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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
871 A_BomoMSG_c10959_g1_i1
219bp
FPKM:5.87 TPM:3.06
872 A_BomoMSG_c10960_g1_i1
476bp
FPKM:7.54 TPM:3.92
873 A_BomoMSG_c10962_g1_i1
513bp
FPKM:2.31 TPM:1.20
874 A_BomoMSG_c10963_g1_i1
368bp
 PREDICTED:_uncharacterized_protein_LOC106131266_isoform_X3_[Amyelois_transitella]
FPKM:2.20 TPM:1.14
875 A_BomoMSG_c10964_g1_i1
251bp
 phosphatidylinositol_4,5-bisphosphate_3-kinase_catalytic_subunit_delta_isoform_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000187 P obsolete activation of MAPK activity
GO:0001935 P endothelial cell proliferation
GO:0001952 P regulation of cell-matrix adhesion
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005942 C phosphatidylinositol 3-kinase complex
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0006874 P cellular calcium ion homeostasis
GO:0006897 P endocytosis
GO:0006914 P autophagy
GO:0006935 P chemotaxis
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007165 P signal transduction
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0009611 P response to wounding
GO:0010508 P positive regulation of autophagy
GO:0010628 P positive regulation of gene expression
GO:0014065 P phosphatidylinositol 3-kinase signaling
GO:0014066 P regulation of phosphatidylinositol 3-kinase signaling
GO:0016301 F kinase activity
GO:0016303 F 1-phosphatidylinositol-3-kinase activity
GO:0016310 P phosphorylation
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030168 P platelet activation
GO:0035004 F phosphatidylinositol 3-kinase activity
GO:0035005 F 1-phosphatidylinositol-4-phosphate 3-kinase activity
GO:0036092 P phosphatidylinositol-3-phosphate biosynthetic process
GO:0038095 P Fc-epsilon receptor signaling pathway
GO:0038096 P Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0040016 P embryonic cleavage
GO:0043560 F insulin receptor substrate binding
GO:0045171 C intercellular bridge
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0046934 F phosphatidylinositol-4,5-bisphosphate 3-kinase activity
GO:0048010 P vascular endothelial growth factor receptor signaling pathway
GO:0048015 P phosphatidylinositol-mediated signaling
GO:0050852 P T cell receptor signaling pathway
GO:0050900 P leukocyte migration
GO:0060055 P angiogenesis involved in wound healing
GO:0070527 P platelet aggregation
GO:2000369 P regulation of clathrin-dependent endocytosis
FPKM:1.76 TPM:0.92
876 A_BomoMSG_c10965_g1_i1
288bp
 uncharacterized_protein_LOC110385953_[Bombyx_mori]
FPKM:2.60 TPM:1.35
877 A_BomoMSG_c10966_g1_i1
486bp
 mitotic-spindle_organizing_protein_1-like_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0008274 C gamma-tubulin large complex
GO:0033566 P gamma-tubulin complex localization
FPKM:12.08 TPM:6.29
878 A_BomoMSG_c10966_g1_i2
560bp
 mitotic-spindle_organizing_protein_1-like_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0008274 C gamma-tubulin large complex
GO:0033566 P gamma-tubulin complex localization
FPKM:24.00 TPM:12.48
879 A_BomoMSG_c10967_g1_i1
458bp
FPKM:2.72 TPM:1.42
880 A_BomoMSG_c10968_g1_i1
647bp
 LOW_QUALITY_PROTEIN:_supporter_of_activation_of_yellow_protein_[Bombyx_mori]
FPKM:3.01 TPM:1.57
881 A_BomoMSG_c10970_g1_i1
459bp
 E2F_transcription_factor_1_[Bombyx_mori]
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0008134 F transcription factor binding
GO:0051726 P regulation of cell cycle
GO:0072332 P intrinsic apoptotic signaling pathway by p53 class mediator
GO:1990086 P lens fiber cell apoptotic process
FPKM:4.85 TPM:2.52
882 A_BomoMSG_c10972_g1_i1
233bp
FPKM:2.13 TPM:1.11
883 A_BomoMSG_c10973_g1_i1
275bp
FPKM:3.35 TPM:1.74
884 A_BomoMSG_c10974_g1_i1
1179bp
FPKM:46.01 TPM:23.93
885 A_BomoMSG_c10975_g1_i1
333bp
 protein_HID1_isoform_X2_[Bombyx_mori]
GO:0000138 C Golgi trans cisterna
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005797 C Golgi medial cisterna
GO:0005881 C cytoplasmic microtubule
GO:0006886 P intracellular protein transport
GO:0016020 C membrane
GO:0031001 P response to brefeldin A
GO:0070062 C extracellular exosome
GO:0090498 C extrinsic component of Golgi membrane
FPKM:0.00 TPM:0.00
886 A_BomoMSG_c10975_g1_i2
533bp
 protein_HID1_isoform_X2_[Bombyx_mori]
GO:0000138 C Golgi trans cisterna
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005797 C Golgi medial cisterna
GO:0005881 C cytoplasmic microtubule
GO:0006886 P intracellular protein transport
GO:0016020 C membrane
GO:0031001 P response to brefeldin A
GO:0070062 C extracellular exosome
GO:0090498 C extrinsic component of Golgi membrane
FPKM:3.28 TPM:1.71
887 A_BomoMSG_c10976_g1_i1
741bp
 transmembrane_protein_precursor_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0015095 F magnesium ion transmembrane transporter activity
GO:0015693 P magnesium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031901 C early endosome membrane
GO:0072546 C EMC complex
GO:1903830 P magnesium ion transmembrane transport
FPKM:42.05 TPM:21.88
888 A_BomoMSG_c10977_g1_i1
225bp
FPKM:6.22 TPM:3.24
889 A_BomoMSG_c10978_g1_i1
348bp
FPKM:0.00 TPM:0.00
890 A_BomoMSG_c10978_g1_i2
471bp
FPKM:2.24 TPM:1.16
891 A_BomoMSG_c10979_g1_i1
226bp
 PREDICTED:_uncharacterized_protein_LOC106130790_[Amyelois_transitella]
FPKM:6.15 TPM:3.20
892 A_BomoMSG_c10980_g1_i1
379bp
FPKM:2.62 TPM:1.36
893 A_BomoMSG_c10981_g1_i1
507bp
FPKM:1.34 TPM:0.70
894 A_BomoMSG_c10982_g1_i1
524bp
 kelch-like_protein_5_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003779 F actin binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
GO:0016567 P protein ubiquitination
GO:0031463 C Cul3-RING ubiquitin ligase complex
FPKM:2.88 TPM:1.50
895 A_BomoMSG_c10983_g1_i1
474bp
FPKM:3.88 TPM:2.02
896 A_BomoMSG_c10984_g1_i1
847bp
 glycogen_debranching_enzyme_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004133 F glycogen debranching enzyme activity
GO:0004134 F 4-alpha-glucanotransferase activity
GO:0004135 F amylo-alpha-1,6-glucosidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0005978 P glycogen biosynthetic process
GO:0005980 P glycogen catabolic process
GO:0007584 P response to nutrient
GO:0008152 P metabolic process
GO:0009725 P response to hormone
GO:0016234 C inclusion body
GO:0016529 C sarcoplasmic reticulum
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030246 F carbohydrate binding
GO:0030247 F polysaccharide binding
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0043033 C isoamylase complex
GO:0051384 P response to glucocorticoid
FPKM:2.58 TPM:1.34
897 A_BomoMSG_c10985_g1_i1
326bp
FPKM:3.41 TPM:1.77
898 A_BomoMSG_c10986_g1_i1
410bp
 Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:2.54 TPM:1.32
899 A_BomoMSG_c10987_g1_i1
203bp
 uncharacterized_protein_LOC110385090_[Bombyx_mori]
FPKM:1.05 TPM:0.55
900 A_BomoMSG_c10987_g2_i1
296bp
 PREDICTED:_uncharacterized_protein_LOC106141233,_partial_[Amyelois_transitella]
FPKM:1.23 TPM:0.64
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