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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1531 A_BomaASG_c12419_g1_i1
357bp
FPKM:1.62 TPM:1.26
1532 A_BomaASG_c12420_g1_i1
310bp
FPKM:2.45 TPM:1.92
1533 A_BomaASG_c12422_g1_i1
208bp
DNA_ligase_4_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1534 A_BomaASG_c12422_g1_i2
669bp
DNA_ligase_4_[Bombyx_mori]
FPKM:2.55 TPM:1.99
1535 A_BomaASG_c12423_g1_i1
304bp
FPKM:1.46 TPM:1.14
1536 A_BomaASG_c12424_g1_i1
365bp
vacuolar_protein_sorting_4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000815 C ESCRT III complex
GO:0000920 P septum digestion after cytokinesis
GO:0000922 C spindle pole
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005774 C vacuolar membrane
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006900 P vesicle budding from membrane
GO:0006914 P autophagy
GO:0006997 P nucleus organization
GO:0007033 P vacuole organization
GO:0007049 P cell cycle
GO:0007080 P mitotic metaphase plate congression
GO:0008022 F protein C-terminus binding
GO:0008568 F microtubule-severing ATPase activity
GO:0009838 P abscission
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0016197 P endosomal transport
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0019058 P viral life cycle
GO:0019076 P viral release from host cell
GO:0019904 F protein domain specific binding
GO:0030496 C midbody
GO:0031122 P cytoplasmic microtubule organization
GO:0031902 C late endosome membrane
GO:0032367 P intracellular cholesterol transport
GO:0032466 P negative regulation of cytokinesis
GO:0032880 P regulation of protein localization
GO:0034058 P endosomal vesicle fusion
GO:0036258 P multivesicular body assembly
GO:0039702 P viral budding via host ESCRT complex
GO:0042623 F ATP hydrolysis activity
GO:0043162 P ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0048471 C perinuclear region of cytoplasm
GO:0051301 P cell division
GO:0061738 P late endosomal microautophagy
GO:0070062 C extracellular exosome
GO:0072319 P vesicle uncoating
GO:0090543 C Flemming body
GO:0090611 P ubiquitin-independent protein catabolic process via the multivesicular body sorting pathway
GO:1902188 P obsolete positive regulation of viral release from host cell
GO:1903076 P regulation of protein localization to plasma membrane
GO:1903543 P positive regulation of exosomal secretion
GO:1903774 P positive regulation of viral budding via host ESCRT complex
GO:1903902 P positive regulation of viral life cycle
GO:1904896 P ESCRT complex disassembly
GO:1904903 P ESCRT III complex disassembly
FPKM:1.56 TPM:1.22
1537 A_BomaASG_c12425_g1_i1
361bp
FPKM:2.64 TPM:2.07
1538 A_BomaASG_c12426_g1_i1
298bp
unconventional_myosin-Ib-like_[Bombyx_mori]
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0007015 P actin filament organization
GO:0007399 P nervous system development
GO:0008152 P metabolic process
GO:0010008 C endosome membrane
GO:0016459 C myosin complex
GO:0030048 P actin filament-based movement
GO:0030175 C filopodium
GO:0030898 F microfilament motor activity
GO:0032588 C trans-Golgi network membrane
GO:0048471 C perinuclear region of cytoplasm
GO:0051015 F actin filament binding
GO:0051017 P actin filament bundle assembly
GO:0070062 C extracellular exosome
GO:0071944 C cell periphery
FPKM:1.14 TPM:0.89
1539 A_BomaASG_c12428_g1_i1
590bp
FPKM:3.01 TPM:2.35
1540 A_BomaASG_c12430_g1_i1
227bp
PREDICTED:_uncharacterized_protein_LOC106708587_[Papilio_machaon]
FPKM:1.46 TPM:1.14
1541 A_BomaASG_c12431_g1_i1
259bp
FPKM:2.59 TPM:2.03
1542 A_BomaASG_c12433_g1_i1
277bp
FPKM:0.89 TPM:0.69
1543 A_BomaASG_c12435_g1_i1
353bp
FPKM:1.92 TPM:1.51
1544 A_BomaASG_c12437_g1_i1
324bp
FPKM:1.29 TPM:1.01
1545 A_BomaASG_c12438_g1_i1
203bp
hypothetical_protein_RR46_03798_[Papilio_xuthus]
FPKM:4.12 TPM:3.23
1546 A_BomaASG_c12444_g1_i1
286bp
FPKM:2.48 TPM:1.94
1547 A_BomaASG_c12447_g1_i1
755bp
PREDICTED:_phosphatidylinositol_N-acetylglucosaminyltransferase_subunit_P_[Papilio_xuthus]
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0017176 F phosphatidylinositol N-acetylglucosaminyltransferase activity
FPKM:5.35 TPM:4.19
1548 A_BomaASG_c12447_g1_i2
884bp
PREDICTED:_phosphatidylinositol_N-acetylglucosaminyltransferase_subunit_P_[Papilio_xuthus]
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0017176 F phosphatidylinositol N-acetylglucosaminyltransferase activity
FPKM:37.67 TPM:29.48
1549 A_BomaASG_c12449_g1_i1
517bp
FPKM:1.05 TPM:0.82
1550 A_BomaASG_c12450_g1_i1
509bp
uncharacterized_protein_LOC101742695_[Bombyx_mori]
FPKM:3.39 TPM:2.65
1551 A_BomaASG_c12453_g1_i1
223bp
FPKM:11.52 TPM:9.01
1552 A_BomaASG_c12455_g1_i1
213bp
FPKM:5.29 TPM:4.14
1553 A_BomaASG_c12457_g1_i1
436bp
uncharacterized_protein_LOC110386244_[Bombyx_mori]
FPKM:2.33 TPM:1.82
1554 A_BomaASG_c12459_g1_i1
272bp
FPKM:1.85 TPM:1.45
1555 A_BomaASG_c1245_g1_i1
221bp
FPKM:1.58 TPM:1.23
1556 A_BomaASG_c12463_g1_i1
578bp
FPKM:0.90 TPM:0.71
1557 A_BomaASG_c12465_g1_i1
1694bp
serine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004828 F serine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006434 P seryl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0070062 C extracellular exosome
GO:0097056 P selenocysteinyl-tRNA(Sec) biosynthetic process
FPKM:29.57 TPM:23.13
1558 A_BomaASG_c12466_g1_i1
731bp
FPKM:1.04 TPM:0.81
1559 A_BomaASG_c12467_g1_i1
237bp
FPKM:3.89 TPM:3.04
1560 A_BomaASG_c12468_g1_i1
337bp
FPKM:1.20 TPM:0.94
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