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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3991 A_BomoMSG_c14250_g1_i1
398bp
 probable_phospholipid-transporting_ATPase_IM_isoform_X4_[Bombyx_mori]
FPKM:4.35 TPM:2.26
3992 A_BomoMSG_c14253_g1_i1
255bp
FPKM:0.57 TPM:0.29
3993 A_BomoMSG_c14254_g1_i1
1029bp
 tubulin-folding_cofactor_B_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007023 P post-chaperonin tubulin folding pathway
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0030154 P cell differentiation
FPKM:17.44 TPM:9.07
3994 A_BomoMSG_c14255_g1_i1
387bp
FPKM:3.03 TPM:1.58
3995 A_BomoMSG_c14256_g1_i1
729bp
 GTPase_Era,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0000028 P ribosomal small subunit assembly
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0019843 F rRNA binding
GO:0042254 P ribosome biogenesis
GO:0043024 F ribosomal small subunit binding
GO:0044822 F RNA binding
GO:0045111 C intermediate filament cytoskeleton
FPKM:3.83 TPM:1.99
3996 A_BomoMSG_c14258_g1_i1
486bp
FPKM:5.35 TPM:2.78
3997 A_BomoMSG_c1425_g1_i1
251bp
 zinc_finger_protein_888-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:1.76 TPM:0.91
3998 A_BomoMSG_c1425_g1_i2
281bp
 zinc_finger_protein_888-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:1.83 TPM:0.95
3999 A_BomoMSG_c14260_g1_i1
268bp
 uncharacterized_protein_LOC110380051_[Helicoverpa_armigera]
FPKM:5.56 TPM:2.89
4000 A_BomoMSG_c14262_g1_i1
212bp
FPKM:2.77 TPM:1.44
4001 A_BomoMSG_c14263_g1_i1
759bp
 tectonin_beta-propeller_repeat-containing_protein_[Bombyx_mori]
GO:0000421 C autophagosome membrane
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005765 C lysosomal membrane
GO:0007031 P peroxisome organization
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0097352 P autophagosome maturation
FPKM:1.87 TPM:0.97
4002 A_BomoMSG_c14264_g1_i1
883bp
 fibrohexamerin-like_[Bombyx_mori]
FPKM:0.73 TPM:0.38
4003 A_BomoMSG_c14264_g1_i2
687bp
 fibrohexamerin-like_[Bombyx_mori]
FPKM:0.46 TPM:0.24
4004 A_BomoMSG_c14264_g1_i3
821bp
 fibrohexamerin-like_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4005 A_BomoMSG_c14265_g1_i1
423bp
 uncharacterized_protein_LOC101736479_isoform_X2_[Bombyx_mori]
FPKM:4.17 TPM:2.17
4006 A_BomoMSG_c14265_g2_i1
201bp
 uncharacterized_protein_LOC101736479_isoform_X2_[Bombyx_mori]
FPKM:9.79 TPM:5.09
4007 A_BomoMSG_c14266_g1_i1
305bp
FPKM:3.48 TPM:1.81
4008 A_BomoMSG_c14267_g1_i1
659bp
 PREDICTED:_BUB3-interacting_and_GLEBS_motif-containing_protein_ZNF207_isoform_X2_[Amyelois_transitella]
GO:0000070 P mitotic sister chromatid segregation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0001578 P microtubule bundle formation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0008017 F microtubule binding
GO:0008608 P attachment of spindle microtubules to kinetochore
GO:0046785 P microtubule polymerization
GO:0046872 F metal ion binding
GO:0050821 P protein stabilization
GO:0051301 P cell division
GO:0051983 P regulation of chromosome segregation
GO:0090307 P mitotic spindle assembly
GO:1990047 C spindle matrix
FPKM:6.16 TPM:3.21
4009 A_BomoMSG_c14267_g1_i2
1149bp
 BUB3-interacting_and_GLEBS_motif-containing_protein_ZNF207_isoform_X2_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0001578 P microtubule bundle formation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0008017 F microtubule binding
GO:0008608 P attachment of spindle microtubules to kinetochore
GO:0046785 P microtubule polymerization
GO:0046872 F metal ion binding
GO:0050821 P protein stabilization
GO:0051301 P cell division
GO:0051983 P regulation of chromosome segregation
GO:0090307 P mitotic spindle assembly
GO:1990047 C spindle matrix
FPKM:26.84 TPM:13.96
4010 A_BomoMSG_c14268_g1_i1
266bp
FPKM:7.20 TPM:3.75
4011 A_BomoMSG_c14269_g1_i1
810bp
 LOW_QUALITY_PROTEIN:_partitioning_defective_3_homolog_[Bombyx_mori]
FPKM:1.62 TPM:0.84
4012 A_BomoMSG_c14269_g1_i2
586bp
 LOW_QUALITY_PROTEIN:_partitioning_defective_3_homolog_[Bombyx_mori]
FPKM:1.81 TPM:0.94
4013 A_BomoMSG_c14270_g1_i1
351bp
FPKM:2.09 TPM:1.09
4014 A_BomoMSG_c14271_g1_i1
377bp
FPKM:2.90 TPM:1.51
4015 A_BomoMSG_c14272_g1_i1
225bp
FPKM:0.00 TPM:0.00
4016 A_BomoMSG_c14272_g1_i2
353bp
FPKM:2.66 TPM:1.38
4017 A_BomoMSG_c14275_g1_i1
379bp
 hypothetical_protein_KGM_212207_[Danaus_plexippus_plexippus]
FPKM:8.90 TPM:4.63
4018 A_BomoMSG_c14276_g1_i1
667bp
 tyrosine-protein_kinase_Btk29A_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007254 P JNK cascade
GO:0007300 P ovarian nurse cell to oocyte transport
GO:0007301 P female germline ring canal formation
GO:0007349 P cellularization
GO:0007391 P dorsal closure
GO:0007424 P open tracheal system development
GO:0007435 P salivary gland morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007485 P imaginal disc-derived male genitalia development
GO:0007619 P courtship behavior
GO:0008258 P head involution
GO:0008340 P determination of adult lifespan
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030036 P actin cytoskeleton organization
GO:0030717 P oocyte karyosome formation
GO:0030723 P ovarian fusome organization
GO:0030833 P regulation of actin filament polymerization
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0035556 P intracellular signal transduction
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042023 P DNA endoreduplication
GO:0042127 P regulation of cell population proliferation
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0045087 P innate immune response
GO:0045172 C germline ring canal
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0046960 P sensitization
GO:0048477 P oogenesis
GO:0071944 C cell periphery
FPKM:3.01 TPM:1.57
4019 A_BomoMSG_c14277_g1_i1
229bp
 TRASSc3,_partial_[Samia_cynthia]
FPKM:0.74 TPM:0.39
4020 A_BomoMSG_c14278_g1_i1
227bp
FPKM:2.28 TPM:1.19
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