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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
481 A_BomoMSG_c10532_g1_i1
276bp
FPKM:2.37 TPM:1.23
482 A_BomoMSG_c10533_g1_i1
219bp
FPKM:1.68 TPM:0.87
483 A_BomoMSG_c10534_g1_i1
294bp
 uncharacterized_protein_LOC105842126_[Bombyx_mori]
FPKM:1.66 TPM:0.87
484 A_BomoMSG_c10536_g1_i1
806bp
 probable_serine/threonine-protein_kinase_fhkB_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:3.51 TPM:1.82
485 A_BomoMSG_c10536_g1_i2
785bp
 GATA_zinc_finger_domain-containing_protein_14_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:30.13 TPM:15.68
486 A_BomoMSG_c10536_g1_i3
697bp
 probable_serine/threonine-protein_kinase_fhkB_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:1.87 TPM:0.97
487 A_BomoMSG_c10537_g1_i1
508bp
 catenin_delta-2_isoform_X4_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005912 C adherens junction
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0008013 F beta-catenin binding
GO:0014069 C postsynaptic density
GO:0016055 P Wnt signaling pathway
GO:0016337 P cell-cell adhesion
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043204 C perikaryon
GO:0050808 P synapse organization
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0060997 P dendritic spine morphogenesis
FPKM:2.51 TPM:1.31
488 A_BomoMSG_c10538_g1_i1
632bp
 uncharacterized_protein_LOC101744707_[Bombyx_mori]
FPKM:5.59 TPM:2.91
489 A_BomoMSG_c10539_g1_i1
378bp
 protein_hairless_[Bombyx_mori]
FPKM:0.81 TPM:0.42
490 A_BomoMSG_c10539_g1_i2
640bp
 protein_hairless_[Bombyx_mori]
FPKM:2.56 TPM:1.33
491 A_BomoMSG_c1053_g1_i1
252bp
FPKM:8.16 TPM:4.24
492 A_BomoMSG_c10540_g1_i1
390bp
 Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Helicoverpa_armigera]
FPKM:2.75 TPM:1.43
493 A_BomoMSG_c10541_g1_i1
603bp
FPKM:3.04 TPM:1.58
494 A_BomoMSG_c10542_g1_i1
667bp
 cell_division_cycle_protein_16_homolog_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005680 C anaphase-promoting complex
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005876 C spindle microtubule
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016567 P protein ubiquitination
GO:0051301 P cell division
GO:0070979 P protein K11-linked ubiquitination
FPKM:3.24 TPM:1.69
495 A_BomoMSG_c10544_g1_i1
242bp
FPKM:5.79 TPM:3.01
496 A_BomoMSG_c10545_g1_i1
247bp
FPKM:3.67 TPM:1.91
497 A_BomoMSG_c10547_g1_i1
276bp
 sentrin-specific_protease_8-like,_partial_[Bombyx_mori]
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
FPKM:1.42 TPM:0.74
498 A_BomoMSG_c10547_g2_i1
221bp
 sentrin-specific_protease_8-like,_partial_[Bombyx_mori]
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
FPKM:4.09 TPM:2.13
499 A_BomoMSG_c10548_g1_i1
574bp
FPKM:53.12 TPM:27.64
500 A_BomoMSG_c10549_g1_i1
784bp
 E3_ubiquitin-protein_ligase_RFWD3_[Bombyx_mori]
GO:0002039 F p53 binding
GO:0002230 P positive regulation of defense response to virus by host
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0010212 P response to ionizing radiation
GO:0016567 P protein ubiquitination
GO:0016605 C PML body
GO:0016874 F ligase activity
GO:0031571 P mitotic G1 DNA damage checkpoint signaling
GO:0035861 C site of double-strand break
GO:0046872 F metal ion binding
GO:0097371 F MDM2/MDM4 family protein binding
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
GO:2000001 P regulation of DNA damage checkpoint
FPKM:2.93 TPM:1.52
501 A_BomoMSG_c10551_g1_i1
214bp
FPKM:5.38 TPM:2.80
502 A_BomoMSG_c10553_g1_i1
409bp
 acetoacetyl-CoA_thiolase_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003985 F acetyl-CoA C-acetyltransferase activity
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
503 A_BomoMSG_c10553_g1_i2
213bp
 acetoacetyl-CoA_thiolase_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003985 F acetyl-CoA C-acetyltransferase activity
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
504 A_BomoMSG_c10553_g1_i3
488bp
 acetoacetyl-CoA_thiolase_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003985 F acetyl-CoA C-acetyltransferase activity
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0046872 F metal ion binding
FPKM:1.42 TPM:0.74
505 A_BomoMSG_c10554_g1_i1
339bp
 uncharacterized_protein_LOC101740627_[Bombyx_mori]
FPKM:4.76 TPM:2.47
506 A_BomoMSG_c10558_g1_i1
376bp
FPKM:2.65 TPM:1.38
507 A_BomoMSG_c10559_g1_i1
1563bp
 meiosis-specific_nuclear_structural_protein_1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005882 C intermediate filament
GO:0005930 C axoneme
GO:0007283 P spermatogenesis
GO:0036126 C sperm flagellum
GO:0042802 F identical protein binding
GO:0044782 P cilium organization
GO:0045724 P positive regulation of cilium assembly
GO:0051321 P meiotic cell cycle
GO:0070986 P left/right axis specification
FPKM:3.22 TPM:1.68
508 A_BomoMSG_c10560_g1_i1
472bp
 ecdysone_receptor,_partial_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0004884 F nuclear receptor activity
GO:0005496 F steroid binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0035076 P ecdysone receptor-mediated signaling pathway
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
FPKM:4.28 TPM:2.23
509 A_BomoMSG_c10562_g1_i1
310bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:2.62 TPM:1.36
510 A_BomoMSG_c10564_g1_i1
442bp
 Uncharacterized_protein_OBRU01_10229,_partial_[Operophtera_brumata]
FPKM:9.44 TPM:4.91
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