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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1441 A_BomaASG_c12299_g1_i1
301bp
FPKM:2.23 TPM:1.75
1442 A_BomaASG_c122_g1_i1
1686bp
proteasome_26S_non-ATPase_subunit_4_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000209 P protein polyubiquitination
GO:0000502 C proteasome complex
GO:0002223 P stimulatory C-type lectin receptor signaling pathway
GO:0002479 P antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006521 P regulation of cellular amino acid metabolic process
GO:0008134 F transcription factor binding
GO:0008540 C proteasome regulatory particle, base subcomplex
GO:0022624 C proteasome accessory complex
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0033209 P tumor necrosis factor-mediated signaling pathway
GO:0038061 P NIK/NF-kappaB signaling
GO:0038095 P Fc-epsilon receptor signaling pathway
GO:0042802 F identical protein binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043248 P proteasome assembly
GO:0043488 P regulation of mRNA stability
GO:0044822 F RNA binding
GO:0050852 P T cell receptor signaling pathway
GO:0051436 P obsolete negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 P obsolete positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
GO:0060071 P Wnt signaling pathway, planar cell polarity pathway
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0090263 P positive regulation of canonical Wnt signaling pathway
FPKM:68.50 TPM:53.60
1443 A_BomaASG_c12300_g1_i1
481bp
glomulin-like_isoform_X1_[Helicoverpa_armigera]
FPKM:3.35 TPM:2.62
1444 A_BomaASG_c12301_g1_i1
203bp
FPKM:2.06 TPM:1.61
1445 A_BomaASG_c12305_g1_i1
204bp
PREDICTED:_LOW_QUALITY_PROTEIN:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Papilio_machaon]
FPKM:0.00 TPM:0.00
1446 A_BomaASG_c12306_g1_i1
217bp
FPKM:1.67 TPM:1.30
1447 A_BomaASG_c12307_g1_i1
483bp
FPKM:1.66 TPM:1.30
1448 A_BomaASG_c12308_g1_i1
360bp
FPKM:1.59 TPM:1.25
1449 A_BomaASG_c12309_g1_i1
645bp
FPKM:2.34 TPM:1.83
1450 A_BomaASG_c12311_g1_i1
1335bp
kelch_domain-containing_protein_3_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0051321 P meiotic cell cycle
FPKM:21.18 TPM:16.57
1451 A_BomaASG_c12312_g1_i1
375bp
AMP-binding_enzyme,_partial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
GO:0034976 P response to endoplasmic reticulum stress
FPKM:2.47 TPM:1.94
1452 A_BomaASG_c12315_g1_i1
270bp
uncharacterized_protein_LOC101737437_isoform_X2_[Bombyx_mori]
GO:0001580 P detection of chemical stimulus involved in sensory perception of bitter taste
GO:0005216 F ion channel activity
GO:0005261 F cation channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006816 P calcium ion transport
GO:0007602 P phototransduction
GO:0007638 P mechanosensory behavior
GO:0009408 P response to heat
GO:0009416 P response to light stimulus
GO:0010378 P temperature compensation of the circadian clock
GO:0015276 F ligand-gated ion channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019233 P sensory perception of pain
GO:0023041 P neuronal signal transduction
GO:0033038 F bitter taste receptor activity
GO:0034220 P ion transmembrane transport
GO:0034605 P cellular response to heat
GO:0034703 C cation channel complex
GO:0040040 P thermosensory behavior
GO:0043052 P thermotaxis
GO:0046957 P negative phototaxis
GO:0050850 P positive regulation of calcium-mediated signaling
GO:0050896 P response to stimulus
GO:0050960 P detection of temperature stimulus involved in thermoception
GO:0050965 P detection of temperature stimulus involved in sensory perception of pain
GO:0050968 P detection of chemical stimulus involved in sensory perception of pain
GO:0055085 P transmembrane transport
GO:0097604 F temperature-gated cation channel activity
GO:0098655 P cation transmembrane transport
FPKM:1.88 TPM:1.47
1453 A_BomaASG_c12317_g1_i1
202bp
FPKM:4.19 TPM:3.28
1454 A_BomaASG_c12318_g1_i1
292bp
PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]
FPKM:1.58 TPM:1.24
1455 A_BomaASG_c12319_g1_i1
589bp
probable_Rho_GTPase-activating_protein_CG5521_isoform_X1_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0046982 F protein heterodimerization activity
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:0090630 P activation of GTPase activity
FPKM:5.02 TPM:3.93
1456 A_BomaASG_c12320_g1_i1
473bp
FPKM:1.03 TPM:0.80
1457 A_BomaASG_c12321_g1_i1
286bp
FPKM:2.90 TPM:2.27
1458 A_BomaASG_c12323_g1_i1
281bp
FPKM:4.73 TPM:3.70
1459 A_BomaASG_c12324_g1_i1
227bp
FPKM:1.46 TPM:1.14
1460 A_BomaASG_c12325_g1_i1
695bp
TATA-binding_protein-associated_factor_172_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0035562 P negative regulation of chromatin binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0045892 P negative regulation of transcription, DNA-templated
FPKM:4.85 TPM:3.79
1461 A_BomaASG_c12326_g1_i1
215bp
FPKM:4.28 TPM:3.35
1462 A_BomaASG_c12328_g1_i1
245bp
FPKM:2.38 TPM:1.86
1463 A_BomaASG_c12329_g1_i1
284bp
L-dopachrome_tautomerase_yellow-f2_[Bombyx_mori]
FPKM:3.36 TPM:2.63
1464 A_BomaASG_c12330_g1_i1
209bp
FPKM:0.00 TPM:0.00
1465 A_BomaASG_c12331_g1_i1
222bp
FPKM:3.11 TPM:2.44
1466 A_BomaASG_c12333_g1_i1
415bp
beta-1,4-N-acetylgalactosaminyltransferase_bre-4-like_isoform_X2_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0005975 P carbohydrate metabolic process
GO:0006486 P protein glycosylation
GO:0008376 F acetylgalactosaminyltransferase activity
GO:0009636 P response to toxic substance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0033207 F beta-1,4-N-acetylgalactosaminyltransferase activity
GO:0045747 P positive regulation of Notch signaling pathway
GO:0046872 F metal ion binding
GO:0075015 P formation of infection structure
FPKM:2.72 TPM:2.13
1467 A_BomaASG_c12334_g1_i1
245bp
FPKM:5.94 TPM:4.65
1468 A_BomaASG_c12335_g1_i1
417bp
FPKM:4.16 TPM:3.25
1469 A_BomaASG_c12336_g1_i1
253bp
FPKM:1.64 TPM:1.29
1470 A_BomaASG_c12337_g1_i1
788bp
laminin_subunit_beta-1_[Bombyx_mori]
GO:0003143 P embryonic heart tube morphogenesis
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
GO:0008406 P gonad development
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0012505 C endomembrane system
GO:0016477 P cell migration
GO:0030198 P extracellular matrix organization
GO:0031012 C extracellular matrix
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0045089 P positive regulation of innate immune response
GO:0048513 P animal organ development
GO:0048598 P embryonic morphogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0055013 P cardiac muscle cell development
GO:0070831 P basement membrane assembly
FPKM:1.90 TPM:1.48
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