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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
571 A_BomaASG_c1088_g1_i1
206bp
FPKM:3.93 TPM:3.07
572 A_BomaASG_c10892_g1_i1
216bp
toll-like_receptor_7_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0007268 P chemical synaptic transmission
GO:0007409 P axonogenesis
GO:0009986 C cell surface
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
FPKM:3.38 TPM:2.64
573 A_BomaASG_c10893_g1_i1
608bp
FPKM:2.65 TPM:2.07
574 A_BomaASG_c10894_g1_i1
532bp
cytochrome_P450,_partial_[Bombyx_mori]
FPKM:1.01 TPM:0.79
575 A_BomaASG_c10896_g1_i1
369bp
anoctamin-4_isoform_X2_[Bombyx_mori]
FPKM:2.03 TPM:1.59
576 A_BomaASG_c10897_g1_i1
290bp
hypothetical_protein_RR48_15489_[Papilio_machaon]
FPKM:1.61 TPM:1.26
577 A_BomaASG_c10898_g1_i1
208bp
nesprin-1_isoform_X2_[Bombyx_mori]
FPKM:4.76 TPM:3.72
578 A_BomaASG_c1089_g1_i1
347bp
ATP-dependent_RNA_helicase_SUV3_homolog,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000963 P mitochondrial RNA processing
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006119 P oxidative phosphorylation
GO:0016787 F hydrolase activity
GO:0016817 F hydrolase activity, acting on acid anhydrides
GO:0022904 P respiratory electron transport chain
GO:0032508 P DNA duplex unwinding
GO:0044528 P regulation of mitochondrial mRNA stability
GO:0070131 P positive regulation of mitochondrial translation
GO:0090646 P mitochondrial tRNA processing
GO:0097222 P mitochondrial mRNA polyadenylation
FPKM:1.98 TPM:1.55
579 A_BomaASG_c108_g1_i1
249bp
FPKM:1.14 TPM:0.89
580 A_BomaASG_c10901_g1_i1
269bp
FPKM:3.32 TPM:2.60
581 A_BomaASG_c10905_g1_i1
253bp
FPKM:2.19 TPM:1.72
582 A_BomaASG_c10908_g1_i1
352bp
succinate_dehydrogenase_assembly_factor_3,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006105 P succinate metabolic process
GO:0006979 P response to oxidative stress
GO:0050881 P musculoskeletal movement
GO:0055093 P response to hyperoxia
FPKM:1.66 TPM:1.30
583 A_BomaASG_c10909_g1_i1
330bp
FPKM:1.55 TPM:1.22
584 A_BomaASG_c1090_g1_i1
213bp
FPKM:0.88 TPM:0.69
585 A_BomaASG_c10914_g1_i1
238bp
glucose_dehydrogenase_[FAD,_quinone]-like_[Bombyx_mori]
GO:0004344 F glucose dehydrogenase activity
GO:0005576 C extracellular region
GO:0006006 P glucose metabolic process
GO:0008364 P pupal chitin-based cuticle development
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0019233 P sensory perception of pain
GO:0042335 P cuticle development
GO:0046693 P sperm storage
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:1.92 TPM:1.50
586 A_BomaASG_c10915_g1_i1
217bp
FPKM:0.83 TPM:0.65
587 A_BomaASG_c10917_g1_i1
211bp
PREDICTED:_uncharacterized_protein_LOC106138849_[Amyelois_transitella]
FPKM:0.91 TPM:0.71
588 A_BomaASG_c10920_g1_i1
347bp
FPKM:1.42 TPM:1.11
589 A_BomaASG_c10922_g1_i1
355bp
TRAS3_protein_[Danaus_plexippus_plexippus]
FPKM:1.63 TPM:1.28
590 A_BomaASG_c10928_g1_i1
232bp
FPKM:0.86 TPM:0.67
591 A_BomaASG_c10928_g1_i2
207bp
FPKM:2.66 TPM:2.08
592 A_BomaASG_c1092_g1_i1
236bp
FPKM:3.28 TPM:2.56
593 A_BomaASG_c10930_g1_i1
232bp
FPKM:2.75 TPM:2.15
594 A_BomaASG_c10932_g1_i1
244bp
FPKM:2.40 TPM:1.88
595 A_BomaASG_c10933_g1_i1
310bp
FPKM:0.35 TPM:0.27
596 A_BomaASG_c10936_g1_i1
275bp
FPKM:1.80 TPM:1.41
597 A_BomaASG_c10938_g1_i1
1489bp
interleukin_enhancer_binding_factor_isoform_X1_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006955 P immune response
GO:0016740 F transferase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
FPKM:23.69 TPM:18.54
598 A_BomaASG_c10939_g1_i1
208bp
MAGUK_p55_subfamily_member_7_[Bombyx_mori]
GO:0001841 P neural tube formation
GO:0001917 C photoreceptor inner segment
GO:0002011 P morphogenesis of an epithelial sheet
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0005923 C bicellular tight junction
GO:0007420 P brain development
GO:0008078 P mesodermal cell migration
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016337 P cell-cell adhesion
GO:0021744 P dorsal motor nucleus of vagus nerve development
GO:0030054 C cell junction
GO:0031226 C intrinsic component of plasma membrane
GO:0035050 P embryonic heart tube development
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0043296 C apical junction complex
GO:0045176 P apical protein localization
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045199 P maintenance of epithelial cell apical/basal polarity
GO:0048699 P generation of neurons
GO:0055008 P cardiac muscle tissue morphogenesis
GO:0060041 P retina development in camera-type eye
GO:0060042 P retina morphogenesis in camera-type eye
GO:0060059 P embryonic retina morphogenesis in camera-type eye
GO:0070830 P bicellular tight junction assembly
GO:0090162 P establishment of epithelial cell polarity
FPKM:1.90 TPM:1.49
599 A_BomaASG_c10943_g1_i1
328bp
FPKM:1.57 TPM:1.23
600 A_BomaASG_c10947_g1_i1
360bp
FPKM:4.78 TPM:3.74
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