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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaASG_c10938_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		interleukin_enhancer_binding_factor_isoform_X1_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006955 P immune response
GO:0016740 F transferase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:23.69 TPM:18.54
ORF EntryO_BomaASG1538_complete:A_BomaASG_c10938_g1_i1
Sequence
(Nucleotide)
GTGAACAAGCGGAAAAGAAGAAAATTATAACCTACAAAAATCTGACAAATCTGCCATATT
GGAAATTTGTTATGATTTGACCGATTGAGACCGCAGAAAGTGTCCGATTAATACAATTCG
AACACTATATAAGCTCGCGCGTAAAAATAATTAAAGAAAAATTAGTGAAAACACAACTTC
TATGTCATTAACATTCCAAGTGCAAAACAAAGTGAAAACGTTAACCTAAAGTAAATTGTT
TTTCCTGAAATGGTGCGCGGCATCGGTCGTGGTGGACGCGGTATCCCCGGCCGGGGCGGG
ATGGGGCGTCCACCCTTCAACAGACCCCGAGTCTTGATGCTTCGTCCGCCCTTCGACCTT
TTATTAGCAGAACCCGCTTTTCCTAGATGCAAACCGGCTCCCGACGACTCCGTGCTCACT
CAGGCCCTTCTAAAGAGGCACACGGAGCTATGTCCGTCACCTACCGATCAAGCAGCTGTT
TTGAGCCTCGTCACGAAACTGCAGACAGTATTGGACAATATTGTTGTGGCTCCGGGAGAA
TTTGCAGCCTGCCAACTAGAAGAAGTGCGGCAAGTTGGGTCCTACAAGAAGGGGACAATG
ATGGCCGGGAAGAACGTTGCTGATATCGTGGTCATCATGAAAACCTTGCCAACGAAAGAG
GCTGTCGAGGGACTCTCCAATAAGGTTAACGAGGAGGTGAACAAGCTGATGAAGGCTGAA
GGCAGCGGTGCAGTGGTGAGCGCGTGTCACGAGCGCGGCTTCACTGTCACCGGGACCTCC
GCAGCCGTCAGGGTCCTCATCACAACACTGCATCAGAACTTAAGGAAGATAGAGCCTGAT
GTACATCTAGACTATAAAGTGATAAGCAGTCATCTAGCAGCGATAAGACACAGTCGCTGG
TTTGAAGAGAACGCCCATCATTCATCAATTAAAGTATTGATCCGTCTTCTCCGGGACATG
TGCTCTCGGCACTCCGGACTCGAACCCCTGACGCCGTGGATGATAGATCTGCTCGCGCAC
CACTGCATCATGAACAACCCTCAGCGTCAGGCCTTACCCATCAACGTGGCATTCCGCCGC
GCGTTGTCCCTGATGGCGGGCGGGTTGTTCCTGCCGGGCTGCGCGGGGCTGCCGGACCCG
TGCGAGGCGGCGCACTCCCGCGCACACACCGCGCTCGACCTCGCCGCGCAGGACCTCGCC
GCCGCCACCGCGCAGACGTTGCTGCGCGTGGTGGCGCGCGGGGGTCACCTGTACGTCCTG
GGCTTGCAGCCGTTCGAGGGCGGCAAGGACATATCCCTGGAGATCACAGTGTGGGACGGC
GTGGTGGTCTCCCCGCTGGCGCCCGCCTACAACGACTCCCCGGAGCCCATGGACACGGAC
GACAAAGAAGAAGAGTCACAAGACAGTGTCGCGGCTTAAGATCTAACTTGAGAAATTACT
TATAAGACTTTGATAAAATTAATAAAGATTTCTTTATAAAAAAAAAAAA
(1489 bp)

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