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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1501 A_BomaASG_c12377_g1_i1
475bp
FPKM:2.38 TPM:1.87
1502 A_BomaASG_c12379_g1_i1
246bp
LOW_QUALITY_PROTEIN:_papilin_[Bombyx_mori]
GO:0004222 F metalloendopeptidase activity
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030198 P extracellular matrix organization
GO:0030414 F peptidase inhibitor activity
GO:0031012 C extracellular matrix
FPKM:1.76 TPM:1.38
1503 A_BomaASG_c1237_g1_i1
257bp
FPKM:0.00 TPM:0.00
1504 A_BomaASG_c1237_g1_i2
375bp
FPKM:2.47 TPM:1.94
1505 A_BomaASG_c12381_g1_i1
374bp
FPKM:2.24 TPM:1.75
1506 A_BomaASG_c12384_g1_i1
264bp
FPKM:2.97 TPM:2.32
1507 A_BomaASG_c12385_g1_i1
360bp
LOW_QUALITY_PROTEIN:_condensin_complex_subunit_1_[Bombyx_mori]
FPKM:2.39 TPM:1.87
1508 A_BomaASG_c12387_g1_i1
336bp
vacuolar_protein_sorting-associated_protein_13D_[Bombyx_mori]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
FPKM:3.31 TPM:2.59
1509 A_BomaASG_c12388_g1_i1
278bp
FPKM:1.32 TPM:1.03
1510 A_BomaASG_c12389_g1_i1
635bp
FPKM:2.27 TPM:1.78
1511 A_BomaASG_c1238_g1_i1
330bp
GTPase-activating_protein_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007165 P signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008293 P torso signaling pathway
GO:0008595 P anterior/posterior axis specification, embryo
GO:0016321 P female meiosis chromosome segregation
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0035556 P intracellular signal transduction
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0045678 P positive regulation of R7 cell differentiation
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046872 F metal ion binding
FPKM:3.42 TPM:2.67
1512 A_BomaASG_c12391_g1_i1
259bp
FPKM:1.55 TPM:1.22
1513 A_BomaASG_c12392_g1_i1
510bp
Uncharacterized_protein_OBRU01_13767_[Operophtera_brumata]
FPKM:1.69 TPM:1.32
1514 A_BomaASG_c12393_g1_i1
276bp
FPKM:1.34 TPM:1.05
1515 A_BomaASG_c12394_g1_i1
369bp
FPKM:1.02 TPM:0.80
1516 A_BomaASG_c12395_g1_i1
277bp
FPKM:2.66 TPM:2.08
1517 A_BomaASG_c12396_g1_i1
236bp
FPKM:39.32 TPM:30.77
1518 A_BomaASG_c12399_g1_i1
458bp
transmembrane_emp24_domain-containing_protein_5_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005801 C cis-Golgi network
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
GO:0070971 C endoplasmic reticulum exit site
GO:0090161 P Golgi ribbon formation
FPKM:1.80 TPM:1.41
1519 A_BomaASG_c12401_g1_i1
275bp
FPKM:1.80 TPM:1.41
1520 A_BomaASG_c12404_g1_i1
219bp
unnamed_protein_product_[Oncorhynchus_mykiss]
FPKM:4.86 TPM:3.80
1521 A_BomaASG_c12405_g1_i1
212bp
nose_resistant_to_fluoxetine_protein_6_[Bombyx_mori]
FPKM:4.47 TPM:3.50
1522 A_BomaASG_c12406_g1_i1
375bp
uncharacterized_protein_LOC101746443_[Bombyx_mori]
FPKM:2.23 TPM:1.74
1523 A_BomaASG_c12407_g1_i1
217bp
FPKM:1.67 TPM:1.30
1524 A_BomaASG_c12408_g1_i1
246bp
FPKM:3.53 TPM:2.76
1525 A_BomaASG_c12409_g1_i1
417bp
FPKM:2.08 TPM:1.63
1526 A_BomaASG_c1240_g1_i1
272bp
FPKM:2.31 TPM:1.81
1527 A_BomaASG_c12412_g1_i1
300bp
Zinc_finger_protein_358_[Papilio_machaon]
FPKM:3.00 TPM:2.34
1528 A_BomaASG_c12414_g1_i1
255bp
unnamed_protein_product,_partial_[Bombyx_mori]
FPKM:3.23 TPM:2.52
1529 A_BomaASG_c12416_g1_i1
206bp
FPKM:3.93 TPM:3.07
1530 A_BomaASG_c12418_g1_i1
2178bp
four_and_a_half_LIM_domains_protein_2_isoform_X6_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005925 C focal adhesion
GO:0007517 P muscle organ development
GO:0008270 F zinc ion binding
GO:0030018 C Z disc
GO:0030036 P actin cytoskeleton organization
GO:0046872 F metal ion binding
FPKM:87.21 TPM:68.24
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