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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
331 A_BomaASG_c10475_g1_i1
232bp
FPKM:0.69 TPM:0.54
332 A_BomaASG_c10476_g1_i1
294bp
FPKM:2.34 TPM:1.83
333 A_BomaASG_c10479_g1_i1
356bp
Dystrophin_[Operophtera_brumata]
FPKM:11.64 TPM:9.11
334 A_BomaASG_c1047_g1_i1
241bp
regulator_of_telomere_elongation_helicase_1_homolog_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000723 P telomere maintenance
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0008026 F helicase activity
GO:0010569 P regulation of double-strand break repair via homologous recombination
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0032508 P DNA duplex unwinding
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
FPKM:1.86 TPM:1.46
335 A_BomaASG_c10480_g1_i1
273bp
FPKM:1.83 TPM:1.43
336 A_BomaASG_c10481_g1_i1
280bp
reverse_transcriptase,_partial_[Bombyx_mori]
FPKM:2.17 TPM:1.70
337 A_BomaASG_c10483_g1_i1
260bp
probable_serine/threonine-protein_kinase_DDB_G0278901_isoform_X2_[Bombyx_mori]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0000307 C cyclin-dependent protein kinase holoenzyme complex
GO:0000785 C chromatin
GO:0002088 P lens development in camera-type eye
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005923 C bicellular tight junction
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007165 P signal transduction
GO:0007623 P circadian rhythm
GO:0008284 P positive regulation of cell population proliferation
GO:0009636 P response to toxic substance
GO:0010033 P response to organic substance
GO:0010288 P response to lead ion
GO:0010468 P regulation of gene expression
GO:0010971 P positive regulation of G2/M transition of mitotic cell cycle
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030332 F cyclin binding
GO:0031100 P animal organ regeneration
GO:0031965 C nuclear membrane
GO:0032403 F protein-containing complex binding
GO:0033574 P response to testosterone
GO:0042127 P regulation of cell population proliferation
GO:0042493 P response to xenobiotic stimulus
GO:0043065 P positive regulation of apoptotic process
GO:0045727 P positive regulation of translation
GO:0045793 P positive regulation of cell size
GO:0048146 P positive regulation of fibroblast proliferation
GO:0048471 C perinuclear region of cytoplasm
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
GO:0055093 P response to hyperoxia
GO:0071157 P regulation of cell cycle
FPKM:3.08 TPM:2.41
338 A_BomaASG_c10483_g1_i2
214bp
probable_serine/threonine-protein_kinase_DDB_G0278901_isoform_X2_[Bombyx_mori]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0000307 C cyclin-dependent protein kinase holoenzyme complex
GO:0000785 C chromatin
GO:0002088 P lens development in camera-type eye
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005923 C bicellular tight junction
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007165 P signal transduction
GO:0007623 P circadian rhythm
GO:0008284 P positive regulation of cell population proliferation
GO:0009636 P response to toxic substance
GO:0010033 P response to organic substance
GO:0010288 P response to lead ion
GO:0010468 P regulation of gene expression
GO:0010971 P positive regulation of G2/M transition of mitotic cell cycle
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030332 F cyclin binding
GO:0031100 P animal organ regeneration
GO:0031965 C nuclear membrane
GO:0032403 F protein-containing complex binding
GO:0033574 P response to testosterone
GO:0042127 P regulation of cell population proliferation
GO:0042493 P response to xenobiotic stimulus
GO:0043065 P positive regulation of apoptotic process
GO:0045727 P positive regulation of translation
GO:0045793 P positive regulation of cell size
GO:0048146 P positive regulation of fibroblast proliferation
GO:0048471 C perinuclear region of cytoplasm
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
GO:0055093 P response to hyperoxia
GO:0071157 P regulation of cell cycle
FPKM:0.00 TPM:0.00
339 A_BomaASG_c10485_g1_i1
256bp
FPKM:0.00 TPM:0.00
340 A_BomaASG_c10487_g1_i1
304bp
FPKM:7.29 TPM:5.70
341 A_BomaASG_c10489_g1_i1
296bp
FPKM:1.54 TPM:1.20
342 A_BomaASG_c1048_g1_i1
322bp
alpha-(1,3)-fucosyltransferase_7-like_[Bombyx_mori]
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0008417 F fucosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0017060 F 3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase activity
GO:0032580 C Golgi cisterna membrane
GO:0036065 P fucosylation
FPKM:5.21 TPM:4.08
343 A_BomaASG_c10498_g1_i1
254bp
Transposable_element_Tcb1_transposase,_partial_[Stegodyphus_mimosarum]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
FPKM:1.63 TPM:1.27
344 A_BomaASG_c1049_g1_i1
208bp
uncharacterized_protein_LOC101746638_isoform_X2_[Bombyx_mori]
FPKM:4.76 TPM:3.72
345 A_BomaASG_c104_g1_i1
213bp
FPKM:2.65 TPM:2.07
346 A_BomaASG_c10500_g1_i1
226bp
putative_pol_protein_[Danaus_plexippus_plexippus]
FPKM:2.22 TPM:1.73
347 A_BomaASG_c10501_g1_i1
965bp
FPKM:57.11 TPM:44.69
348 A_BomaASG_c10502_g1_i1
372bp
GTPase-activating_protein_CdGAPr_[Bombyx_mori]
FPKM:2.26 TPM:1.77
349 A_BomaASG_c10504_g1_i1
204bp
FPKM:4.06 TPM:3.17
350 A_BomaASG_c10507_g1_i1
246bp
FPKM:12.35 TPM:9.66
351 A_BomaASG_c10508_g1_i1
410bp
FPKM:1.57 TPM:1.23
352 A_BomaASG_c10508_g1_i2
281bp
FPKM:31.66 TPM:24.78
353 A_BomaASG_c10509_g1_i1
399bp
FPKM:2.68 TPM:2.10
354 A_BomaASG_c1050_g1_i1
270bp
FPKM:1.88 TPM:1.47
355 A_BomaASG_c10510_g1_i1
295bp
FPKM:5.43 TPM:4.25
356 A_BomaASG_c10514_g1_i1
291bp
FPKM:1.20 TPM:0.94
357 A_BomaASG_c10515_g1_i1
233bp
FPKM:2.71 TPM:2.12
358 A_BomaASG_c10516_g1_i1
222bp
FPKM:0.78 TPM:0.61
359 A_BomaASG_c10519_g1_i1
304bp
FPKM:6.93 TPM:5.42
360 A_BomaASG_c1051_g1_i1
884bp
N-acetylglucosaminyl-phosphatidylinositol_de-N-acetylase_[Bombyx_mori]
GO:0000225 F N-acetylglucosaminylphosphatidylinositol deacetylase activity
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
FPKM:3.07 TPM:2.40
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