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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
781 A_BomaASG_c11242_g1_i1
237bp
FPKM:3.24 TPM:2.54
782 A_BomaASG_c11244_g1_i1
453bp
uncharacterized_protein_LOC101735788_[Bombyx_mori]
FPKM:5.30 TPM:4.15
783 A_BomaASG_c11246_g1_i1
259bp
histone-lysine_N-methyltransferase_SETMAR-like_[Bombyx_mori]
FPKM:4.14 TPM:3.24
784 A_BomaASG_c1124_g1_i1
394bp
PREDICTED:_uncharacterized_protein_LOC106718269_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0015074 P DNA integration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:2.05 TPM:1.60
785 A_BomaASG_c11250_g1_i1
278bp
FPKM:1.32 TPM:1.03
786 A_BomaASG_c11251_g1_i1
296bp
FPKM:3.08 TPM:2.41
787 A_BomaASG_c11252_g1_i1
268bp
FPKM:3.82 TPM:2.99
788 A_BomaASG_c11253_g1_i1
207bp
FPKM:3.86 TPM:3.02
789 A_BomaASG_c11255_g1_i1
217bp
FPKM:3.33 TPM:2.61
790 A_BomaASG_c11257_g1_i1
223bp
hypothetical_protein_RF55_12857_[Lasius_niger]
FPKM:3.07 TPM:2.40
791 A_BomaASG_c1125_g1_i1
213bp
histone-lysine_N-methyltransferase_SETMAR-like_[Bombyx_mori]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:0.88 TPM:0.69
792 A_BomaASG_c11260_g1_i1
231bp
FPKM:0.69 TPM:0.54
793 A_BomaASG_c11261_g1_i1
316bp
FPKM:1.35 TPM:1.06
794 A_BomaASG_c11264_g1_i1
321bp
FPKM:1.64 TPM:1.28
795 A_BomaASG_c11265_g1_i1
244bp
FPKM:3.60 TPM:2.82
796 A_BomaASG_c11266_g1_i1
214bp
putative_glycerol_kinase_5_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
FPKM:0.87 TPM:0.68
797 A_BomaASG_c11268_g1_i1
378bp
XK-related_protein_6_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:2.20 TPM:1.72
798 A_BomaASG_c1126_g1_i1
298bp
serine/threonine-protein_kinase_ATR_[Bombyx_mori]
GO:0000076 P DNA replication checkpoint signaling
GO:0000077 P DNA damage checkpoint signaling
GO:0000166 F nucleotide binding
GO:0000706 P meiotic DNA double-strand break processing
GO:0000723 P telomere maintenance
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003677 F DNA binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007015 P actin filament organization
GO:0007088 P regulation of mitotic nuclear division
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007126 P meiotic cell cycle
GO:0007131 P reciprocal meiotic recombination
GO:0007275 P multicellular organism development
GO:0007348 P regulation of syncytial blastoderm mitotic cell cycle
GO:0007349 P cellularization
GO:0007444 P imaginal disc development
GO:0008360 P regulation of cell shape
GO:0009314 P response to radiation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016321 P female meiosis chromosome segregation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0018105 P peptidyl-serine phosphorylation
GO:0030261 P chromosome condensation
GO:0031000 P response to caffeine
GO:0033314 P mitotic DNA replication checkpoint signaling
GO:0045002 P double-strand break repair via single-strand annealing
GO:0045003 P double-strand break repair via synthesis-dependent strand annealing
GO:0048477 P oogenesis
FPKM:2.66 TPM:2.08
799 A_BomaASG_c11273_g1_i1
221bp
FPKM:4.73 TPM:3.70
800 A_BomaASG_c11275_g1_i1
250bp
FPKM:2.26 TPM:1.77
801 A_BomaASG_c11280_g1_i1
287bp
FPKM:3.29 TPM:2.57
802 A_BomaASG_c11282_g1_i1
287bp
midasin_isoform_X1_[Bombyx_mori]
GO:0000027 P ribosomal large subunit assembly
GO:0000166 F nucleotide binding
GO:0005509 F calcium ion binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006364 P rRNA processing
GO:0016887 F ATP hydrolysis activity
GO:0044732 C mitotic spindle pole body
FPKM:0.52 TPM:0.41
803 A_BomaASG_c11282_g1_i2
406bp
midasin_isoform_X1_[Bombyx_mori]
GO:0000027 P ribosomal large subunit assembly
GO:0000166 F nucleotide binding
GO:0005509 F calcium ion binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006364 P rRNA processing
GO:0016887 F ATP hydrolysis activity
GO:0044732 C mitotic spindle pole body
FPKM:0.81 TPM:0.63
804 A_BomaASG_c11286_g1_i1
207bp
N-acetylneuraminate_lyase_isoform_X1_[Bombyx_mori]
FPKM:2.90 TPM:2.27
805 A_BomaASG_c11287_g1_i1
345bp
FPKM:6.30 TPM:4.93
806 A_BomaASG_c11289_g1_i1
203bp
uncharacterized_protein_LOC110386883_[Bombyx_mori]
FPKM:0.00 TPM:0.00
807 A_BomaASG_c11290_g1_i1
768bp
protein_NDRG3_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0070062 C extracellular exosome
FPKM:2.31 TPM:1.81
808 A_BomaASG_c11293_g1_i1
212bp
myrosinase_1_[Bombyx_mori]
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0019137 F thioglucosidase activity
GO:0046872 F metal ion binding
FPKM:0.89 TPM:0.70
809 A_BomaASG_c11298_g1_i1
279bp
FPKM:3.93 TPM:3.08
810 A_BomaASG_c11301_g1_i1
328bp
PREDICTED:_uncharacterized_protein_K02A2.6-like_[Plutella_xylostella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:3.14 TPM:2.46
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