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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
8521 A_BomoBR_DN23787_c0_g1_i1
228bp
FPKM:0.00 TPM:0.00
8522 A_BomoBR_DN23789_c0_g1_i1
212bp
FPKM:0.00 TPM:0.00
8523 A_BomoBR_DN23790_c0_g1_i1
268bp
FPKM:0.00 TPM:0.00
8524 A_BomoBR_DN23792_c0_g1_i1
269bp
FPKM:0.00 TPM:0.00
8525 A_BomoBR_DN23793_c0_g1_i1
274bp
FPKM:0.00 TPM:0.00
8526 A_BomoBR_DN23793_c0_g2_i1
309bp
FPKM:0.00 TPM:0.00
8527 A_BomoBR_DN23795_c0_g1_i1
304bp
sodium-dependent_lysophosphatidylcholine_symporter_1-B-like_[Oncorhynchus_mykiss]
FPKM:0.00 TPM:0.00
8528 A_BomoBR_DN23796_c0_g1_i1
1515bp
 toll-like_receptor_6_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0005739 C mitochondrion
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007420 P brain development
GO:0008201 F heparin binding
GO:0016020 C membrane
GO:0021510 P spinal cord development
GO:0030154 P cell differentiation
GO:0035385 P Roundabout signaling pathway
GO:0048495 F Roundabout binding
GO:0048846 P axon extension involved in axon guidance
GO:0050770 P regulation of axonogenesis
FPKM:0.00 TPM:0.00
8529 A_BomoBR_DN23796_c0_g2_i1
1218bp
 toll-like_receptor_6_[Bombyx_mori]
GO:0001530 F lipopolysaccharide binding
GO:0002376 P immune system process
GO:0002718 P regulation of cytokine production involved in immune response
GO:0006954 P inflammatory response
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034142 P toll-like receptor 4 signaling pathway
GO:0045087 P innate immune response
GO:0046696 C lipopolysaccharide receptor complex
FPKM:0.00 TPM:0.00
8530 A_BomoBR_DN23798_c0_g1_i1
258bp
FPKM:0.00 TPM:0.00
8531 A_BomoBR_DN2379_c0_g1_i1
269bp
FPKM:0.00 TPM:0.00
8532 A_BomoBR_DN23800_c0_g1_i1
389bp
FPKM:0.00 TPM:0.00
8533 A_BomoBR_DN23800_c0_g1_i2
657bp
FPKM:0.00 TPM:0.00
8534 A_BomoBR_DN23800_c0_g1_i3
333bp
FPKM:0.00 TPM:0.00
8535 A_BomoBR_DN23801_c0_g1_i1
338bp
FPKM:0.00 TPM:0.00
8536 A_BomoBR_DN23801_c0_g1_i2
530bp
 Histone-lysine_N-methyltransferase_SETMAR_[Ooceraea_biroi]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:0.00 TPM:0.00
8537 A_BomoBR_DN23801_c0_g1_i3
282bp
 meiosis-specific_with_OB_domain-containing_protein_isoform_X1_[Bombyx_mori]
FPKM:0.00 TPM:0.00
8538 A_BomoBR_DN23801_c0_g1_i4
555bp
 Histone-lysine_N-methyltransferase_SETMAR_[Ooceraea_biroi]
FPKM:0.00 TPM:0.00
8539 A_BomoBR_DN23802_c0_g1_i1
456bp
 multidrug_resistance-associated_protein_4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002576 P platelet degranulation
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0015662 F P-type ion transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016404 F 15-hydroxyprostaglandin dehydrogenase (NAD+) activity
GO:0016887 F ATP hydrolysis activity
GO:0031088 C platelet dense granule membrane
GO:0032310 P prostaglandin secretion
GO:0034220 P ion transmembrane transport
GO:0042384 P cilium assembly
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043225 F ATPase-coupled inorganic anion transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0055114 P obsolete oxidation-reduction process
GO:0098656 P anion transmembrane transport
FPKM:0.00 TPM:0.00
8540 A_BomoBR_DN23804_c0_g1_i1
1136bp
FPKM:0.00 TPM:0.00
8541 A_BomoBR_DN23804_c1_g1_i1
218bp
FPKM:0.00 TPM:0.00
8542 A_BomoBR_DN23805_c0_g1_i1
208bp
 Rh-like_protein_[Bombyx_mori]
FPKM:0.00 TPM:0.00
8543 A_BomoBR_DN23806_c0_g1_i1
513bp
FPKM:0.00 TPM:0.00
8544 A_BomoBR_DN23807_c0_g1_i1
224bp
FPKM:0.00 TPM:0.00
8545 A_BomoBR_DN23807_c0_g2_i1
385bp
FPKM:0.00 TPM:0.00
8546 A_BomoBR_DN23808_c0_g1_i1
804bp
FPKM:0.00 TPM:0.00
8547 A_BomoBR_DN23809_c0_g1_i1
214bp
FPKM:0.00 TPM:0.00
8548 A_BomoBR_DN23810_c0_g1_i1
2870bp
 cytoplasmic_dynein_2_heavy_chain_1_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005868 C cytoplasmic dynein complex
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0007018 P microtubule-based movement
GO:0007030 P Golgi organization
GO:0007275 P multicellular organism development
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0008105 P protein localization
GO:0009953 P dorsal/ventral pattern formation
GO:0016020 C membrane
GO:0016485 P protein processing
GO:0016887 F ATP hydrolysis activity
GO:0021522 P spinal cord motor neuron differentiation
GO:0030030 P cell projection organization
GO:0030182 P neuron differentiation
GO:0030286 C dynein complex
GO:0030326 P embryonic limb morphogenesis
GO:0030900 P forebrain development
GO:0031512 C motile cilium
GO:0035721 P intraciliary retrograde transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0045177 C apical part of cell
GO:0045880 P positive regulation of smoothened signaling pathway
GO:0060271 P cilium assembly
GO:0060976 P coronary vasculature development
GO:0070062 C extracellular exosome
FPKM:0.00 TPM:0.00
8549 A_BomoBR_DN23810_c0_g1_i2
1471bp
 cytoplasmic_dynein_2_heavy_chain_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0007018 P microtubule-based movement
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0030030 P cell projection organization
GO:0030286 C dynein complex
GO:0042995 C cell projection
GO:0051959 F dynein light intermediate chain binding
FPKM:0.00 TPM:0.00
8550 A_BomoBR_DN23811_c0_g1_i1
205bp
FPKM:0.00 TPM:0.00
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