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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1411 A_BomaASG_c12259_g1_i1
234bp
FPKM:3.35 TPM:2.62
1412 A_BomaASG_c1225_g1_i1
595bp
FPKM:3.47 TPM:2.71
1413 A_BomaASG_c12260_g1_i1
231bp
FPKM:11.12 TPM:8.70
1414 A_BomaASG_c12261_g1_i1
378bp
FPKM:5.13 TPM:4.01
1415 A_BomaASG_c12262_g1_i1
271bp
melatonin_receptor-like_[Bombyx_mori]
FPKM:1.40 TPM:1.09
1416 A_BomaASG_c12263_g1_i1
464bp
FPKM:1.94 TPM:1.52
1417 A_BomaASG_c12264_g1_i1
219bp
FPKM:4.86 TPM:3.80
1418 A_BomaASG_c12265_g1_i1
260bp
FPKM:1.54 TPM:1.20
1419 A_BomaASG_c12266_g1_i1
878bp
thioredoxin-like_protein_4A_[Bombyx_mori]
GO:0000245 P spliceosomal complex assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008380 P RNA splicing
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0051301 P cell division
FPKM:26.86 TPM:21.02
1420 A_BomaASG_c12267_g1_i1
308bp
FPKM:1.78 TPM:1.39
1421 A_BomaASG_c12268_g1_i1
1307bp
AP-2_complex_subunit_alpha_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030131 C clathrin adaptor complex
GO:0048488 P synaptic vesicle endocytosis
FPKM:31.78 TPM:24.87
1422 A_BomaASG_c12269_g1_i1
327bp
FPKM:2.53 TPM:1.98
1423 A_BomaASG_c12271_g1_i1
477bp
FPKM:7.78 TPM:6.09
1424 A_BomaASG_c12272_g1_i1
548bp
FPKM:1.66 TPM:1.30
1425 A_BomaASG_c12274_g1_i1
270bp
uncharacterized_protein_LOC101742154_isoform_X2_[Bombyx_mori]
FPKM:9.40 TPM:7.35
1426 A_BomaASG_c12275_g1_i1
361bp
FPKM:1.32 TPM:1.03
1427 A_BomaASG_c12276_g1_i1
267bp
FPKM:2.41 TPM:1.89
1428 A_BomaASG_c12277_g1_i1
231bp
FPKM:2.08 TPM:1.63
1429 A_BomaASG_c12278_g1_i1
271bp
FPKM:1.40 TPM:1.09
1430 A_BomaASG_c12279_g1_i1
469bp
FPKM:1.21 TPM:0.95
1431 A_BomaASG_c12285_g1_i1
325bp
FPKM:2.56 TPM:2.00
1432 A_BomaASG_c12286_g1_i1
305bp
FPKM:1.81 TPM:1.42
1433 A_BomaASG_c12287_g1_i1
639bp
reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:2.70 TPM:2.12
1434 A_BomaASG_c12289_g1_i1
260bp
FPKM:1.54 TPM:1.20
1435 A_BomaASG_c12291_g1_i1
304bp
FPKM:1.09 TPM:0.86
1436 A_BomaASG_c12293_g1_i1
239bp
uncharacterized_protein_LOC105842057_[Bombyx_mori]
FPKM:1.90 TPM:1.49
1437 A_BomaASG_c12294_g1_i1
222bp
FPKM:1.56 TPM:1.22
1438 A_BomaASG_c12295_g1_i1
406bp
FPKM:4.77 TPM:3.73
1439 A_BomaASG_c12296_g1_i1
204bp
FPKM:1.01 TPM:0.79
1440 A_BomaASG_c12297_g1_i1
498bp
FPKM:3.65 TPM:2.86
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