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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4231 A_BomoMSG_c14511_g1_i1
239bp
 phospholipase_A1_isoform_X2_[Bombyx_mori]
FPKM:0.66 TPM:0.35
4232 A_BomoMSG_c14512_g1_i1
352bp
 chondroitin_sulfate_synthase_1_[Bombyx_mori]
GO:0002063 P chondrocyte development
GO:0005576 C extracellular region
GO:0005794 C Golgi apparatus
GO:0008376 F acetylgalactosaminyltransferase activity
GO:0009954 P proximal/distal pattern formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0030279 P negative regulation of ossification
GO:0031667 P response to nutrient levels
GO:0032580 C Golgi cisterna membrane
GO:0045880 P positive regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
GO:0047238 F glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity
GO:0050510 F N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity
GO:0051216 P cartilage development
GO:0051923 P sulfation
GO:0060349 P bone morphogenesis
FPKM:2.97 TPM:1.54
4233 A_BomoMSG_c14513_g1_i1
268bp
FPKM:5.56 TPM:2.89
4234 A_BomoMSG_c14514_g1_i1
1276bp
 PREDICTED:_uncharacterized_protein_LOC106716731_isoform_X3_[Papilio_machaon]
FPKM:44.66 TPM:23.24
4235 A_BomoMSG_c14517_g1_i1
309bp
FPKM:4.52 TPM:2.35
4236 A_BomoMSG_c14519_g1_i1
464bp
FPKM:2.29 TPM:1.19
4237 A_BomoMSG_c14520_g1_i1
1800bp
 hydroxysteroid_dehydrogenase_isoform_X1_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:33.80 TPM:17.58
4238 A_BomoMSG_c14520_g1_i2
2090bp
 hydroxysteroid_dehydrogenase_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:47.59 TPM:24.76
4239 A_BomoMSG_c14520_g1_i3
2147bp
 hydroxysteroid_dehydrogenase_isoform_X1_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:74.18 TPM:38.59
4240 A_BomoMSG_c14522_g1_i1
216bp
FPKM:4.36 TPM:2.27
4241 A_BomoMSG_c14524_g1_i1
216bp
FPKM:9.60 TPM:5.00
4242 A_BomoMSG_c14525_g1_i1
440bp
 rho_GTPase-activating_protein_21_[Bombyx_mori]
FPKM:1.86 TPM:0.97
4243 A_BomoMSG_c14528_g1_i1
240bp
 toll-like_receptor_6_isoform_X1_[Bombyx_mori]
FPKM:2.63 TPM:1.37
4244 A_BomoMSG_c14529_g1_i1
246bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Papilio_machaon]
FPKM:5.56 TPM:2.89
4245 A_BomoMSG_c1452_g1_i1
223bp
 intersectin-1_isoform_X3_[Bombyx_mori]
FPKM:5.58 TPM:2.90
4246 A_BomoMSG_c14532_g1_i1
291bp
 microtubule-associated_serine/threonine-protein_kinase_3_isoform_X7_[Bombyx_mori]
FPKM:0.85 TPM:0.44
4247 A_BomoMSG_c14533_g1_i1
269bp
 hypothetical_protein_[Acinetobacter_baumannii]
FPKM:28.09 TPM:14.62
4248 A_BomoMSG_c14534_g1_i1
1017bp
 TP53-regulating_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000408 C EKC/KEOPS complex
GO:0002039 F p53 binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0008033 P tRNA processing
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0016787 F hydrolase activity
GO:0070525 P tRNA threonylcarbamoyladenosine metabolic process
GO:1901796 P regulation of signal transduction by p53 class mediator
FPKM:28.31 TPM:14.73
4249 A_BomoMSG_c14534_g1_i2
1105bp
 TP53-regulating_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000408 C EKC/KEOPS complex
GO:0002039 F p53 binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0008033 P tRNA processing
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0016787 F hydrolase activity
GO:0070525 P tRNA threonylcarbamoyladenosine metabolic process
GO:1901796 P regulation of signal transduction by p53 class mediator
FPKM:4.46 TPM:2.32
4250 A_BomoMSG_c14535_g1_i1
307bp
 uncharacterized_protein_LOC101740483_[Bombyx_mori]
FPKM:6.87 TPM:3.57
4251 A_BomoMSG_c14536_g1_i1
326bp
FPKM:2.38 TPM:1.24
4252 A_BomoMSG_c14537_g1_i1
414bp
FPKM:5.22 TPM:2.72
4253 A_BomoMSG_c14540_g1_i1
291bp
FPKM:5.52 TPM:2.87
4254 A_BomoMSG_c14541_g1_i1
555bp
FPKM:2.07 TPM:1.08
4255 A_BomoMSG_c14543_g1_i1
419bp
 glutathione_S-transferase_epsilon_6_[Bombyx_mori]
GO:0004364 F glutathione transferase activity
GO:0008152 P metabolic process
GO:0016740 F transferase activity
FPKM:5.79 TPM:3.01
4256 A_BomoMSG_c14546_g1_i1
208bp
FPKM:4.88 TPM:2.54
4257 A_BomoMSG_c14547_g1_i1
794bp
 probable_multidrug_resistance-associated_protein_lethal(2)03659_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:1.77 TPM:0.92
4258 A_BomoMSG_c14548_g1_i1
250bp
 UHRF1-binding_protein_1-like_[Bombyx_mori]
FPKM:2.97 TPM:1.54
4259 A_BomoMSG_c14549_g1_i1
368bp
FPKM:3.85 TPM:2.00
4260 A_BomoMSG_c14551_g1_i1
243bp
FPKM:31.82 TPM:16.55
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