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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
301 A_BomoBR_DN10496_c0_g1_i1
213bp
FPKM:0.00 TPM:0.00
302 A_BomoBR_DN10497_c0_g1_i1
467bp
FPKM:0.00 TPM:0.00
303 A_BomoBR_DN104_c0_g1_i1
559bp
FPKM:0.00 TPM:0.00
304 A_BomoBR_DN10500_c0_g1_i1
292bp
 LOW_QUALITY_PROTEIN:_histone_deacetylase_4_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001975 P response to amphetamine
GO:0003714 F transcription corepressor activity
GO:0004407 F histone deacetylase activity
GO:0005080 F protein kinase C binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006954 P inflammatory response
GO:0007507 P heart development
GO:0008134 F transcription factor binding
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0030182 P neuron differentiation
GO:0030183 P B cell differentiation
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0032869 P cellular response to insulin stimulus
GO:0033558 F protein deacetylase activity
GO:0034983 P peptidyl-lysine deacetylation
GO:0035097 C histone methyltransferase complex
GO:0042113 P B cell activation
GO:0042826 F histone deacetylase binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048742 P regulation of skeletal muscle fiber development
GO:0051153 P regulation of striated muscle cell differentiation
GO:0070491 F DNA-binding transcription factor binding
GO:0070932 P histone H3 deacetylation
GO:0070933 P histone H4 deacetylation
GO:0090050 P positive regulation of cell migration involved in sprouting angiogenesis
FPKM:0.00 TPM:0.00
305 A_BomoBR_DN10505_c0_g1_i1
467bp
FPKM:0.00 TPM:0.00
306 A_BomoBR_DN10505_c0_g1_i2
553bp
FPKM:0.00 TPM:0.00
307 A_BomoBR_DN10507_c0_g1_i1
683bp
FPKM:0.00 TPM:0.00
308 A_BomoBR_DN10509_c0_g1_i1
690bp
FPKM:0.00 TPM:0.00
309 A_BomoBR_DN1050_c0_g1_i1
615bp
FPKM:0.00 TPM:0.00
310 A_BomoBR_DN10510_c0_g1_i1
258bp
FPKM:0.00 TPM:0.00
311 A_BomoBR_DN10511_c0_g1_i1
202bp
FPKM:0.00 TPM:0.00
312 A_BomoBR_DN10512_c0_g1_i1
353bp
FPKM:0.00 TPM:0.00
313 A_BomoBR_DN10514_c0_g1_i1
239bp
FPKM:0.00 TPM:0.00
314 A_BomoBR_DN10516_c0_g1_i1
283bp
FPKM:0.00 TPM:0.00
315 A_BomoBR_DN10517_c0_g1_i1
270bp
FPKM:0.00 TPM:0.00
316 A_BomoBR_DN10518_c0_g1_i1
420bp
FPKM:0.00 TPM:0.00
317 A_BomoBR_DN10519_c0_g1_i1
224bp
FPKM:0.00 TPM:0.00
318 A_BomoBR_DN10520_c0_g1_i1
291bp
FPKM:0.00 TPM:0.00
319 A_BomoBR_DN10521_c0_g1_i1
338bp
FPKM:0.00 TPM:0.00
320 A_BomoBR_DN10522_c0_g1_i1
671bp
 titin1_[Bombyx_mori]
GO:0000794 C condensed nuclear chromosome
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005863 C striated muscle myosin thick filament
GO:0005875 C microtubule associated complex
GO:0007049 P cell cycle
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0007519 P skeletal muscle tissue development
GO:0007520 P myoblast fusion
GO:0007522 P visceral muscle development
GO:0007525 P somatic muscle development
GO:0008307 F structural constituent of muscle
GO:0016203 P muscle attachment
GO:0019233 P sensory perception of pain
GO:0030017 C sarcomere
GO:0030018 C Z disc
GO:0031674 C I band
GO:0035206 P regulation of hemocyte proliferation
GO:0040011 P locomotion
GO:0045214 P sarcomere organization
GO:0051301 P cell division
FPKM:0.00 TPM:0.00
321 A_BomoBR_DN10530_c0_g1_i1
490bp
 uncharacterized_protein_LOC101737302_[Bombyx_mori]
FPKM:0.00 TPM:0.00
322 A_BomoBR_DN10530_c0_g2_i1
227bp
 uncharacterized_protein_LOC101737302_[Bombyx_mori]
FPKM:0.00 TPM:0.00
323 A_BomoBR_DN10532_c0_g1_i1
263bp
FPKM:0.00 TPM:0.00
324 A_BomoBR_DN10533_c0_g1_i1
282bp
FPKM:0.00 TPM:0.00
325 A_BomoBR_DN10537_c0_g1_i1
230bp
FPKM:0.00 TPM:0.00
326 A_BomoBR_DN10543_c0_g1_i1
453bp
FPKM:0.00 TPM:0.00
327 A_BomoBR_DN10544_c0_g1_i1
214bp
FPKM:0.00 TPM:0.00
328 A_BomoBR_DN10544_c0_g2_i1
243bp
FPKM:0.00 TPM:0.00
329 A_BomoBR_DN10545_c0_g1_i1
222bp
FPKM:0.00 TPM:0.00
330 A_BomoBR_DN10547_c0_g1_i1
249bp
FPKM:0.00 TPM:0.00
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