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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
751 A_BomaASG_c11187_g1_i1
220bp
Tigger_transposable_element-derived_protein_[Operophtera_brumata]
FPKM:1.60 TPM:1.25
752 A_BomaASG_c11189_g1_i1
224bp
FPKM:5.31 TPM:4.15
753 A_BomaASG_c1118_g1_i1
409bp
uncharacterized_protein_LOC101746669_[Bombyx_mori]
FPKM:9.43 TPM:7.38
754 A_BomaASG_c11192_g1_i1
315bp
hypothetical_protein_[Acinetobacter_baumannii]
FPKM:5.77 TPM:4.52
755 A_BomaASG_c11199_g1_i1
241bp
FPKM:6.20 TPM:4.85
756 A_BomaASG_c1119_g1_i1
275bp
FPKM:3.61 TPM:2.82
757 A_BomaASG_c111_g1_i1
313bp
FPKM:2.75 TPM:2.15
758 A_BomaASG_c11200_g1_i1
347bp
FPKM:1.70 TPM:1.33
759 A_BomaASG_c11201_g1_i1
219bp
FPKM:4.05 TPM:3.17
760 A_BomaASG_c11204_g1_i1
258bp
FPKM:1.05 TPM:0.82
761 A_BomaASG_c11206_g1_i1
460bp
DNA_polymerase_theta_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006302 P double-strand break repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016446 P somatic hypermutation of immunoglobulin genes
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0043142 F single-stranded DNA helicase activity
GO:0051260 P protein homooligomerization
GO:0051575 F 5'-deoxyribose-5-phosphate lyase activity
GO:0071897 P DNA biosynthetic process
GO:0097681 P double-strand break repair via alternative nonhomologous end joining
GO:2000042 P negative regulation of double-strand break repair via homologous recombination
FPKM:4.82 TPM:3.77
762 A_BomaASG_c11207_g1_i1
239bp
FPKM:1.90 TPM:1.49
763 A_BomaASG_c11211_g1_i1
432bp
FPKM:2.36 TPM:1.85
764 A_BomaASG_c11213_g1_i1
279bp
CTL-like_protein_2_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:5.24 TPM:4.10
765 A_BomaASG_c11215_g1_i1
534bp
PREDICTED:_uncharacterized_protein_LOC105456676_[Wasmannia_auropunctata]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0030430 C host cell cytoplasm
GO:0042025 C host cell nucleus
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0075713 P establishment of integrated proviral latency
GO:0075732 P viral penetration into host nucleus
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:1.44 TPM:1.13
766 A_BomaASG_c11217_g1_i1
211bp
FPKM:2.73 TPM:2.13
767 A_BomaASG_c11218_g1_i1
249bp
DDB1-_and_CUL4-associated_factor_10_isoform_X1_[Bombyx_mori]
FPKM:2.28 TPM:1.78
768 A_BomaASG_c11220_g1_i1
224bp
FPKM:2.27 TPM:1.78
769 A_BomaASG_c11225_g1_i1
356bp
FPKM:1.62 TPM:1.27
770 A_BomaASG_c11226_g1_i1
203bp
FPKM:2.06 TPM:1.61
771 A_BomaASG_c11229_g1_i1
286bp
FPKM:1.66 TPM:1.30
772 A_BomaASG_c1122_g1_i1
431bp
PREDICTED:_uncharacterized_protein_LOC106141127_[Amyelois_transitella]
FPKM:1.38 TPM:1.08
773 A_BomaASG_c11232_g1_i1
203bp
FPKM:2.06 TPM:1.61
774 A_BomaASG_c11235_g1_i1
595bp
signal_recognition_particle_14_kDa_protein-like_protein_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005786 C signal recognition particle, endoplasmic reticulum targeting
GO:0006614 P SRP-dependent cotranslational protein targeting to membrane
GO:0008312 F 7S RNA binding
GO:0030529 C ribonucleoprotein complex
GO:0030942 F endoplasmic reticulum signal peptide binding
GO:0042493 P response to xenobiotic stimulus
GO:0044822 F RNA binding
GO:0045047 P protein targeting to ER
GO:0048500 C signal recognition particle
GO:0070062 C extracellular exosome
FPKM:26.76 TPM:20.94
775 A_BomaASG_c11238_g1_i1
611bp
hypothetical_protein_RR46_09115_[Papilio_xuthus]
FPKM:2.75 TPM:2.15
776 A_BomaASG_c11239_g1_i1
278bp
FPKM:5.72 TPM:4.48
777 A_BomaASG_c1123_g1_i1
366bp
uncharacterized_protein_LOC101744858_isoform_X2_[Bombyx_mori]
FPKM:2.06 TPM:1.61
778 A_BomaASG_c11240_g1_i1
283bp
PREDICTED:_uncharacterized_protein_LOC106710659_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:4.23 TPM:3.31
779 A_BomaASG_c11241_g1_i1
453bp
spectrin_beta_chain_[Bombyx_mori]
FPKM:0.00 TPM:0.00
780 A_BomaASG_c11241_g1_i2
959bp
FPKM:2.51 TPM:1.96
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