459 A_BomoIG_DN14338_c0_g1_i1
311bp
FPKM:0.00 TPM:0.00
2460 A_BomoIG_DN14340_c0_g1_i1
253bp
FPKM:0.19 TPM:0.11
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