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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
8551 A_BomoBR_DN23812_c0_g1_i1
500bp
 transposase_(clone_6.5)_-_almond_moth_transposon_mariner_(fragment)
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:0.00 TPM:0.00
8552 A_BomoBR_DN23812_c0_g2_i1
957bp
FPKM:0.00 TPM:0.00
8553 A_BomoBR_DN23814_c0_g1_i1
253bp
FPKM:0.00 TPM:0.00
8554 A_BomoBR_DN23816_c0_g1_i1
356bp
FPKM:0.00 TPM:0.00
8555 A_BomoBR_DN23817_c0_g1_i1
218bp
 PREDICTED:_uncharacterized_protein_LOC109166032_[Ipomoea_nil]
FPKM:0.00 TPM:0.00
8556 A_BomoBR_DN23817_c0_g2_i1
204bp
 Uncharacterized_protein_OBRU01_09374_[Operophtera_brumata]
FPKM:0.00 TPM:0.00
8557 A_BomoBR_DN23818_c0_g1_i1
737bp
FPKM:0.00 TPM:0.00
8558 A_BomoBR_DN23819_c0_g1_i1
232bp
FPKM:0.00 TPM:0.00
8559 A_BomoBR_DN23819_c0_g2_i1
315bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
8560 A_BomoBR_DN23821_c0_g1_i1
499bp
FPKM:0.00 TPM:0.00
8561 A_BomoBR_DN23823_c0_g1_i1
210bp
FPKM:0.00 TPM:0.00
8562 A_BomoBR_DN23824_c0_g1_i1
677bp
FPKM:0.00 TPM:0.00
8563 A_BomoBR_DN23825_c0_g1_i1
257bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
8564 A_BomoBR_DN23825_c0_g2_i1
257bp
FPKM:0.00 TPM:0.00
8565 A_BomoBR_DN23826_c0_g1_i1
1138bp
 syntaxin-18_[Bombyx_mori]
GO:0005484 F SNAP receptor activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0031201 C SNARE complex
GO:0061025 P membrane fusion
FPKM:0.00 TPM:0.00
8566 A_BomoBR_DN23826_c0_g2_i1
307bp
FPKM:0.00 TPM:0.00
8567 A_BomoBR_DN23828_c0_g1_i1
486bp
FPKM:0.00 TPM:0.00
8568 A_BomoBR_DN23828_c0_g2_i1
237bp
FPKM:0.00 TPM:0.00
8569 A_BomoBR_DN23830_c0_g1_i1
614bp
FPKM:0.00 TPM:0.00
8570 A_BomoBR_DN23830_c0_g1_i2
755bp
FPKM:0.00 TPM:0.00
8571 A_BomoBR_DN23832_c0_g1_i1
285bp
 fatty_acyl-CoA_reductase_wat_[Bombyx_mori]
FPKM:0.00 TPM:0.00
8572 A_BomoBR_DN23833_c0_g1_i1
311bp
FPKM:0.00 TPM:0.00
8573 A_BomoBR_DN23834_c0_g1_i1
353bp
FPKM:0.00 TPM:0.00
8574 A_BomoBR_DN23834_c0_g1_i2
1108bp
FPKM:0.00 TPM:0.00
8575 A_BomoBR_DN23834_c0_g1_i3
340bp
FPKM:0.00 TPM:0.00
8576 A_BomoBR_DN23835_c0_g1_i1
222bp
 uncharacterized_protein_LOC101740726_[Bombyx_mori]
FPKM:0.00 TPM:0.00
8577 A_BomoBR_DN23835_c0_g2_i1
219bp
FPKM:0.00 TPM:0.00
8578 A_BomoBR_DN23835_c0_g3_i1
249bp
 uncharacterized_protein_LOC101740726_[Bombyx_mori]
FPKM:0.00 TPM:0.00
8579 A_BomoBR_DN23836_c0_g1_i1
1459bp
FPKM:0.00 TPM:0.00
8580 A_BomoBR_DN23838_c0_g1_i1
233bp
FPKM:0.00 TPM:0.00
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