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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2101 A_BomaASG_c13142_g1_i1
606bp
uncharacterized_protein_LOC101743114_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0016568 P chromatin organization
GO:0016589 C NURF complex
GO:0071339 C MLL1 complex
FPKM:17.29 TPM:13.53
2102 A_BomaASG_c13143_g1_i1
230bp
FPKM:6.33 TPM:4.95
2103 A_BomaASG_c13145_g1_i1
249bp
FPKM:5.70 TPM:4.46
2104 A_BomaASG_c13146_g1_i1
312bp
FPKM:4.15 TPM:3.25
2105 A_BomaASG_c13147_g1_i1
715bp
FPKM:37.88 TPM:29.64
2106 A_BomaASG_c13148_g1_i1
898bp
LIM_domain_kinase_1_[Bombyx_mori]
FPKM:2.64 TPM:2.07
2107 A_BomaASG_c13149_g1_i1
303bp
hypothetical_protein_KGM_208533_[Danaus_plexippus_plexippus]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:0.16 TPM:0.13
2108 A_BomaASG_c13149_g1_i2
457bp
gag-pol_polyprotein,_partial_[Lasius_niger]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:2.45 TPM:1.91
2109 A_BomaASG_c13150_g1_i1
236bp
FPKM:3.28 TPM:2.56
2110 A_BomaASG_c13151_g1_i1
298bp
E3_ubiquitin-protein_ligase_MYCBP2_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008045 P motor neuron axon guidance
GO:0008270 F zinc ion binding
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0021785 P branchiomotor neuron axon guidance
GO:0021952 P central nervous system projection neuron axonogenesis
GO:0030424 C axon
GO:0032880 P regulation of protein localization
GO:0042177 P negative regulation of protein catabolic process
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0048667 P cell morphogenesis involved in neuron differentiation
GO:0051493 P regulation of cytoskeleton organization
FPKM:2.28 TPM:1.78
2111 A_BomaASG_c13152_g1_i1
530bp
LOW_QUALITY_PROTEIN:_protein_sidekick_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042675 P compound eye cone cell differentiation
GO:0046533 P negative regulation of photoreceptor cell differentiation
GO:0050931 P pigment cell differentiation
GO:0098595 C perivitelline space
FPKM:3.34 TPM:2.62
2112 A_BomaASG_c13154_g1_i1
832bp
uncharacterized_protein_LOC101740899_[Bombyx_mori]
FPKM:2.18 TPM:1.70
2113 A_BomaASG_c13155_g1_i1
250bp
FPKM:0.00 TPM:0.00
2114 A_BomaASG_c13156_g1_i1
271bp
PREDICTED:_uncharacterized_protein_LOC106137229_[Amyelois_transitella]
FPKM:0.00 TPM:0.00
2115 A_BomaASG_c13156_g1_i2
593bp
PREDICTED:_uncharacterized_protein_LOC106137229_[Amyelois_transitella]
FPKM:3.61 TPM:2.82
2116 A_BomaASG_c13157_g1_i1
289bp
LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
GO:0000904 P cell morphogenesis involved in differentiation
GO:0001764 P neuron migration
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007275 P multicellular organism development
GO:0010842 P retina layer formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030425 C dendrite
GO:2000171 P negative regulation of dendrite development
FPKM:2.43 TPM:1.90
2117 A_BomaASG_c13158_g1_i1
593bp
FPKM:19.91 TPM:15.58
2118 A_BomaASG_c13159_g1_i1
704bp
attractin-like_protein_1_isoform_X1_[Bombyx_mori]
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
FPKM:2.78 TPM:2.18
2119 A_BomaASG_c1315_g1_i1
220bp
FPKM:10.39 TPM:8.13
2120 A_BomaASG_c13160_g1_i1
729bp
FPKM:2.38 TPM:1.86
2121 A_BomaASG_c13161_g1_i1
1866bp
facilitated_trehalose_transporter_Tret1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:41.27 TPM:32.30
2122 A_BomaASG_c13162_g1_i1
445bp
Exosome_complex_component_RRP41_[Papilio_xuthus]
FPKM:1.50 TPM:1.18
2123 A_BomaASG_c13163_g1_i1
487bp
myoneurin_isoform_X7_[Bombyx_mori]
FPKM:1.64 TPM:1.28
2124 A_BomaASG_c13165_g1_i1
304bp
FPKM:10.57 TPM:8.27
2125 A_BomaASG_c13167_g1_i1
643bp
RNA-directed_DNA_polymerase_from_mobile_element_jockey_[Danaus_plexippus_plexippus]
FPKM:1.45 TPM:1.14
2126 A_BomaASG_c13168_g1_i1
281bp
FPKM:3.01 TPM:2.35
2127 A_BomaASG_c13169_g1_i1
262bp
FPKM:5.54 TPM:4.34
2128 A_BomaASG_c13170_g1_i1
316bp
FPKM:1.01 TPM:0.79
2129 A_BomaASG_c13171_g1_i1
745bp
histone_deacetylase_complex_subunit_SAP18_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000398 P mRNA splicing, via spliceosome
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008134 F transcription factor binding
GO:0016580 C Sin3 complex
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
FPKM:24.03 TPM:18.80
2130 A_BomaASG_c13173_g1_i1
221bp
FPKM:3.94 TPM:3.08
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