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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4201 A_BomoMSG_c14465_g1_i1
260bp
FPKM:3.25 TPM:1.69
4202 A_BomoMSG_c14466_g1_i1
212bp
FPKM:0.60 TPM:0.31
4203 A_BomoMSG_c14466_g1_i2
337bp
FPKM:1.39 TPM:0.72
4204 A_BomoMSG_c14467_g1_i1
442bp
 protein_halfway_[Bombyx_mori]
FPKM:1.03 TPM:0.53
4205 A_BomoMSG_c1446_g1_i1
424bp
 uncharacterized_protein_LOC101746464_isoform_X3_[Bombyx_mori]
FPKM:1.75 TPM:0.91
4206 A_BomoMSG_c14473_g1_i1
308bp
FPKM:4.17 TPM:2.17
4207 A_BomoMSG_c14474_g1_i1
260bp
FPKM:3.79 TPM:1.97
4208 A_BomoMSG_c14475_g1_i1
342bp
FPKM:4.68 TPM:2.44
4209 A_BomoMSG_c14478_g1_i1
251bp
FPKM:7.65 TPM:3.98
4210 A_BomoMSG_c14480_g1_i1
291bp
 neuropeptide_receptor_A11_[Bombyx_mori]
FPKM:4.25 TPM:2.21
4211 A_BomoMSG_c14482_g1_i1
386bp
FPKM:5.33 TPM:2.77
4212 A_BomoMSG_c14483_g1_i1
277bp
FPKM:2.35 TPM:1.22
4213 A_BomoMSG_c14485_g1_i1
294bp
FPKM:9.15 TPM:4.76
4214 A_BomoMSG_c14486_g1_i1
307bp
FPKM:1.14 TPM:0.60
4215 A_BomoMSG_c14486_g1_i2
241bp
FPKM:0.00 TPM:0.00
4216 A_BomoMSG_c14490_g1_i1
237bp
FPKM:2.71 TPM:1.41
4217 A_BomoMSG_c14491_g1_i1
461bp
 dedicator_of_cytokinesis_protein_7_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007264 P small GTPase mediated signal transduction
GO:0007596 P blood coagulation
GO:0043547 P positive regulation of GTPase activity
GO:0048471 C perinuclear region of cytoplasm
FPKM:3.35 TPM:1.74
4218 A_BomoMSG_c14491_g1_i2
387bp
 dedicator_of_cytokinesis_protein_7_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007264 P small GTPase mediated signal transduction
GO:0007596 P blood coagulation
GO:0043547 P positive regulation of GTPase activity
GO:0048471 C perinuclear region of cytoplasm
FPKM:0.16 TPM:0.08
4219 A_BomoMSG_c14492_g1_i1
213bp
FPKM:6.37 TPM:3.31
4220 A_BomoMSG_c14493_g1_i1
268bp
FPKM:2.02 TPM:1.05
4221 A_BomoMSG_c14494_g1_i1
217bp
 NADPH_oxidoreductase,_partial_[Bombyx_mori]
FPKM:0.86 TPM:0.45
4222 A_BomoMSG_c14495_g1_i1
388bp
 zinc_finger_protein_596_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:2.77 TPM:1.44
4223 A_BomoMSG_c14496_g1_i1
334bp
FPKM:5.21 TPM:2.71
4224 A_BomoMSG_c14497_g1_i1
257bp
FPKM:0.56 TPM:0.29
4225 A_BomoMSG_c14503_g1_i1
1047bp
 ubiquinol-cytochrome_c_reductase_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0008121 F ubiquinol-cytochrome-c reductase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016679 F oxidoreductase activity, acting on diphenols and related substances as donors
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
GO:1902600 P proton transmembrane transport
FPKM:38.45 TPM:20.00
4226 A_BomoMSG_c14506_g1_i1
313bp
 PREDICTED:_CREB-regulated_transcription_coactivator_2-like_[Papilio_xuthus]
FPKM:6.25 TPM:3.25
4227 A_BomoMSG_c14507_g1_i1
345bp
FPKM:7.07 TPM:3.68
4228 A_BomoMSG_c14508_g1_i1
450bp
FPKM:4.79 TPM:2.49
4229 A_BomoMSG_c14509_g1_i1
424bp
FPKM:3.72 TPM:1.93
4230 A_BomoMSG_c1450_g1_i1
286bp
 zinc_finger_protein_569_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0007423 P sensory organ development
GO:0007601 P visual perception
GO:0008407 P chaeta morphogenesis
GO:0008594 P photoreceptor cell morphogenesis
GO:0016360 P sensory organ precursor cell fate determination
GO:0042051 P compound eye photoreceptor development
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0043066 P negative regulation of apoptotic process
GO:0043425 F bHLH transcription factor binding
GO:0043565 F sequence-specific DNA binding
GO:0045464 P R8 cell fate specification
GO:0045465 P R8 cell differentiation
GO:0045872 P obsolete positive regulation of rhodopsin gene expression
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046530 P photoreceptor cell differentiation
GO:0046872 F metal ion binding
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0050896 P response to stimulus
FPKM:4.40 TPM:2.29
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