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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1261 A_BomaASG_c12046_g1_i1
205bp
FPKM:2.00 TPM:1.56
1262 A_BomaASG_c12047_g1_i1
258bp
FPKM:3.66 TPM:2.86
1263 A_BomaASG_c12050_g1_i1
202bp
FPKM:5.24 TPM:4.10
1264 A_BomaASG_c12051_g1_i1
461bp
FPKM:1.96 TPM:1.53
1265 A_BomaASG_c12054_g1_i1
745bp
ribosome_maturation_protein_SBDS_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0001833 P inner cell mass cell proliferation
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006364 P rRNA processing
GO:0008017 F microtubule binding
GO:0008150 P biological_process
GO:0008283 P cell population proliferation
GO:0019843 F rRNA binding
GO:0030282 P bone mineralization
GO:0030595 P leukocyte chemotaxis
GO:0042254 P ribosome biogenesis
GO:0042256 P mature ribosome assembly
GO:0043022 F ribosome binding
GO:0044822 F RNA binding
GO:0048539 P bone marrow development
FPKM:33.46 TPM:26.18
1266 A_BomaASG_c12056_g1_i1
258bp
uncharacterized_protein_LOC101738207_[Bombyx_mori]
FPKM:2.09 TPM:1.64
1267 A_BomaASG_c12058_g1_i1
228bp
FPKM:1.44 TPM:1.13
1268 A_BomaASG_c12060_g1_i1
230bp
FPKM:5.63 TPM:4.40
1269 A_BomaASG_c12062_g1_i1
338bp
FPKM:7.13 TPM:5.58
1270 A_BomaASG_c12063_g1_i1
239bp
FPKM:1.27 TPM:0.99
1271 A_BomaASG_c12065_g1_i1
333bp
FPKM:2.14 TPM:1.67
1272 A_BomaASG_c12066_g1_i1
204bp
FPKM:2.03 TPM:1.59
1273 A_BomaASG_c12067_g1_i1
269bp
FPKM:1.42 TPM:1.11
1274 A_BomaASG_c12070_g1_i1
272bp
FPKM:1.85 TPM:1.45
1275 A_BomaASG_c12072_g1_i1
389bp
FPKM:1.82 TPM:1.42
1276 A_BomaASG_c12073_g1_i1
223bp
FPKM:0.77 TPM:0.60
1277 A_BomaASG_c12075_g1_i1
318bp
uncharacterized_protein_LOC110386244_[Bombyx_mori]
FPKM:2.67 TPM:2.09
1278 A_BomaASG_c12076_g1_i1
217bp
FPKM:4.16 TPM:3.26
1279 A_BomaASG_c12077_g1_i1
203bp
FPKM:3.09 TPM:2.42
1280 A_BomaASG_c12078_g1_i1
402bp
uncharacterized_protein_LOC101741592_[Bombyx_mori]
FPKM:5.73 TPM:4.49
1281 A_BomaASG_c12078_g2_i1
203bp
uncharacterized_protein_LOC101741592_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1282 A_BomaASG_c12080_g1_i1
253bp
FPKM:5.48 TPM:4.29
1283 A_BomaASG_c12081_g1_i1
267bp
Bardet-Biedl_syndrome_1_protein_isoform_X3_[Bombyx_mori]
GO:0001103 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001895 P retina homeostasis
GO:0005113 F patched binding
GO:0005119 F smoothened binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0006810 P transport
GO:0007601 P visual perception
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0034464 C BBSome
GO:0035058 P non-motile cilium assembly
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0043001 P Golgi to plasma membrane protein transport
GO:0045494 P photoreceptor cell maintenance
GO:0050896 P response to stimulus
GO:0060170 C ciliary membrane
GO:0061512 P protein localization to cilium
FPKM:2.41 TPM:1.89
1284 A_BomaASG_c12082_g1_i1
222bp
FPKM:1.56 TPM:1.22
1285 A_BomaASG_c12083_g1_i1
235bp
FPKM:3.31 TPM:2.59
1286 A_BomaASG_c12084_g1_i1
320bp
FPKM:1.98 TPM:1.55
1287 A_BomaASG_c12085_g1_i1
353bp
FPKM:3.02 TPM:2.37
1288 A_BomaASG_c12087_g1_i1
206bp
FPKM:6.87 TPM:5.38
1289 A_BomaASG_c12089_g1_i1
347bp
FPKM:18.14 TPM:14.19
1290 A_BomaASG_c12094_g1_i1
364bp
type_I_inositol_3,4-bisphosphate_4-phosphatase_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0006798 P polyphosphate catabolic process
GO:0007165 P signal transduction
GO:0016311 P dephosphorylation
GO:0016316 F phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity
GO:0016787 F hydrolase activity
GO:0034597 F phosphatidylinositol-4,5-bisphosphate 4-phosphatase activity
GO:0036092 P phosphatidylinositol-3-phosphate biosynthetic process
FPKM:1.82 TPM:1.43
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